{"id":"https://openalex.org/W2164381236","doi":"https://doi.org/10.1186/1756-0381-5-1","title":"Caipirini: using gene sets to rank literature","display_name":"Caipirini: using gene sets to rank literature","publication_year":2012,"publication_date":"2012-02-01","ids":{"openalex":"https://openalex.org/W2164381236","doi":"https://doi.org/10.1186/1756-0381-5-1","mag":"2164381236","pmid":"https://pubmed.ncbi.nlm.nih.gov/22297131"},"language":"en","primary_location":{"id":"doi:10.1186/1756-0381-5-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-1","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-1","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039053742","display_name":"Theodoros Soldatos","orcid":"https://orcid.org/0000-0001-6051-6605"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Theodoros G Soldatos","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. sean@odonoghuelab.org","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. sean@odonoghuelab.org","institution_ids":[]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061545147","display_name":"S\u00e9an O\u2019Donoghue","orcid":"https://orcid.org/0000-0001-9520-6623"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]},{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU","DE"],"is_corresponding":false,"raw_author_name":"Se\u00e1n I O'Donoghue","raw_affiliation_strings":["Division of Mathematics, Informatics, and Statistics, CSIRO, Sydney, Australia","Garvan Institute of Medical Research, Sydney, Australia","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Division of Mathematics, Informatics, and Statistics, CSIRO, Sydney, Australia","institution_ids":["https://openalex.org/I1292875679"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Sydney, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088017410","display_name":"Venkata Satagopam","orcid":"https://orcid.org/0000-0002-6532-5880"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Venkata P Satagopam","raw_affiliation_strings":["Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063632942","display_name":"Adriano Barbosa-Silva","orcid":"https://orcid.org/0000-0002-5260-2607"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]},{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]},{"id":"https://openalex.org/I52418104","display_name":"Universidade Federal do Paran\u00e1","ror":"https://ror.org/05syd6y78","country_code":"BR","type":"education","lineage":["https://openalex.org/I52418104"]}],"countries":["BR","DE"],"is_corresponding":false,"raw_author_name":"Adriano Barbosa-Silva","raw_affiliation_strings":["Bioinformatics Graduate Program, Federal University of Paran\u00e1 - UFPR (SEPT), Curitiba, PR, Brazil","Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine, Berlin, Germany","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Graduate Program, Federal University of Paran\u00e1 - UFPR (SEPT), Curitiba, PR, Brazil","institution_ids":["https://openalex.org/I52418104"]},{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088991393","display_name":"Georgios A. Pavlopoulos","orcid":"https://orcid.org/0000-0002-4577-8276"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","DE"],"is_corresponding":false,"raw_author_name":"Georgios A Pavlopoulos","raw_affiliation_strings":["ESAT-SCD/IBBT-K.U. Leuven Future Health Department, KatholiekeUniversiteit Leuven, Leuven, Belgium","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"ESAT-SCD/IBBT-K.U. Leuven Future Health Department, KatholiekeUniversiteit Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033341548","display_name":"Ana C. Wanderley-Nogueira","orcid":null},"institutions":[{"id":"https://openalex.org/I25112270","display_name":"Universidade Federal de Pernambuco","ror":"https://ror.org/047908t24","country_code":"BR","type":"education","lineage":["https://openalex.org/I25112270"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana Carolina Wanderley-Nogueira","raw_affiliation_strings":["Departamento de Gen\u00e9tica, Laborat\u00f3rio de Gen\u00e9tica e Biotecnologia Vegetal, Centro de Ci\u00eanciasBiol\u00f3gicas, Universidade Federal de Pernambuco, Recife, PE, Brasil"],"affiliations":[{"raw_affiliation_string":"Departamento de Gen\u00e9tica, Laborat\u00f3rio de Gen\u00e9tica e Biotecnologia Vegetal, Centro de Ci\u00eanciasBiol\u00f3gicas, Universidade Federal de Pernambuco, Recife, PE, Brasil","institution_ids":["https://openalex.org/I25112270"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085114721","display_name":"Nina M. Soares-Cavalcanti","orcid":null},"institutions":[{"id":"https://openalex.org/I25112270","display_name":"Universidade Federal de Pernambuco","ror":"https://ror.org/047908t24","country_code":"BR","type":"education","lineage":["https://openalex.org/I25112270"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Nina Mota Soares-Cavalcanti","raw_affiliation_strings":["Departamento de Gen\u00e9tica, Laborat\u00f3rio de Gen\u00e9tica e Biotecnologia Vegetal, Centro de Ci\u00eanciasBiol\u00f3gicas, Universidade Federal de Pernambuco, Recife, PE, Brasil"],"affiliations":[{"raw_affiliation_string":"Departamento de Gen\u00e9tica, Laborat\u00f3rio de Gen\u00e9tica e Biotecnologia Vegetal, Centro de Ci\u00eanciasBiol\u00f3gicas, Universidade Federal de Pernambuco, Recife, PE, Brasil","institution_ids":["https://openalex.org/I25112270"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE","LU"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["Luxembourg Center for Systems Biomedicine, University of Luxembourg, Luxembourg","Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Luxembourg Center for Systems