{"id":"https://openalex.org/W2096953947","doi":"https://doi.org/10.1186/1758-2946-7-s1-s14","title":"Enhancing of chemical compound and drug name recognition using representative tag scheme and fine-grained tokenization","display_name":"Enhancing of chemical compound and drug name recognition using representative tag scheme and fine-grained tokenization","publication_year":2015,"publication_date":"2015-01-19","ids":{"openalex":"https://openalex.org/W2096953947","doi":"https://doi.org/10.1186/1758-2946-7-s1-s14","mag":"2096953947","pmid":"https://pubmed.ncbi.nlm.nih.gov/25810771"},"language":"en","primary_location":{"id":"doi:10.1186/1758-2946-7-s1-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-7-s1-s14","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-7-S1-S14","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-7-S1-S14","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109042526","display_name":"Hong-Jie Dai","orcid":"https://orcid.org/0000-0002-1516-7255"},"institutions":[{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Hong-Jie Dai","raw_affiliation_strings":["Graduate Institute of Biomedical Informatics, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan","Graduate Institute of Biomedical Informatics,College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan"],"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Informatics, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan","institution_ids":["https://openalex.org/I47519274"]},{"raw_affiliation_string":"Graduate Institute of Biomedical Informatics,College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan","institution_ids":["https://openalex.org/I47519274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016587469","display_name":"Po\u2010Ting Lai","orcid":"https://orcid.org/0000-0003-2025-318X"},"institutions":[{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I84653119","display_name":"Academia Sinica","ror":"https://ror.org/05bxb3784","country_code":"TW","type":"facility","lineage":["https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Po-Ting Lai","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Taipei, Taiwan","Institute of Information Science,Academia Sinica,,Taipei,,Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]},{"raw_affiliation_string":"Institute of Information Science,Academia Sinica,,Taipei,,Taiwan","institution_ids":["https://openalex.org/I84653119"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018928362","display_name":"Yung\u2010Chun Chang","orcid":"https://orcid.org/0000-0002-9634-8380"},"institutions":[{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yung-Chun Chang","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Taipei, Taiwan ; Department of Information Management, National Taiwan University, Taipei, Taiwan","Institute of Information Science, Academia Sinica, Taipei, Taiwan","Department of Information Management, National Taiwan University, Taipei, Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan ; Department of Information Management, National Taiwan University, Taipei, Taiwan","institution_ids":[]},{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]},{"raw_affiliation_string":"Department of Information Management, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030771512","display_name":"Richard Tzong\u2010Han Tsai","orcid":"https://orcid.org/0000-0003-0513-107X"},"institutions":[{"id":"https://openalex.org/I22265921","display_name":"National Central University","ror":"https://ror.org/00944ve71","country_code":"TW","type":"education","lineage":["https://openalex.org/I22265921"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Richard Tzong-Han Tsai","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Central University, Taoyuan, Taiwan","[Dept. of Computer Science and Information Engineering, National Central University, Taoyuan, Taiwan]"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Central University, Taoyuan, Taiwan","institution_ids":["https://openalex.org/I22265921"]},{"raw_affiliation_string":"[Dept. of Computer Science and Information Engineering, National Central University, Taoyuan, Taiwan]","institution_ids":["https://openalex.org/I22265921"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5109042526"],"corresponding_institution_ids":["https://openalex.org/I47519274"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":4.2992,"has_fulltext":true,"cited_by_count":76,"citation_normalized_percentile":{"value":0.9497766,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"7","issue":"S1","first_page":"S14","last_page":"S14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lexical-analysis","display_name":"Lexical analysis","score":0.9556239247322083},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.790981650352478},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6129822731018066},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5304524302482605},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5268629789352417},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.48028847575187683},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4706993103027344},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4455808997154236},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.4399752616882324},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38273361325263977},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3822711706161499},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.328509658575058}],"concepts":[{"id":"https://openalex.org/C176982825","wikidata":"https://www.wikidata.org/wiki/Q835922","display_name":"Lexical analysis","level":2,"score":0.9556239247322083},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.790981650352478},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6129822731018066},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5304524302482605},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5268629789352417},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.48028847575187683},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4706993103027344},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4455808997154236},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.4399752616882324},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38273361325263977},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3822711706161499},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.328509658575058},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1758-2946-7-s1-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-7-s1-s14","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-7-S1-S14","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:25810771","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25810771","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3334607","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4331690","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1758-2946-7-s1-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-7-s1-s14","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-7-S1-S14","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096953947.pdf","grobid_xml":"https://content.openalex.org/works/W2096953947.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1524134026","https://openalex.org/W1971678616","https://openalex.org/W2049240985","https://openalex.org/W2095596879","https://openalex.org/W2101553882","https://openalex.org/W2107005506","https://openalex.org/W2127008962","https://openalex.org/W2127239015","https://openalex.org/W2129113459","https://openalex.org/W2145870108","https://openalex.org/W2147880316","https://openalex.org/W2154142897","https://openalex.org/W2159640576","https://openalex.org/W2163303745","https://openalex.org/W2163377725","https://openalex.org/W2166468803","https://openalex.org/W2213189003","https://openalex.org/W2510847435","https://openalex.org/W6600595061"],"related_works":["https://openalex.org/W4386014872","https://openalex.org/W4361193986","https://openalex.org/W1847536016","https://openalex.org/W3149094754","https://openalex.org/W3172681236","https://openalex.org/W2148703997","https://openalex.org/W4366851046","https://openalex.org/W2033371749","https://openalex.org/W2891935779","https://openalex.org/W3217218495"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":4}],"updated_date":"2026-03-09T08:58:05.943551","created_date":"2025-10-10T00:00:00"}