{"id":"https://openalex.org/W2097453652","doi":"https://doi.org/10.1186/1752-0509-8-s2-i1","title":"Data integration in the era of omics: current and future challenges","display_name":"Data integration in the era of omics: current and future challenges","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2097453652","doi":"https://doi.org/10.1186/1752-0509-8-s2-i1","mag":"2097453652","pmid":"https://pubmed.ncbi.nlm.nih.gov/25032990"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-8-s2-i1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s2-i1","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S2-I1","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S2-I1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078466508","display_name":"David G\u00f3mez-Cabrero","orcid":"https://orcid.org/0000-0003-4186-3788"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"David Gomez-Cabrero","raw_affiliation_strings":["Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047548196","display_name":"Imad Abugessaisa","orcid":"https://orcid.org/0000-0001-7458-801X"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Imad Abugessaisa","raw_affiliation_strings":["Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101932607","display_name":"Dieter Maier","orcid":"https://orcid.org/0000-0003-1208-2093"},"institutions":[{"id":"https://openalex.org/I105862471","display_name":"Biomax Informatics (Germany)","ror":"https://ror.org/02h1y5y54","country_code":"DE","type":"company","lineage":["https://openalex.org/I105862471"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dieter Maier","raw_affiliation_strings":["Biomax Informatics AG, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomax Informatics AG, Munich, Germany","institution_ids":["https://openalex.org/I105862471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041076064","display_name":"Andrew E. Teschendorff","orcid":"https://orcid.org/0000-0001-7410-6527"},"institutions":[{"id":"https://openalex.org/I2801345345","display_name":"Cancer Institute (WIA)","ror":"https://ror.org/01tc10z29","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2801345345"]},{"id":"https://openalex.org/I4210147892","display_name":"CRUK Lung Cancer Centre of Excellence","ror":"https://ror.org/04nm2mq63","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210147892"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB","IN"],"is_corresponding":false,"raw_author_name":"Andrew Teschendorff","raw_affiliation_strings":["Statistical Cancer Genomics, UCL Cancer Institute; Centre for Mathematics and Physics in the Life Sciences and Experimental Biology, University College London, London, WC1E 6BT, UK","Centre for Mathematics and Physics in the Life Sciences and Experimental Biology, University College London, London, WC1E 6BT, UK","Statistical Cancer Genomics, UCL Cancer Institute"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Statistical Cancer Genomics, UCL Cancer Institute; Centre for Mathematics and Physics in the Life Sciences and Experimental Biology, University College London, London, WC1E 6BT, UK","institution_ids":["https://openalex.org/I4210147892","https://openalex.org/I45129253"]},{"raw_affiliation_string":"Centre for Mathematics and Physics in the Life Sciences and Experimental Biology, University College London, London, WC1E 6BT, UK","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"Statistical Cancer Genomics, UCL Cancer Institute","institution_ids":["https://openalex.org/I2801345345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073285869","display_name":"Matthias Merkenschlager","orcid":"https://orcid.org/0000-0003-2889-3288"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthias Merkenschlager","raw_affiliation_strings":["Lymphocyte Development Group, MRC Clinical Sciences Centre, Imperial College London, London, W12 0NN, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lymphocyte Development Group, MRC Clinical Sciences Centre, Imperial College London, London, W12 0NN, UK","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043468281","display_name":"Andreas Gisel","orcid":"https://orcid.org/0000-0001-7218-9488"},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andreas Gisel","raw_affiliation_strings":["Istituto di Tecnologie Biomediche (CNR), Unit\u00e0 Organizzativa di Bari, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto di Tecnologie Biomediche (CNR), Unit\u00e0 Organizzativa di Bari, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082124562","display_name":"Esteban Ballestar","orcid":"https://orcid.org/0000-0002-1400-2440"},"institutions":[{"id":"https://openalex.org/I4210087039","display_name":"Institut d'Investigaci\u00f3 Biom\u00e9dica de Bellvitge","ror":"https://ror.org/0008xqs48","country_code":"ES","type":"facility","lineage":["https://openalex.org/I157913058","https://openalex.org/I2802050225","https://openalex.org/I4210087039","https://openalex.org/I4210096656","https://openalex.org/I4210106543","https://openalex.org/I4210107147","https://openalex.org/I4210153292","https://openalex.org/I4387153040","https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Esteban Ballestar","raw_affiliation_strings":["Chromatin and Disease Group, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chromatin and Disease Group, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain","institution_ids":["https://openalex.org/I4210087039"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042185060","display_name":"Erik Bongcam\u2010Rudloff","orcid":"https://orcid.org/0000-0002-1947-8288"},"institutions":[{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Erik