{"id":"https://openalex.org/W1991281695","doi":"https://doi.org/10.1186/1752-0509-7-141","title":"Systems biology approach to stage-wise characterization of epigenetic genes in lung adenocarcinoma","display_name":"Systems biology approach to stage-wise characterization of epigenetic genes in lung adenocarcinoma","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W1991281695","doi":"https://doi.org/10.1186/1752-0509-7-141","mag":"1991281695","pmid":"https://pubmed.ncbi.nlm.nih.gov/24369052"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-7-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-7-141","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-7-141","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-7-141","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029457488","display_name":"Meeta Pradhan","orcid":"https://orcid.org/0000-0003-4450-1897"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meeta P Pradhan","raw_affiliation_strings":["School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis, IN, USA","School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061266467","display_name":"Akshay Desai","orcid":null},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Akshay Desai","raw_affiliation_strings":["School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis, IN, USA","School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044460012","display_name":"Mathew Palakal","orcid":"https://orcid.org/0000-0002-2990-0999"},"institutions":[{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mathew J Palakal","raw_affiliation_strings":["School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis IN, USA. mpalakal@iupui.edu","School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Informatics and Computing, Indiana University Purdue University Indianapolis, Indianapolis IN, USA. mpalakal@iupui.edu","institution_ids":["https://openalex.org/I55769427"]},{"raw_affiliation_string":"School of Informatics and Computing, Indiana University-Purdue University Indianapolis, Indianapolis, USA","institution_ids":["https://openalex.org/I55769427"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5044460012"],"corresponding_institution_ids":["https://openalex.org/I55769427"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":1.3757,"has_fulltext":true,"cited_by_count":50,"citation_normalized_percentile":{"value":0.79779429,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"7","issue":"1","first_page":"141","last_page":"141"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.3718999922275543,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.3718999922275543,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13426","display_name":"Kruppel-like factors research","score":0.0794999971985817,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10417","display_name":"Lung Cancer Treatments and Mutations","score":0.07840000092983246,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.8965725898742676},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8007992506027222},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.7854540348052979},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6851898431777954},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6321364641189575},{"id":"https://openalex.org/keywords/hox-gene","display_name":"Hox gene","score":0.5774025321006775},{"id":"https://openalex.org/keywords/cpg-site","display_name":"CpG site","score":0.44799676537513733},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4184768795967102},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.4121077358722687},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.24703803658485413}],"concepts":[{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.8965725898742676},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8007992506027222},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.7854540348052979},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6851898431777954},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6321364641189575},{"id":"https://openalex.org/C111039654","wikidata":"https://www.wikidata.org/wiki/Q253149","display_name":"Hox gene","level":4,"score":0.5774025321006775},{"id":"https://openalex.org/C140173407","wikidata":"https://www.wikidata.org/wiki/Q1138358","display_name":"CpG site","level":5,"score":0.44799676537513733},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4184768795967102},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.4121077358722687},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.24703803658485413}],"mesh":[{"descriptor_ui":"D000077192","descriptor_name":"Adenocarcinoma of Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077192","descriptor_name":"Adenocarcinoma of Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077192","descriptor_name":"Adenocarcinoma of Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009367","descriptor_name":"Neoplasm Staging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1752-0509-7-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-7-141","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-7-141","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:24369052","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24369052","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:europepmc.org:2872159","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3882327","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3882327","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3882327","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"},{"id":"pmh:oai:scholarworks.indianapolis.iu.edu:1805/47416","is_oa":true,"landing_page_url":"https://hdl.handle.net/1805/47416","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-7-141","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-7-141","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-7-141","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","score":0.8600000143051147,"display_name":"Life below water"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310263","display_name":"Indiana University-Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1991281695.pdf","grobid_xml":"https://content.openalex.org/works/W1991281695.grobid-xml"},"referenced_works_count":140,"referenced_works":["https://openalex.org/W1479907808","https://openalex.org/W1620262541","https://openalex.org/W1819015028","https://openalex.org/W1875112053","https://openalex.org/W1886767677","https://openalex.org/W1911921731","https://openalex.org/W1963590871","https://openalex.org/W1964504259","https://openalex.org/W1965244971","https://openalex.org/W1965262464","https://openalex.org/W1966832855","https://openalex.org/W1974342535","https://openalex.org/W1977124790","https://openalex.org/W1981046858","https://openalex.org/W1982857584","https://openalex.org/W1986849266","https://openalex.org/W1989548084","https://openalex.org/W1989578834","https://openalex.org/W1993229871","https://openalex.org/W1994473465","https://openalex.org/W1994785454","https://openalex.org/W1994902291","https://openalex.org/W1995446888","https://openalex.org/W1995945562","https://openalex.org/W1998767819","https://openalex.org/W1998831452","https://openalex.org/W1999547210","https://openalex.org/W2003521979","https://openalex.org/W2006770045","https://openalex.org/W2009405916","https://openalex.org/W2016489352","https://openalex.org/W2017373399","https://openalex.org/W2017481815","https://openalex.org/W2018847550","https://openalex.org/W2020050906","https://openalex.org/W2020414680","https://openalex.org/W2029197798","https://openalex.org/W2029655340","https://openalex.org/W2033537445","https://openalex.org/W2034669369","https://openalex.org/W2034947480","https://openalex.org/W2038612629","https://openalex.org/W2042087070","https://openalex.org/W2044527070","https://openalex.org/W2044972398","https://openalex.org/W2045515441","https://openalex.org/W2046342816","https://openalex.org/W2051827271","https://openalex.org/W2053726232","https://openalex.org/W2054823635","https://openalex.org/W2056040742","https://openalex.org/W2060827364","https://openalex.org/W2061912939","https://openalex.org/W2061978928","https://openalex.org/W2063050419","https://openalex.org/W2064164783","https://openalex.org/W2067133641","https://openalex.org/W2080226349","https://openalex.org/W2080396809","https://openalex.org/W2083045667","https://openalex.org/W2084705909","https://openalex.org/W2087887510","https://openalex.org/W2091687885","https://openalex.org/W2092525091","https://openalex.org/W2095898968","https://openalex.org/W2097924720","https://openalex.org/W2098840211","https://openalex.org/W2099396995","https://openalex.org/W2099704501","https://openalex.org/W2100761975","https://openalex.org/W2101213889","https://openalex.org/W2102433947","https://openalex.org/W2103837222","https://openalex.org/W2104739421","https://openalex.org/W2105381419","https://openalex.org/W2105597591","https://openalex.org/W2105737910","https://openalex.org/W2105992849","https://openalex.org/W2108927999","https://openalex.org/W2109986875","https://openalex.org/W2110209907","https://openalex.org/W2112090702","https://openalex.org/W2114970231","https://openalex.org/W2115992869","https://openalex.org/W2116298046","https://openalex.org/W2119626222","https://openalex.org/W2120453034","https://openalex.org/W2124954099","https://openalex.org/