{"id":"https://openalex.org/W2129295606","doi":"https://doi.org/10.1186/1756-0381-5-6","title":"How do alignment programs perform on sequencing data with varying qualities and from repetitive regions?","display_name":"How do alignment programs perform on sequencing data with varying qualities and from repetitive regions?","publication_year":2012,"publication_date":"2012-06-18","ids":{"openalex":"https://openalex.org/W2129295606","doi":"https://doi.org/10.1186/1756-0381-5-6","mag":"2129295606","pmid":"https://pubmed.ncbi.nlm.nih.gov/22709551"},"language":"en","primary_location":{"id":"doi:10.1186/1756-0381-5-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-6","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101821823","display_name":"Xiaoqing Yu","orcid":"https://orcid.org/0000-0003-3572-5821"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaoqing Yu","raw_affiliation_strings":["Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA. ssun5211@yahoo.com","Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA. ssun5211@yahoo.com","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068964605","display_name":"Kishore Guda","orcid":"https://orcid.org/0000-0001-8218-7830"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kishore Guda","raw_affiliation_strings":["Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA","Department of Medicine, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Department of Medicine, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103047354","display_name":"Joseph Willis","orcid":"https://orcid.org/0000-0003-1782-886X"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Willis","raw_affiliation_strings":["Department of Pathology, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109844281","display_name":"Martina Veigl","orcid":null},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martina Veigl","raw_affiliation_strings":["Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038070558","display_name":"Zhenghe Wang","orcid":"https://orcid.org/0000-0003-4585-677X"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhenghe Wang","raw_affiliation_strings":["J. Craig Venter Institute, 10355 Science Center Dr, San Diego, CA, 92121, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute, 10355 Science Center Dr, San Diego, CA, 92121, USA","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052550785","display_name":"Sanford D. Markowitz","orcid":"https://orcid.org/0000-0001-5369-5254"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanford Markowitz","raw_affiliation_strings":["Department of Medicine, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030017379","display_name":"Mark D. Adams","orcid":"https://orcid.org/0000-0003-3161-7460"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark D Adams","raw_affiliation_strings":["J. Craig Venter Institute, 10355 Science Center Dr, San Diego, CA, 92121, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute, 10355 Science Center Dr, San Diego, CA, 92121, USA","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061906014","display_name":"Shuying Sun","orcid":"https://orcid.org/0000-0002-8449-7370"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shuying Sun","raw_affiliation_strings":["Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA","Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5061906014"],"corresponding_institution_ids":["https://openalex.org/I58956616"],"apc_list":{"value":2490,"currency":"USD","value_usd":2490},"apc_paid":{"value":2490,"currency":"USD","value_usd":2490},"fwci":2.5773,"has_fulltext":true,"cited_by_count":43,"citation_normalized_percentile":{"value":0.90384479,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"6","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.0034000000450760126,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.00139999995008111,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7488594651222229},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.594992995262146},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.5676552653312683},{"id":"https://openalex.org/keywords/trimming","display_name":"Trimming","score":0.5542640686035156},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.49875569343566895},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.45869180560112},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.43468955159187317},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3637846112251282},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.328385591506958},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09947308897972107},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.09407064318656921}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7488594651222229},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.594992995262146},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.5676552653312683},{"id":"https://openalex.org/C56951928","wikidata":"https://www.wikidata.org/wiki/Q3539213","display_name":"Trimming","level":2,"score":0.5542640686035156},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.49875569343566895},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.45869180560112},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.43468955159187317},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3637846112251282},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.328385591506958},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09947308897972107},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.09407064318656921},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/1756-0381-5-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-6","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:22709551","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22709551","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:doaj.org/article:c9fb9f0a2210481b990ddd203aaa6dcf","is_oa":false,"landing_page_url":"https://doaj.org/article/c9fb9f0a2210481b990ddd203aaa6dcf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 