Biomedicine, University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5039053742"],"corresponding_institution_ids":["https://openalex.org/I4210153543"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.3518,"has_fulltext":true,"cited_by_count":58,"citation_normalized_percentile":{"value":0.93218551,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.7974711656570435},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7917181253433228},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.7530859708786011},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6472692489624023},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.624408483505249},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6169463992118835},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.5057008266448975},{"id":"https://openalex.org/keywords/result-set","display_name":"Result set","score":0.47799745202064514},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.47033625841140747},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3730720281600952}],"concepts":[{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.7974711656570435},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7917181253433228},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.7530859708786011},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6472692489624023},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.624408483505249},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6169463992118835},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.5057008266448975},{"id":"https://openalex.org/C4969071","wikidata":"https://www.wikidata.org/wiki/Q7316353","display_name":"Result set","level":3,"score":0.47799745202064514},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.47033625841140747},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3730720281600952},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1186/1756-0381-5-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-1","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-1","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:22297131","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22297131","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:edoc.mdc-berlin.de:12871","is_oa":false,"landing_page_url":"http://edoc.mdc-berlin.de/12871/5/12871suppl.7z","pdf_url":null,"source":{"id":"https://openalex.org/S4306400224","display_name":"MDC Repository (Max-Delbrueck-Center for Molecular Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:e56a0bd9b19b4cc2aea4b8e5574ca2cf","is_oa":true,"landing_page_url":"https://doaj.org/article/e56a0bd9b19b4cc2aea4b8e5574ca2cf","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 5, Iss 1, p 1 (2012)","raw_type":"article"},{"id":"pmh:oai:orbilu.uni.lu:10993/17049","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/17049","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, 5 (1) (2012)","raw_type":"peer reviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:3307494","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3307494","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"},{"id":"pmh:oai:unsworks.library.unsw.edu.au:1959.4/unsworks_59549","is_oa":true,"landing_page_url":"http://hdl.handle.net/1959.4/unsworks_59549","pdf_url":null,"source":{"id":"https://openalex.org/S4306401737","display_name":"UNSWorks (University of New South Wales, Sydney, Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40053085","host_organization_name":"Australian Defence Force Academy","host_organization_lineage":["https://openalex.org/I40053085"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Biodata Mining, 5, 1","raw_type":"http://purl.org/coar/resource_type/c_6501"}],"best_oa_location":{"id":"doi:10.1186/1756-0381-5-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-5-1","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-5-1","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.5299999713897705,"display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320314023","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2164381236.pdf","grobid_xml":"https://content.openalex.org/works/W2164381236.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1779982606","https://openalex.org/W1970871693","https://openalex.org/W1992381544","https://openalex.org/W1994086054","https://openalex.org/W1996002274","https://openalex.org/W2003927059","https://openalex.org/W2044290655","https://openalex.org/W2051689038","https://openalex.org/W2056989424","https://openalex.org/W2094010958","https://openalex.org/W2099781321","https://openalex.org/W2100464143","https://openalex.org/W2109943925","https://openalex.org/W2123083582","https://openalex.org/W2126259921","https://openalex.org/W2126411976","https://openalex.org/W2130930065","https://openalex.org/W2131674595","https://openalex.org/W2142785446","https://openalex.org/W2162135725","https://openalex.org/W2165462764","https://openalex.org/W2168905447"],"related_works":["https://openalex.org/W2085384747","https://openalex.org/W2106071040","https://openalex.org/W2088166309","https://openalex.org/W4312133475","https://openalex.org/W2150136235","https://openalex.org/W2041353081","https://openalex.org/W2581240705","https://openalex.org/W3160516639","https://openalex.org/W4308654829","https://openalex.org/W1990813518"],"abstract_inverted_index":{"To":[0],"our":[1],"knowledge":[2,31],"Caipirini":[3,20],"is":[4],"the":[5,22],"first":[6],"service":[7],"enabling":[8],"literature":[9],"search":[10],"directly":[11],"based":[12],"on":[13],"biological":[14],"relevance":[15],"to":[16,28],"gene":[17,33],"sets;":[18],"thus,":[19],"gives":[21],"research":[23],"community":[24],"a":[25],"new":[26],"way":[27],"unlock":[29],"hidden":[30],"from":[32],"sets":[34],"derived":[35],"via":[36],"high-throughput":[37],"experiments.":[38]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":2}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