Bongcam-Rudloff","raw_affiliation_strings":["Department of Animal Breeding and Genetics, SLU Global Bioinformatics Centre, Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Breeding and Genetics, SLU Global Bioinformatics Centre, Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002377126","display_name":"Ana Conesa","orcid":"https://orcid.org/0000-0001-9597-311X"},"institutions":[{"id":"https://openalex.org/I4210165109","display_name":"Centro de Investigacion Principe Felipe","ror":"https://ror.org/05xr2yq54","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210165109"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ana Conesa","raw_affiliation_strings":["Computational Genomics Program, Centro de Investigaciones Pr\u00edncipe Felipe, Valencia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Genomics Program, Centro de Investigaciones Pr\u00edncipe Felipe, Valencia, Spain","institution_ids":["https://openalex.org/I4210165109"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035252549","display_name":"Jesper Tegn\u00e9r","orcid":"https://orcid.org/0000-0002-9568-5588"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Jesper Tegn\u00e9r","raw_affiliation_strings":["Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unit of Computational Medicine, Center for Molecular Medicine, Department of Medicine, Karolinska Institute and Karolinska University Hospita, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5078466508"],"corresponding_institution_ids":["https://openalex.org/I28166907"],"apc_list":null,"apc_paid":null,"fwci":21.2494,"has_fulltext":true,"cited_by_count":423,"citation_normalized_percentile":{"value":0.99690733,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"8","issue":"Suppl 2","first_page":"I1","last_page":"I1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.7380170226097107},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.7236572504043579},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.5578676462173462},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5271021127700806},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5145792365074158},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4884461462497711},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.4278023838996887},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.21075204014778137},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17597326636314392},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.17432063817977905},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.07603245973587036}],"concepts":[{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.7380170226097107},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.7236572504043579},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.5578676462173462},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5271021127700806},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5145792365074158},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4884461462497711},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.4278023838996887},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.21075204014778137},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17597326636314392},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.17432063817977905},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.07603245973587036},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1752-0509-8-s2-i1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s2-i1","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S2-I1","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:25032990","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25032990","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:diposit.ub.edu:2445/126351","is_oa":true,"landing_page_url":"https://hdl.handle.net/2445/126351","pdf_url":null,"source":{"id":"https://openalex.org/S4306401653","display_name":"Dip\u00f2sit Digital de la Universitat de Barcelona (Universitat de Barcelona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71999127","host_organization_name":"Universitat de Barcelona","host_organization_lineage":["https://openalex.org/I71999127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Articles publicats en revistes (Institut d'lnvestigaci\u00f3 Biom\u00e8dica de Bellvitge (IDIBELL))","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1430137","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1430137/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   BMC SYSTEMS BIOLOGY , 8  (ARTN I1)     (2014)      ","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:3072293","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4101704","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:recercat.cat:2072/336573","is_oa":true,"landing_page_url":"http://hdl.handle.net/2445/126351","pdf_url":null,"source":{"id":"https://openalex.org/S4306402147","display_name":"RECERCAT (Consorci de Serveis Universitaris de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210090028","host_organization_name":"Consorci de Serveis Universitaris de Catalunya","host_organization_lineage":["https://openalex.org/I4210090028"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:spiral.imperial.ac.uk:10044/1/71592","is_oa":true,"landing_page_url":"http://hdl.handle.net/10044/1/71592","pdf_url":null,"source":{"id":"https://openalex.org/S4306401396","display_name":"Spiral (Imperial College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I47508984","host_organization_name":"Imperial College