{"id":"https://openalex.org/W2151579561","doi":"https://doi.org/10.1186/2041-1480-1-4","title":"Applying the functional abnormality ontology pattern to anatomical functions","display_name":"Applying the functional abnormality ontology pattern to anatomical functions","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W2151579561","doi":"https://doi.org/10.1186/2041-1480-1-4","mag":"2151579561","pmid":"https://pubmed.ncbi.nlm.nih.gov/20618982"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-1-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-1-4","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-1-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-1-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043808311","display_name":"Robert Hoehndorf","orcid":"https://orcid.org/0000-0001-8149-5890"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Robert Hoehndorf","raw_affiliation_strings":["Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany. leechuck@leechuck.de","Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany. leechuck@leechuck.de","institution_ids":[]},{"raw_affiliation_string":"Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038745720","display_name":"Axel-Cyrille Ngonga Ngomo","orcid":"https://orcid.org/0000-0001-7112-3516"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Axel-Cyrille Ngonga Ngomo","raw_affiliation_strings":["Department of Computer Science, University of Leipzig, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Leipzig, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080488747","display_name":"Janet Kelso","orcid":"https://orcid.org/0000-0002-3618-322X"},"institutions":[{"id":"https://openalex.org/I4210118560","display_name":"Max Planck Institute for Evolutionary Anthropology","ror":"https://ror.org/02a33b393","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210118560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Janet Kelso","raw_affiliation_strings":["Department for Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Department for Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany","institution_ids":["https://openalex.org/I4210118560"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5043808311"],"corresponding_institution_ids":["https://openalex.org/I926574661"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":953,"currency":"EUR","value_usd":1027},"fwci":1.7619,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.84452293,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"1","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9613999724388123,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7839653491973877},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7324957847595215},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.6229466199874878},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.6080371141433716},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5249485969543457},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4993555545806885},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4589889943599701},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3473537564277649},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.34316933155059814},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33073562383651733},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.3306778073310852},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.27163001894950867},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.2543036639690399},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.21842685341835022},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10900893807411194}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7839653491973877},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7324957847595215},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.6229466199874878},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6080371141433716},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5249485969543457},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4993555545806885},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4589889943599701},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3473537564277649},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.34316933155059814},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33073562383651733},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.3306778073310852},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.27163001894950867},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.2543036639690399},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.21842685341835022},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10900893807411194},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1186/2041-1480-1-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-1-4","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-1-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:20618982","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20618982","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:aber.ac.uk:publications/a98b359e-c66c-4907-8f4f-56ff651e1b22","is_oa":false,"landing_page_url":"http://hdl.handle.net/2160/10969","pdf_url":null,"source":{"id":"https://openalex.org/S4306401660","display_name":"Aberystwyth Research portal (Aberystwyth University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16038530","host_organization_name":"Aberystwyth University","host_organization_lineage":["https://openalex.org/I16038530"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:doaj.org/article:5642a7ea06dc4ddfaeb5caba9b609cfb","is_oa":true,"landing_page_url":"https://doaj.org/article/5642a7ea06dc4ddfaeb5caba9b609cfb","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, Vol 1, Iss 1, p 4 (2010)","raw_type":"article"},{"id":"pmh:oai:edoc.mpg.de:522126","is_oa":false,"landing_page_url":"http://edoc.mpg.de/522126","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Biomedical Semantics, v.1, 1-15 (2010)","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2895731","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2895731","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_1552799","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-000F-F6A5-B","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of biomedical semantics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-1-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-1-4","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-1-4","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.4699999988079071,"display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322434","display_name":"Max-Planck-Gesellschaft","ror":"https://ror.org/01hhn8329"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2151579561.pdf","grobid_xml":"https://content.openalex.org/works/W2151579561.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W171784999","https://openalex.org/W1571433676","https://openalex.org/W1661295559","https://openalex.org/W1757909678","https://openalex.org/W2022451103","https://openalex.org/W2051532009","https://openalex.org/W2084998011","https://openalex.org/W2099218891","https://openalex.org/W2100490186","https://openalex.org/W2103017472","https://openalex.org/W2103260426","https://openalex.org/W2120580583","https://openalex.org/W2121939662","https://openalex.org/W2123171788","https://openalex.org/W2136410628","https://openalex.org/W2156622158","https://openalex.org/W2163670493","https://openalex.org/W2163685645","https://openalex.org/W2312867617","https://openalex.org/W2316212083","https://openalex.org/W2322561857","https://openalex.org/W3129696931","https://openalex.org/W4230432057","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W334115264","https://openalex.org/W2102229151","https://openalex.org/W2962767719","https://openalex.org/W2360988564","https://openalex.org/W2191623197","https://openalex.org/W1582862293","https://openalex.org/W2373434917","https://openalex.org/W263755996","https://openalex.org/W1995689060","https://openalex.org/W2911326759"],"abstract_inverted_index":{"The":[0],"source":[1],"code":[2],"and":[3],"results":[4],"of":[5],"our":[6],"analysis":[7],"are":[8],"available":[9],"at":[10],"http://bioonto.de.":[11]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
