{"id":"https://openalex.org/W2145015685","doi":"https://doi.org/10.1186/1756-0381-2-3","title":"Partitioning clustering algorithms for protein sequence data sets","display_name":"Partitioning clustering algorithms for protein sequence data sets","publication_year":2009,"publication_date":"2009-04-02","ids":{"openalex":"https://openalex.org/W2145015685","doi":"https://doi.org/10.1186/1756-0381-2-3","mag":"2145015685","pmid":"https://pubmed.ncbi.nlm.nih.gov/19341454"},"language":"en","primary_location":{"id":"doi:10.1186/1756-0381-2-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-2-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-2-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-2-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066999592","display_name":"Sondes Fayech","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088638","display_name":"Higher Institute of Management","ror":"https://ror.org/003sxhp42","country_code":"RU","type":"education","lineage":["https://openalex.org/I4210088638"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Sondes Fayech","raw_affiliation_strings":["Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia. sondes_el_feyech@yahoo.fr","Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia. sondes_el_feyech@yahoo.fr","institution_ids":["https://openalex.org/I4210088638"]},{"raw_affiliation_string":"Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110248637","display_name":"Nadia Essoussi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nadia Essoussi","raw_affiliation_strings":["Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109873876","display_name":"Mohamed Limam","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mohamed Limam","raw_affiliation_strings":["Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, LARODEC Laboratory, Higher Institute of Management, University of Tunis, Tunis, Tunisia","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5066999592"],"corresponding_institution_ids":["https://openalex.org/I4210088638"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.9407,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.74787919,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2","issue":"1","first_page":"3","last_page":"3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.831270158290863},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7379194498062134},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5854161977767944},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.559040367603302},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.49671727418899536},{"id":"https://openalex.org/keywords/consensus-clustering","display_name":"Consensus clustering","score":0.41749829053878784},{"id":"https://openalex.org/keywords/correlation-clustering","display_name":"Correlation clustering","score":0.3670433759689331},{"id":"https://openalex.org/keywords/cure-data-clustering-algorithm","display_name":"CURE data clustering algorithm","score":0.3442823886871338},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32217079401016235},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.20855286717414856}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.831270158290863},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7379194498062134},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5854161977767944},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.559040367603302},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.49671727418899536},{"id":"https://openalex.org/C186767784","wikidata":"https://www.wikidata.org/wiki/Q5162841","display_name":"Consensus clustering","level":5,"score":0.41749829053878784},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.3670433759689331},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.3442823886871338},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32217079401016235},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.20855286717414856}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/1756-0381-2-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-2-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-2-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:19341454","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19341454","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:doaj.org/article:f85bbc1d4e834d1d9a61f2b73991834f","is_oa":true,"landing_page_url":"https://doaj.org/article/f85bbc1d4e834d1d9a61f2b73991834f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 2, Iss 1, p 3 (2009)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2678123","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2678123","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1756-0381-2-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1756-0381-2-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/1756-0381-2-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145015685.pdf","grobid_xml":"https://content.openalex.org/works/W2145015685.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1489843519","https://openalex.org/W1493454437","https://openalex.org/W1544578519","https://openalex.org/W1575476631","https://openalex.org/W1592614241","https://openalex.org/W1605275907","https://openalex.org/W1766517752","https://openalex.org/W1971784203","https://openalex.org/W1977556410","https://openalex.org/W1982589735","https://openalex.org/W1997268601","https://openalex.org/W2003087950","https://openalex.org/W2006636107","https://openalex.org/W2008907996","https://openalex.org/W2015292449","https://openalex.org/W2031810922","https://openalex.org/W2055043387","https://openalex.org/W2065042047","https://openalex.org/W2072533619","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2096039184","https://openalex.org/W2097874946","https://openalex.org/W2098913407","https://openalex.org/W2105649185","https://openalex.org/W2107302432","https://openalex.org/W2113398700","https://openalex.org/W2121297744","https://openalex.org/W2121564430","https://openalex.org/W2124166542","https://openalex.org/W2132603077","https://openalex.org/W2133828198","https://openalex.org/W2138745909","https://openalex.org/W2140000690","https://openalex.org/W2155606054","https://openalex.org/W2157975034","https://openalex.org/W2161353239","https://openalex.org/W2161732286","https://openalex.org/W2176645417","https://openalex.org/W2319660501","https://openalex.org/W2999729612","https://openalex.org/W3152026761"],"related_works":["https://openalex.org/W2384052049","https://openalex.org/W2367205823","https://openalex.org/W2406185607","https://openalex.org/W4220814143","https://openalex.org/W2087424554","https://openalex.org/W2131625050","https://openalex.org/W2111827030","https://openalex.org/W1574003721","https://openalex.org/W2311450085","https://openalex.org/W1981213098"],"abstract_inverted_index":{"We":[0],"show":[1],"that":[2],"these":[3],"methods":[4,10],"outperform":[5],"several":[6],"other":[7],"published":[8],"clustering":[9],"in":[11,20],"terms":[12,21],"of":[13,22,25],"correctly":[14],"predicting":[15],"a":[16],"classifier":[17],"and":[18],"especially":[19],"the":[23,26,37],"correctness":[24],"provided":[27],"prediction.":[28],"The":[29],"software":[30],"is":[31],"available":[32],"to":[33],"academic":[34],"users":[35],"from":[36],"authors":[38],"upon":[39],"request.":[40]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
