{"id":"https://openalex.org/W2141666186","doi":"https://doi.org/10.1186/1758-2946-5-46","title":"CH5M3D: an HTML5 program for creating 3D molecular structures","display_name":"CH5M3D: an HTML5 program for creating 3D molecular structures","publication_year":2013,"publication_date":"2013-11-18","ids":{"openalex":"https://openalex.org/W2141666186","doi":"https://doi.org/10.1186/1758-2946-5-46","mag":"2141666186","pmid":"https://pubmed.ncbi.nlm.nih.gov/24246004"},"language":"en","primary_location":{"id":"doi:10.1186/1758-2946-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-5-46","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/1758-2946-5-46","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/1758-2946-5-46","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019010455","display_name":"Clarke W. Earley","orcid":null},"institutions":[{"id":"https://openalex.org/I891261516","display_name":"Kent State University at Stark","ror":"https://ror.org/00gxmhc57","country_code":"US","type":"education","lineage":["https://openalex.org/I891261516"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Clarke W Earley","raw_affiliation_strings":["Department of Chemistry, Kent State University at Stark, 6000 Frank Ave, NW, North Canton, OH 44720, USA. cearley@kent.edu","Department of Chemistry, Kent State University at Stark, 6000 Frank Ave. NW, North Canton, OH 44720, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Kent State University at Stark, 6000 Frank Ave, NW, North Canton, OH 44720, USA. cearley@kent.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Chemistry, Kent State University at Stark, 6000 Frank Ave. NW, North Canton, OH 44720, USA","institution_ids":["https://openalex.org/I891261516"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5019010455"],"corresponding_institution_ids":["https://openalex.org/I891261516"],"apc_list":{"value":1290,"currency":"GBP","value_usd":1582},"apc_paid":{"value":1290,"currency":"GBP","value_usd":1582},"fwci":1.0386,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.81782627,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"5","issue":"1","first_page":"46","last_page":"46"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10798","display_name":"Crystallography and molecular interactions","score":0.3407999873161316,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10798","display_name":"Crystallography and molecular interactions","score":0.3407999873161316,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12327","display_name":"Various Chemistry Research Topics","score":0.265500009059906,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.03550000116229057,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.8578831553459167},{"id":"https://openalex.org/keywords/html5","display_name":"HTML5","score":0.8371280431747437},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7851285934448242},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.6487230062484741},{"id":"https://openalex.org/keywords/web-page","display_name":"Web page","score":0.5330881476402283},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.48154786229133606},{"id":"https://openalex.org/keywords/unobtrusive-javascript","display_name":"Unobtrusive JavaScript","score":0.45658794045448303},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.41414710879325867},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.39584052562713623},{"id":"https://openalex.org/keywords/rich-internet-application","display_name":"Rich Internet application","score":0.18262231349945068},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13511914014816284}],"concepts":[{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.8578831553459167},{"id":"https://openalex.org/C84063617","wikidata":"https://www.wikidata.org/wiki/Q2053","display_name":"HTML5","level":2,"score":0.8371280431747437},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7851285934448242},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.6487230062484741},{"id":"https://openalex.org/C21959979","wikidata":"https://www.wikidata.org/wiki/Q36774","display_name":"Web page","level":2,"score":0.5330881476402283},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.48154786229133606},{"id":"https://openalex.org/C198240166","wikidata":"https://www.wikidata.org/wiki/Q2298909","display_name":"Unobtrusive JavaScript","level":4,"score":0.45658794045448303},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.41414710879325867},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.39584052562713623},{"id":"https://openalex.org/C103048170","wikidata":"https://www.wikidata.org/wiki/Q725485","display_name":"Rich Internet