{"id":"https://openalex.org/W2106455071","doi":"https://doi.org/10.1186/1758-2946-6-s1-o13","title":"Looking over the rim: algorithms for cheminformatics from computer scientists","display_name":"Looking over the rim: algorithms for cheminformatics from computer scientists","publication_year":2014,"publication_date":"2014-03-01","ids":{"openalex":"https://openalex.org/W2106455071","doi":"https://doi.org/10.1186/1758-2946-6-s1-o13","mag":"2106455071","pmid":"https://pubmed.ncbi.nlm.nih.gov/24765111"},"language":"en","primary_location":{"id":"doi:10.1186/1758-2946-6-s1-o13","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-6-s1-o13","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-6-S1-O13","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-6-S1-O13","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110252252","display_name":"Thorsten Meinl","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Thorsten Meinl","raw_affiliation_strings":["KNIME.com, AG, Zurich, 8005 Switzerland","KNIME.com AG, Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"KNIME.com, AG, Zurich, 8005 Switzerland","institution_ids":[]},{"raw_affiliation_string":"KNIME.com AG, Zurich, Switzerland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062308622","display_name":"Bernd Wiswedel","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bernd Wiswedel","raw_affiliation_strings":["KNIME.com, AG, Zurich, 8005 Switzerland","KNIME.com AG, Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"KNIME.com, AG, Zurich, 8005 Switzerland","institution_ids":[]},{"raw_affiliation_string":"KNIME.com AG, Zurich, Switzerland","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035270195","display_name":"Michael R. Berthold","orcid":"https://orcid.org/0000-0001-9095-3283"},"institutions":[{"id":"https://openalex.org/I189712700","display_name":"University of Konstanz","ror":"https://ror.org/0546hnb39","country_code":"DE","type":"education","lineage":["https://openalex.org/I189712700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael R Berthold","raw_affiliation_strings":["KNIME.com, AG, Zurich, 8005 Switzerland ; University of Konstanz, Konstanz, 78457 Germany","KNIME.com AG, Zurich, Switzerland","University of Konstanz, Konstanz, Germany"],"affiliations":[{"raw_affiliation_string":"KNIME.com, AG, Zurich, 8005 Switzerland ; University of Konstanz, Konstanz, 78457 Germany","institution_ids":[]},{"raw_affiliation_string":"KNIME.com AG, Zurich, Switzerland","institution_ids":[]},{"raw_affiliation_string":"University of Konstanz, Konstanz, Germany","institution_ids":["https://openalex.org/I189712700"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5110252252"],"corresponding_institution_ids":[],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":0.3681,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.6573615,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"6","issue":"S1","first_page":"O13","last_page":"O13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12292","display_name":"Graph Theory and Algorithms","score":0.9664999842643738,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cheminformatics","display_name":"Cheminformatics","score":0.9474355578422546},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6819233298301697},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5369688272476196},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35540032386779785},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24803155660629272},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09312042593955994}],"concepts":[{"id":"https://openalex.org/C68762167","wikidata":"https://www.wikidata.org/wiki/Q910164","display_name":"Cheminformatics","level":2,"score":0.9474355578422546},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6819233298301697},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5369688272476196},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35540032386779785},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24803155660629272},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09312042593955994}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1758-2946-6-s1-o13","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-6-s1-o13","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-6-S1-O13","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:24765111","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24765111","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2972205","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3980169","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1758-2946-6-s1-o13","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-6-s1-o13","pdf_url":"https://jcheminf.biomedcentral.com/track/pdf/10.1186/1758-2946-6-S1-O13","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2106455071.pdf","grobid_xml":"https://content.openalex.org/works/W2106455071.grobid-xml"},"referenced_works_count":3,"referenced_works":["https://openalex.org/W102722232","https://openalex.org/W2046278225","https://openalex.org/W2129848288"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1573015311","https://openalex.org/W1570419641","https://openalex.org/W4386509167","https://openalex.org/W2889938001","https://openalex.org/W4293771607","https://openalex.org/W3165034028","https://openalex.org/W2296499206","https://openalex.org/W2917626761"],"abstract_inverted_index":{"In":[0,50],"recent":[1],"years":[2],"a":[3,66,81,123,128,174,207],"number":[4],"of":[5,33,58,83,111,115,135,176,206],"methods":[6],"were":[7],"invented":[8],"in":[9,20,46,80,185,209],"the":[10,21,47,91,109,133,145,153,197,204],"data":[11],"mining/machine":[12],"learning":[13],"field":[14],"that":[15,70],"have":[16],"received":[17],"little":[18],"attention":[19],"cheminformatics":[22,48],"world":[23],"even":[24,38],"though":[25],"they":[26],"offer":[27],"interesting":[28],"properties":[29,166,178],"for":[30,101],"these":[31,59],"types":[32],"applications":[34],"as":[35,139,141],"well":[36],"-":[37],"compared":[39],"to":[40,55,76,89,158],"some":[41,97],"similar":[42,160],"algorithms":[43],"published":[44],"primarily":[45],"space.":[49],"this":[51],"talk":[52],"we":[53],"want":[54],"highlight":[56],"three":[57],"algorithms/approaches.":[60],"The":[61,103,148],"first":[62,146],"is":[63,86,137],"MoSS":[64],"[1],":[65],"frequent":[67],"subgraph":[68],"miner":[69],"can":[71,126,202],"not":[72,120,138],"only":[73,121],"be":[74,127],"used":[75],"find":[77,159],"common":[78],"substructures":[79],"set":[82,175],"molecules":[84,116,161],"but":[85,131,156],"also":[87],"able":[88],"compute":[90],"MCSS":[92],"very":[93],"fast":[94],"and":[95,179],"has":[96],"extension":[98],"especially":[99],"suited":[100],"molecules.":[102],"second":[104],"presented":[105],"approach":[106],"deals":[107],"with":[108],"problem":[110],"finding":[112,122],"diverse":[113,124],"subsets":[114],"[2].":[117],"Quite":[118],"interestingly,":[119],"subset":[125],"challenging":[129],"task":[130],"already":[132],"definition":[134],"diversity":[136],"straight-forward":[140],"it":[142],"seems":[143],"at":[144,164],"glance.":[147],"third":[149],"algorithm":[150],"goes":[151],"along":[152],"same":[154],"lines":[155],"tries":[157],"by":[162,194],"looking":[163],"their":[165],"from":[167,199],"so-called":[168,195],"parallel":[169],"universes[3].":[170],"Each":[171],"universe":[172,187,201],"contains":[173],"related":[177],"partial":[180],"predictive":[181],"models":[182,198,208],"are":[183],"built":[184],"each":[186],"separately.":[188],"Through":[189],"interactive":[190],"model":[191],"construction,":[192],"e.g.":[193],"Neighbourgrams,":[196],"one":[200],"aid":[203],"construction":[205],"other":[210],"universes.":[211]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