5, Iss 1, p 6 (2012)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3414812","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3414812","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1756-0381-5-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-6","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2129295606.pdf","grobid_xml":"https://content.openalex.org/works/W2129295606.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W2000586119","https://openalex.org/W2055043387","https://openalex.org/W2074231493","https://openalex.org/W2093931624","https://openalex.org/W2097341408","https://openalex.org/W2097862362","https://openalex.org/W2103441770","https://openalex.org/W2112113834","https://openalex.org/W2115872073","https://openalex.org/W2120293208","https://openalex.org/W2121762798","https://openalex.org/W2123750815","https://openalex.org/W2124985265","https://openalex.org/W2128591967","https://openalex.org/W2129713651","https://openalex.org/W2134924833","https://openalex.org/W2139747296","https://openalex.org/W2139760555","https://openalex.org/W2142619120","https://openalex.org/W2143124024","https://openalex.org/W2153527981","https://openalex.org/W2153805608","https://openalex.org/W2158322625","https://openalex.org/W2161488606","https://openalex.org/W2168303240","https://openalex.org/W4247053599"],"related_works":["https://openalex.org/W2467235537","https://openalex.org/W4243755427","https://openalex.org/W1493074871","https://openalex.org/W2222099502","https://openalex.org/W2128287377","https://openalex.org/W1979067309","https://openalex.org/W2149905047","https://openalex.org/W2135768893","https://openalex.org/W176219849","https://openalex.org/W3021414116"],"abstract_inverted_index":{"BACKGROUND:":[0],"Next-generation":[1],"sequencing":[2,24,109,127,254,270],"technologies":[3],"generate":[4],"a":[5,16,43,242],"significant":[6],"number":[7,164],"of":[8,18,42,79,92,100,105,117,165,190,245,253,286],"short":[9],"reads":[10,25,130,167,210,219,230],"that":[11,131,137,155,218],"are":[12,36,96],"utilized":[13,281],"to":[14,27,59,75,187,224,268,282],"address":[15],"variety":[17],"biological":[19],"questions.":[20],"However,":[21,182],"quite":[22],"often,":[23],"tend":[26,223],"have":[28,132,138,152],"low":[29,140,158,179,195],"quality":[30,135,141,159,180,196],"at":[31],"the":[32,39,72,77,115,163,170,188,200,251,284],"3'":[33],"end":[34],"and":[35,68,87,114,168,204,228,259],"generated":[37,273],"from":[38,211,220,260,274],"repetitive":[40,212,221,261],"regions":[41,222],"genome.":[44],"It":[45,277],"is":[46,184],"unclear":[47],"how":[48],"different":[49,55,93,173,269,275],"alignment":[50,94,147,236,248,288],"programs":[51,148],"perform":[52,149],"under":[53],"these":[54],"cases.":[56],"In":[57],"order":[58],"investigate":[60],"this":[61],"question,":[62],"we":[63],"use":[64],"both":[65],"real":[66,108],"data":[67,70,110,128,191,216,255,271],"simulated":[69,118],"with":[71,129,231,256],"above":[73],"issues":[74],"evaluate":[76],"performance":[78,91,285],"four":[80,146],"commonly":[81,246],"used":[82,247],"algorithms:":[83],"SOAP2,":[84],"Bowtie,":[85],"BWA,":[86],"Novoalign.":[88],"METHODS:":[89],"The":[90],"algorithms":[95,249],"measured":[97],"in":[98,250],"terms":[99],"concordance":[101,201],"between":[102,202],"any":[103],"pair":[104],"aligners":[106,174],"(for":[107],"without":[111],"known":[112],"truth)":[113],"accuracy":[116],"read":[119],"alignment.":[120],"RESULTS:":[121],"Our":[122,263],"results":[123],"show":[124,217],"that,":[125],"for":[126,178,208],"relatively":[133],"good":[134],"or":[136],"had":[139],"bases":[142],"trimmed":[143],"off,":[144],"all":[145],"similarly.":[150],"We":[151],"also":[153,279],"demonstrated":[154],"trimming":[156],"off":[157,194],"ends":[160,197],"markedly":[161],"increases":[162,199],"aligned":[166,226],"improves":[169],"consistency":[171],"among":[172],"as":[175],"well,":[176],"especially":[177],"data.":[181],"Novoalign":[183,203],"more":[185],"sensitive":[186],"improvement":[189],"quality.":[192],"Trimming":[193],"significantly":[198],"other":[205,287],"aligners.":[206],"As":[207],"aligning":[209],"regions,":[213],"our":[214],"simulation":[215],"be":[225,266,280],"incorrectly,":[227],"suppressing":[229],"multiple":[232],"hits":[233],"can":[234,265,278],"improve":[235],"accuracy.":[237],"CONCLUSIONS:":[238],"This":[239],"study":[240,283],"provides":[241],"systematic":[243],"comparison":[244],"context":[252],"varying":[257],"qualities":[258],"regions.":[262],"approach":[264],"applied":[267],"sets":[272],"platforms.":[276],"programs.":[289]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