London","host_organization_lineage":["https://openalex.org/I47508984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-8-s2-i1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-8-s2-i1","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-8-S2-I1","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.4099999964237213}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322570","display_name":"Stockholms L\u00e4ns Landsting","ror":"https://ror.org/02zrae794"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"},{"id":"https://openalex.org/F4320322582","display_name":"Sveriges Lantbruksuniversitet","ror":"https://ror.org/02yy8x990"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2097453652.pdf","grobid_xml":"https://content.openalex.org/works/W2097453652.grobid-xml"},"referenced_works_count":77,"referenced_works":["https://openalex.org/W1515884279","https://openalex.org/W1544691147","https://openalex.org/W1544923801","https://openalex.org/W1618866481","https://openalex.org/W1830682242","https://openalex.org/W1885831765","https://openalex.org/W1968886567","https://openalex.org/W1971676632","https://openalex.org/W1972863608","https://openalex.org/W1977046764","https://openalex.org/W1978034558","https://openalex.org/W1979594866","https://openalex.org/W1980857039","https://openalex.org/W1988393300","https://openalex.org/W1989277387","https://openalex.org/W2007771322","https://openalex.org/W2008051478","https://openalex.org/W2009405916","https://openalex.org/W2020541351","https://openalex.org/W2020859582","https://openalex.org/W2022287724","https://openalex.org/W2029033394","https://openalex.org/W2032627213","https://openalex.org/W2034752666","https://openalex.org/W2038606765","https://openalex.org/W2039176012","https://openalex.org/W2041440766","https://openalex.org/W2042930277","https://openalex.org/W2054251921","https://openalex.org/W2056571799","https://openalex.org/W2062993691","https://openalex.org/W2063065724","https://openalex.org/W2064015154","https://openalex.org/W2075016035","https://openalex.org/W2076616438","https://openalex.org/W2084397284","https://openalex.org/W2090092983","https://openalex.org/W2092868481","https://openalex.org/W2094675435","https://openalex.org/W2094953050","https://openalex.org/W2096465161","https://openalex.org/W2096791516","https://openalex.org/W2102158172","https://openalex.org/W2103017472","https://openalex.org/W2103666891","https://openalex.org/W2103813440","https://openalex.org/W2105679485","https://openalex.org/W2110213545","https://openalex.org/W2110503722","https://openalex.org/W2118258530","https://openalex.org/W2120188024","https://openalex.org/W2122825543","https://openalex.org/W2123032740","https://openalex.org/W2126602143","https://openalex.org/W2127230663","https://openalex.org/W2128965269","https://openalex.org/W2129256542","https://openalex.org/W2130410032","https://openalex.org/W2137200212","https://openalex.org/W2138924321","https://openalex.org/W2142237411","https://openalex.org/W2146228931","https://openalex.org/W2148857874","https://openalex.org/W2150575159","https://openalex.org/W2150904790","https://openalex.org/W2157750191","https://openalex.org/W2161224111","https://openalex.org/W2163598528","https://openalex.org/W2166445532","https://openalex.org/W2167424562","https://openalex.org/W2168909179","https://openalex.org/W2171711783","https://openalex.org/W2171777347","https://openalex.org/W2885727518","https://openalex.org/W4230875896","https://openalex.org/W4237335579","https://openalex.org/W4239662207"],"related_works":["https://openalex.org/W2924366642","https://openalex.org/W2187076076","https://openalex.org/W3173875945","https://openalex.org/W3159101980","https://openalex.org/W2966125521","https://openalex.org/W3149361930","https://openalex.org/W4224949116","https://openalex.org/W3003192283","https://openalex.org/W2996736193","https://openalex.org/W2909364225"],"abstract_inverted_index":{"To":[0],"integrate":[1],"heterogeneous":[2,47],"and":[3,31,48,70,99],"large":[4,50],"omics":[5,22,29],"data":[6,51,60,75],"constitutes":[7],"not":[8],"only":[9],"a":[10,14,84],"conceptual":[11],"challenge":[12],"but":[13],"practical":[15],"hurdle":[16],"in":[17,77],"the":[18,25,68,78,96,107],"daily":[19],"analysis":[20],"of":[21,27,106],"data.":[23],"With":[24],"rise":[26],"novel":[28,59],"technologies":[30],"through":[32],"large-scale":[33],"consortia":[34],"projects,":[35],"biological":[36],"systems":[37],"are":[38],"being":[39],"further":[40],"investigated":[41],"at":[42],"an":[43],"unprecedented":[44],"scale":[45],"generating":[46],"often":[49],"sets.":[52],"These":[53],"data-sets":[54],"encourage":[55],"researchers":[56],"to":[57,86,93],"develop":[58],"integration":[61,76],"methodologies.":[62],"In":[63],"this":[64],"introduction":[65],"we":[66],"review":[67],"definition":[69],"characterize":[71],"current":[72,88],"efforts":[73],"on":[74,91],"life":[79],"sciences.":[80],"We":[81],"have":[82],"used":[83],"web-survey":[85],"assess":[87],"research":[89,108],"projects":[90],"data-integration":[92],"tap":[94],"into":[95],"views,":[97],"needs":[98],"challenges":[100],"as":[101],"currently":[102],"perceived":[103],"by":[104],"parts":[105],"community.":[109]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":29},{"year":2024,"cited_by_count":30},{"year":2023,"cited_by_count":28},{"year":2022,"cited_by_count":34},{"year":2021,"cited_by_count":18},{"year":2020,"cited_by_count":38},{"year":2019,"cited_by_count":50},{"year":2018,"cited_by_count":43},{"year":2017,"cited_by_count":51},{"year":2016,"cited_by_count":51},{"year":2015,"cited_by_count":40},{"year":2014,"cited_by_count":7},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-28T14:05:53.105641","created_date":"2025-10-10T00:00:00"}
