{"id":"https://openalex.org/W2149395944","doi":"https://doi.org/10.1186/1752-0509-8-s4-s7","title":"Microbial community pattern detection in human body habitats via ensemble clustering framework","display_name":"Microbial community pattern detection in human body habitats via ensemble clustering framework","publication_year":2014,"publication_date":"2014-12-01","ids":{"openalex":"https://openalex.org/W2149395944","doi":"https://doi.org/10.1186/1752-0509-8-s4-s7","mag":"2149395944","pmid":"https://pubmed.ncbi.nlm.nih.gov/25521415"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-8-s4-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s4-s7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S4-S7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S4-S7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Peng Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Peng Yang","raw_affiliation_strings":["Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I115228651"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiaoquan Su","orcid":null},"institutions":[{"id":"https://openalex.org/I4210158139","display_name":"Qingdao Institute of Bioenergy and Bioprocess Technology","ror":"https://ror.org/05h3vcy91","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210158139"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoquan Su","raw_affiliation_strings":["Computational Biology Group of Single Cell Center, Shandong Key Laboratory of Energy Genetics and CAS Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Science, Qingdao, 266101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Group of Single Cell Center, Shandong Key Laboratory of Energy Genetics and CAS Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Science, Qingdao, 266101, China","institution_ids":["https://openalex.org/I4210158139"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Le Ou-Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Le Ou-Yang","raw_affiliation_strings":["Center for Computer Vision and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Computer Vision and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Hon-Nian Chua","orcid":null},"institutions":[{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hon-Nian Chua","raw_affiliation_strings":["Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I115228651"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiao-Li Li","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Xiao-Li Li","raw_affiliation_strings":["Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Agency for Science, Technology & Research (A*STAR), Singapore, 138632, Singapore","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I115228651"]}]},{"author_position":"last","author":{"id":null,"display_name":"Kang Ning","orcid":null},"institutions":[{"id":"https://openalex.org/I4210158139","display_name":"Qingdao Institute of Bioenergy and Bioprocess Technology","ror":"https://ror.org/05h3vcy91","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210158139"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kang Ning","raw_affiliation_strings":["Computational Biology Group of Single Cell Center, Shandong Key Laboratory of Energy Genetics and CAS Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Science, Qingdao, 266101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Group of Single Cell Center, Shandong Key Laboratory of Energy Genetics and CAS Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Science, Qingdao, 266101, China","institution_ids":["https://openalex.org/I4210158139"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I115228651","https://openalex.org/I3005327000"],"apc_list":null,"apc_paid":null,"fwci":0.4268,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.64795796,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"8","issue":"S4","first_page":"S7","last_page":"S7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9236999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9236999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.6733999848365784,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.03779999911785126,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.8220999836921692},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.6722000241279602},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.614300012588501},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4478999972343445},{"id":"https://openalex.org/keywords/microbial-population-biology","display_name":"Microbial population biology","score":0.40540000796318054},{"id":"https://openalex.org/keywords/consensus-clustering","display_name":"Consensus clustering","score":0.4016999900341034},{"id":"https://openalex.org/keywords/human-microbiome-project","display_name":"Human Microbiome Project","score":0.3968000113964081},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.3361999988555908}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.8220999836921692},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6722000241279602},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.614300012588501},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4478999972343445},{"id":"https://openalex.org/C81407943","wikidata":"https://www.wikidata.org/wiki/Q17149178","display_name":"Microbial population biology","level":3,"score":0.40540000796318054},{"id":"https://openalex.org/C186767784","wikidata":"https://www.wikidata.org/wiki/Q5162841","display_name":"Consensus clustering","level":5,"score":0.4016999900341034},{"id":"https://openalex.org/C190944805","wikidata":"https://www.wikidata.org/wiki/Q3922751","display_name":"Human Microbiome Project","level":4,"score":0.3968000113964081},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3928999900817871},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.384799987077713},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.357699990272522},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34860000014305115},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.3361999988555908},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.33340001106262207},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.33160001039505005},{"id":"https://openalex.org/C133079900","wikidata":"https://www.wikidata.org/wiki/Q5155065","display_name":"Community structure","level":2,"score":0.3244999945163727},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.32249999046325684},{"id":"https://openalex.org/C2776088427","wikidata":"https://www.wikidata.org/wiki/Q378859","display_name":"Pattern detection","level":2,"score":0.31150001287460327},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3066999912261963},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.30059999227523804},{"id":"https://openalex.org/C4590074","wikidata":"https://www.wikidata.org/wiki/Q5608096","display_name":"Community","level":3,"score":0.2971999943256378},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.2858999967575073},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.2653000056743622},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.26339998841285706},{"id":"https://openalex.org/C2987857752","wikidata":"https://www.wikidata.org/wiki/Q12147","display_name":"Human