application","level":3,"score":0.18262231349945068},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13511914014816284}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1758-2946-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-5-46","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/1758-2946-5-46","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},{"id":"pmid:24246004","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24246004","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of cheminformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3145716","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4177146","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1758-2946-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1758-2946-5-46","pdf_url":"https://jcheminf.biomedcentral.com/counter/pdf/10.1186/1758-2946-5-46","source":{"id":"https://openalex.org/S180838163","display_name":"Journal of Cheminformatics","issn_l":"1758-2946","issn":["1758-2946"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Cheminformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311890","display_name":"Kent State University","ror":"https://ror.org/049pfb863"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2141666186.pdf","grobid_xml":"https://content.openalex.org/works/W2141666186.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1587076058","https://openalex.org/W1968733986","https://openalex.org/W2013197396","https://openalex.org/W2028046413","https://openalex.org/W2049338450","https://openalex.org/W2079464453","https://openalex.org/W2080349144","https://openalex.org/W2120869341","https://openalex.org/W2169678694"],"related_works":["https://openalex.org/W4390142841","https://openalex.org/W2137830470","https://openalex.org/W4247132648","https://openalex.org/W2547251642","https://openalex.org/W4231655217","https://openalex.org/W2795601048","https://openalex.org/W2621177934","https://openalex.org/W3009852816","https://openalex.org/W2403324299","https://openalex.org/W2914791830"],"abstract_inverted_index":{"BACKGROUND:":[0],"While":[1,61],"a":[2,35,82,118,136,184,249,257],"number":[3],"of":[4,15,20,46,56,108,114,175,177,187,201,207,232],"programs":[5],"and":[6,87,129,144,151,173,190,262,286],"web-based":[7,47],"applications":[8,48],"are":[9,95,158,192],"available":[10,225,288],"for":[11,42,70,85,205,228],"the":[12,23,43,98,103,123,165,170,202,229,279],"interactive":[13,236],"display":[14,113],"3-dimensional":[16,237],"molecular":[17,90,203,238],"structures,":[18],"few":[19,185],"these":[21,27],"provide":[22],"ability":[24],"to":[25,40,78,111,160,194,245],"edit":[26],"structures.":[28,91,239],"For":[29],"this":[30,67,241],"reason,":[31],"we":[32],"have":[33],"developed":[34],"library":[36,221,242,274],"written":[37],"in":[38,65],"JavaScript":[39,104,220],"allow":[41,112],"simple":[44,230],"creation":[45,174,206,231],"that":[49,226],"should":[50],"run":[51],"on":[52,97,117,256],"any":[53,266],"browser":[54],"capable":[55],"rendering":[57],"HTML5":[58,99],"web":[59,166,208,233,247,250,258],"pages.":[60],"our":[62],"primary":[63],"interest":[64],"developing":[66],"application":[68,84],"was":[69],"educational":[71],"use,":[72],"it":[73],"may":[74],"also":[75],"prove":[76],"useful":[77],"researchers":[79],"who":[80],"want":[81],"light-weight":[83,216],"viewing":[86],"editing":[88],"small":[89],"RESULTS:":[92],"Molecular":[93],"compounds":[94],"drawn":[96],"Canvas":[100],"element,":[101],"with":[102,182,210],"code":[105],"making":[106],"use":[107],"standard":[109],"techniques":[110],"three-dimensional":[115],"structures":[116,162,178],"two-dimensional":[119],"canvas.":[120],"Information":[121],"about":[122,153],"structure":[124],"(bond":[125],"lengths,":[126],"bond":[127],"angles,":[128],"dihedral":[130],"angles)":[131],"can":[132,146,179,198],"be":[133,147,180],"obtained":[134],"using":[135],"mouse":[137],"or":[138,149,168,269],"other":[139],"pointing":[140],"device.":[141],"Both":[142],"atoms":[143],"bonds":[145,154],"added":[148],"deleted,":[150],"rotation":[152],"is":[155,243,252,260,287],"allowed.":[156],"Routines":[157],"provided":[159,193],"read":[161],"either":[163],"from":[164,169,289],"server":[167,251,259],"user's":[171],"computer,":[172],"galleries":[176],"accomplished":[181],"only":[183],"lines":[186],"code.":[188],"Documentation":[189],"examples":[191],"demonstrate":[195],"how":[196],"users":[197],"access":[199],"all":[200],"information":[204],"pages":[209,234],"more":[211],"advanced":[212],"features.":[213],"CONCLUSIONS:":[214],"A":[215],"(\u2248":[217],"75":[218],"kb)":[219],"has":[222,275],"been":[223,276],"made":[224],"allows":[227],"containing":[235],"Although":[240],"designed":[244],"create":[246],"pages,":[248],"not":[253,264],"required.":[254],"Installation":[255],"straightforward":[261],"does":[263],"require":[265],"server-side":[267],"modules":[268],"special":[270],"permissions.":[271],"The":[272],"ch5m3d.js":[273],"released":[277],"under":[278],"GNU":[280],"GPL":[281],"version":[282],"3":[283],"open-source":[284],"license":[285],"http://sourceforge.net/projects/ch5m3d/.":[290]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}