W2127443176","https://openalex.org/W2128605882","https://openalex.org/W2128609874","https://openalex.org/W2129604622","https://openalex.org/W2131118705","https://openalex.org/W2132518397","https://openalex.org/W2132601639","https://openalex.org/W2133700934","https://openalex.org/W2135207224","https://openalex.org/W2136492640","https://openalex.org/W2136957083","https://openalex.org/W2137076998","https://openalex.org/W2139062705","https://openalex.org/W2141101054","https://openalex.org/W2143429972","https://openalex.org/W2143498954","https://openalex.org/W2145816772","https://openalex.org/W2146362812","https://openalex.org/W2149468135","https://openalex.org/W2149780759","https://openalex.org/W2150480196","https://openalex.org/W2153779221","https://openalex.org/W2153883696","https://openalex.org/W2154056136","https://openalex.org/W2154947819","https://openalex.org/W2155470210","https://openalex.org/W2156440815","https://openalex.org/W2157419914","https://openalex.org/W2158207797","https://openalex.org/W2158491116","https://openalex.org/W2159482845","https://openalex.org/W2160019289","https://openalex.org/W2160234594","https://openalex.org/W2160351951","https://openalex.org/W2162249383","https://openalex.org/W2163485494","https://openalex.org/W2163518607","https://openalex.org/W2165567873","https://openalex.org/W2165685453","https://openalex.org/W2167292344","https://openalex.org/W2170068488","https://openalex.org/W2170125652","https://openalex.org/W2171278685","https://openalex.org/W2325343629","https://openalex.org/W2329678181","https://openalex.org/W2337081974","https://openalex.org/W2416196945","https://openalex.org/W4232037809","https://openalex.org/W4234086058","https://openalex.org/W4238452917","https://openalex.org/W4294216483","https://openalex.org/W6601375367"],"related_works":["https://openalex.org/W2214376880","https://openalex.org/W3212149434","https://openalex.org/W2073893804","https://openalex.org/W2291484187","https://openalex.org/W2169344098","https://openalex.org/W2902329290","https://openalex.org/W2045854104","https://openalex.org/W2052355316","https://openalex.org/W2046964473","https://openalex.org/W2107880877"],"abstract_inverted_index":{"BACKGROUND:":[0],"Epigenetics":[1],"refers":[2],"to":[3,15,27,158,195],"the":[4,9,18,69,73,92,107,122,220],"reversible":[5],"functional":[6],"modifications":[7],"of":[8,23,35,60,72,124,156,168,223],"genome":[10],"that":[11],"do":[12],"not":[13],"correlate":[14,159],"changes":[16],"in":[17,51,68,127,133],"DNA":[19,29,48,64,95],"sequence.":[20],"The":[21,103,118,136],"aim":[22],"this":[24],"study":[25,41],"is":[26],"understand":[28],"methylation":[30],"patterns":[31],"across":[32,79,111,142,172],"different":[33],"stages":[34],"lung":[36],"adenocarcinoma":[37],"(LUAD).":[38],"RESULTS:":[39],"Our":[40],"identified":[42,106,165],"72,":[43],"93":[44],"and":[45,55,81,116,130,145,153,181,193,218],"170":[46],"significant":[47,63,94],"methylated":[49,65,96],"genes":[50,66,110,171,189,206],"Stages":[52],"I,":[53],"II":[54],"III":[56],"respectively.":[57],"A":[58,183],"set":[59,167],"common":[61],"34":[62],"located":[67],"promoter":[70],"section":[71],"true":[74],"CpG":[75],"islands":[76],"were":[77],"found":[78],"stages,":[80],"these":[82],"were:":[83],"HOX":[84],"genes,":[85,97],"FOXG1,":[86,191],"GRIK3,":[87],"HAND2,":[88],"PRKCB,":[89],"etc.":[90],"Of":[91],"total":[93],"65":[98],"correlated":[99],"with":[100,160,207],"transcription":[101],"function.":[102],"epigenetic":[104,140,188,203],"analysis":[105,120,137,149,164,186],"following":[108],"novel":[109],"all":[112,173],"stages:":[113,174],"PTGDR,":[114],"TLX3,":[115],"POU4F2.":[117],"stage-wise":[119],"observed":[121],"appearance":[123],"NEUROG1":[125],"gene":[126],"Stage":[128,134,143,146],"I":[129,144],"its":[131],"re-appearance":[132],"III.":[135,147],"showed":[138],"similar":[139],"pattern":[141],"Pathway":[148],"revealed":[150],"important":[151],"signaling":[152],"metabolic":[154],"pathways":[155],"LUAD":[157],"epigenetics.":[161],"Epigenetic":[162],"subnetwork":[163],"a":[166],"seven":[169],"conserved":[170],"UBC,":[175],"KRAS,":[176],"PIK3CA,":[177],"PIK3R3,":[178],"RAF1,":[179],"BRAF,":[180],"RAP1A.":[182],"detailed":[184],"literature":[185],"elucidated":[187],"like":[190],"HLA-G,":[192],"NKX6-2":[194],"be":[196,211],"known":[197],"as":[198],"prognostic":[199],"targets.":[200],"CONCLUSION:":[201],"Integrating":[202],"information":[204],"for":[205,213,219],"expression":[208],"data":[209],"can":[210],"useful":[212],"comprehending":[214],"in-depth":[215],"disease":[216],"mechanism":[217],"ultimate":[221],"goal":[222],"better":[224],"target":[225],"identification.":[226]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