health","level":2,"score":0.26010000705718994},{"id":"https://openalex.org/C45942800","wikidata":"https://www.wikidata.org/wiki/Q245652","display_name":"Ensemble learning","level":2,"score":0.25450000166893005}],"mesh":[{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008829","descriptor_name":"Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008829","descriptor_name":"Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008829","descriptor_name":"Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012737","descriptor_name":"Sex Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012737","descriptor_name":"Sex Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012737","descriptor_name":"Sex Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/1752-0509-8-s4-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s4-s7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S4-S7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:25521415","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25521415","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:arXiv.org:1412.7384","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1412.7384","pdf_url":"https://arxiv.org/pdf/1412.7384","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/180965","is_oa":true,"landing_page_url":"https://scholarbank.nus.edu.sg/handle/10635/180965","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Unpaywall 20201031","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4290728","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4290728","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-8-s4-s7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s4-s7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S4-S7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2807815951","display_name":null,"funder_award_id":"2009AA02Z310","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3077928441","display_name":null,"funder_award_id":"31271410","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G35433928","display_name":null,"funder_award_id":"61103167","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2149395944.pdf","grobid_xml":"https://content.openalex.org/works/W2149395944.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1806604352","https://openalex.org/W1978033244","https://openalex.org/W1981276685","https://openalex.org/W1981959283","https://openalex.org/W1985690171","https://openalex.org/W1989889539","https://openalex.org/W2009154821","https://openalex.org/W2028431644","https://openalex.org/W2029348196","https://openalex.org/W2037027640","https://openalex.org/W2047774330","https://openalex.org/W2062451863","https://openalex.org/W2065615506","https://openalex.org/W2093891969","https://openalex.org/W2095566926","https://openalex.org/W2098946845","https://openalex.org/W2104290137","https://openalex.org/W2109196993","https://openalex.org/W2109761160","https://openalex.org/W2121748291","https://openalex.org/W2126218947","https://openalex.org/W2128769815","https://openalex.org/W2131186249","https://openalex.org/W2132692097","https://openalex.org/W2135403073","https://openalex.org/W2149573313","https://openalex.org/W2150593711","https://openalex.org/W2161607603","https://openalex.org/W2165065263","https://openalex.org/W2167084464","https://openalex.org/W2169330513","https://openalex.org/W2170283814","https://openalex.org/W2170968232","https://openalex.org/W2291822716","https://openalex.org/W4244963856"],"related_works":[],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,264],"human":[2,22,34,43,51,85,221,271,301],"habitat":[3,199,210,231],"is":[4,24,36,169,273],"a":[5,25,79,116,121,142,159,212,255,259,293],"host":[6,201,233,280],"where":[7],"microbial":[8,18,110,131,143,193,217,251,262,289],"species":[9],"evolve,":[10],"function,":[11],"and":[12,27,45,81,87,171,200,232,253,279],"continue":[13],"to":[14,21,65,126,176,184,197,248],"evolve.":[15],"Elucidating":[16],"how":[17],"communities":[19],"respond":[20],"habitats":[23,94,154,278],"fundamental":[26],"critical":[28],"task,":[29],"as":[30],"establishing":[31],"baselines":[32],"of":[33,84,98,130,155,188,226,261,270,288,300],"microbiome":[35,52,60,86,222,272],"essential":[37],"in":[38,42,91],"understanding":[39],"its":[40],"role":[41],"disease":[44],"health.":[46],"Recent":[47],"studies":[48,76],"on":[49,54,134,191],"healthy":[50,156],"focus":[53],"particular":[55,92],"body":[56,93,153,198,209,230,277],"habitats,":[57],"assuming":[58],"that":[59,208,268],"develop":[61],"similar":[62,67],"structural":[63,218,227],"patterns":[64,111],"perform":[66],"ecosystem":[68],"function":[69],"under":[70],"same":[71],"environmental":[72],"conditions.":[73],"However,":[74],"current":[75],"usually":[77],"overlook":[78],"complex":[80],"interconnected":[82],"landscape":[83],"limit":[88],"the":[89,107,128,174,186],"ability":[90],"with":[95,195],"learning":[96],"models":[97],"specific":[99],"criterion.":[100],"Therefore,":[101],"these":[102],"methods":[103],"could":[104,242],"not":[105],"capture":[106],"real-world":[108],"underlying":[109],"effectively.":[112],"RESULTS:":[113],"To":[114],"obtain":[115],"comprehensive":[117,256],"view,":[118],"we":[119,139,206],"propose":[120],"novel":[122,160],"ensemble":[123,167,239],"clustering":[124,178,204,240,246,265],"framework":[125,241],"mine":[127],"structure":[129,269],"community":[132,194],"pattern":[133],"large-scale":[135],"metagenomic":[136,149],"data.":[137],"Particularly,":[138],"first":[140],"build":[141],"similarity":[144],"network":[145,175],"via":[146],"integrating":[147],"1920":[148],"samples":[150],"from":[151],"three":[152],"adults.":[157],"Then":[158],"symmetric":[161],"Nonnegative":[162],"Matrix":[163],"Factorization":[164],"(NMF)":[165],"based":[166],"model":[168,190,299],"proposed":[170],"applied":[172],"onto":[173],"detect":[177],"pattern.":[179,219],"Extensive":[180],"experiments":[181],"are":[182],"conducted":[183],"evaluate":[185],"effectiveness":[187],"our":[189,238],"deriving":[192],"respect":[196],"gender.":[202,234],"From":[203],"results,":[205],"observed":[207],"exhibits":[211],"strong":[213],"bound":[214],"but":[215],"non-unique":[216],"Meanwhile,":[220],"reveals":[223],"different":[224],"degree":[225],"variations":[228],"over":[229],"CONCLUSIONS:":[235],"In":[236],"summary,":[237],"efficiently":[243],"explore":[244],"integrated":[245,286],"results":[247,266],"accurately":[249],"identify":[250],"communities,":[252,290],"provide":[254],"view":[257],"for":[258],"set":[260],"communities.":[263],"indicate":[267],"varied":[274],"systematically":[275],"across":[276],"genders.":[281],"Such":[282],"trends":[283],"depict":[284],"an":[285],"biography":[287],"which":[291],"offer":[292],"new":[294],"insight":[295],"towards":[296],"uncovering":[297],"pathogenic":[298],"microbiome.":[302]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2016-06-24T00:00:00"}