{"id":"https://openalex.org/W1990653574","doi":"https://doi.org/10.1186/1752-0509-5-176","title":"Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics","display_name":"Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics","publication_year":2011,"publication_date":"2011-10-28","ids":{"openalex":"https://openalex.org/W1990653574","doi":"https://doi.org/10.1186/1752-0509-5-176","mag":"1990653574","pmid":"https://pubmed.ncbi.nlm.nih.gov/22034874"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-5-176","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-176","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-176","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-176","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018101706","display_name":"Henning Redestig","orcid":"https://orcid.org/0000-0003-2130-9288"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Henning Redestig","raw_affiliation_strings":["RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa 230-0045, Japan","RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]},{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079973992","display_name":"Miyako Kusano","orcid":"https://orcid.org/0000-0002-0052-6155"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Miyako Kusano","raw_affiliation_strings":["RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054005925","display_name":"Kaworu Ebana","orcid":null},"institutions":[{"id":"https://openalex.org/I3018761593","display_name":"Institute of Agrobiological Sciences","ror":"https://ror.org/01786mp71","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I3018761593"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kaworu Ebana","raw_affiliation_strings":["National Institute of Agrobiological Sciences 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Agrobiological Sciences 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan","institution_ids":["https://openalex.org/I3018761593"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001727973","display_name":"Makoto Kobayashi","orcid":"https://orcid.org/0000-0001-6660-450X"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Makoto Kobayashi","raw_affiliation_strings":["RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064754063","display_name":"Akira Oikawa","orcid":"https://orcid.org/0000-0001-7507-4256"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Akira Oikawa","raw_affiliation_strings":["RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101756640","display_name":"Yozo Okazaki","orcid":"https://orcid.org/0000-0002-4310-8519"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yozo Okazaki","raw_affiliation_strings":["RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059542605","display_name":"Fumio Matsuda","orcid":"https://orcid.org/0000-0003-1091-778X"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]},{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Fumio Matsuda","raw_affiliation_strings":["Kobe University Organization of Advanced Sciences and Technology 1-1 Rokkodaicho, Nada-ku, Kobe, 657-8501, Japan","RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kobe University Organization of Advanced Sciences and Technology 1-1 Rokkodaicho, Nada-ku, Kobe, 657-8501, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064001841","display_name":"Masanori Arita","orcid":"https://orcid.org/0000-0001-6706-0487"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masanori Arita","raw_affiliation_strings":["Department of Biophysics and Biochemistry, The University of Tokyo, Bunkyo-ku Hongo 7-3-1, Science Bldg 3, 113-0033, Tokyo, Japan","RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biophysics and Biochemistry, The University of Tokyo, Bunkyo-ku Hongo 7-3-1, Science Bldg 3, 113-0033, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067912734","display_name":"Naoko Fujita","orcid":"https://orcid.org/0000-0001-7432-4786"},"institutions":[{"id":"https://openalex.org/I5467274","display_name":"Akita Prefectural University","ror":"https://ror.org/05b1kx621","country_code":"JP","type":"education","lineage":["https://openalex.org/I5467274"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoko Fujita","raw_affiliation_strings":["Faculty of Bioresource Sciences, Akita Prefectural University, Akita city, Akita, 010-0195, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Bioresource Sciences, Akita Prefectural University, Akita city, Akita, 010-0195, Japan","institution_ids":["https://openalex.org/I5467274"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052696406","display_name":"Kazuki Saito","orcid":"https://orcid.org/0000-0001-6310-5342"},"institutions":[{"id":"https://openalex.org/I4210100240","display_name":"RIKEN Center for Sustainable Resource Science","ror":"https://ror.org/010rf2m76","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210100240","https://openalex.org/I4210110652"]},{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kazuki Saito","raw_affiliation_strings":["Graduate School of Pharmaceutical Sciences, Chiba University, Inohana 1-8-1, Chuo-ku, Chiba, 260-8675, Japan","RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Pharmaceutical Sciences, Chiba University, Inohana 1-8-1, Chuo-ku, Chiba, 260-8675, Japan","institution_ids":["https://openalex.org/I159385669"]},{"raw_affiliation_string":"RIKEN Plant Science Center, Tsurumi-ku, Suehiro-cho, 1-7-22 Yokohama, Kanagawa, 230-0045, Japan","institution_ids":["https://openalex.org/I4210100240"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5052696406"],"corresponding_institution_ids":["https://openalex.org/I159385669","https://openalex.org/I4210100240"],"apc_list":null,"apc_paid":null,"fwci":2.1283,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.8689492,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"176","last_page":"176"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.7458999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.7458999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13142","display_name":"GABA and Rice Research","score":0.059700001031160355,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.031300000846385956,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.8046269416809082},{"id":"https://openalex.org/keywords/metabolome","display_name":"Metabolome","score":0.7219969034194946},{"id":"https://openalex.org/keywords/trait","display_name":"Trait","score":0.6407225728034973},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6375622749328613},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.5046674013137817},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.48944297432899475},{"id":"https://openalex.org/keywords/multivariate-statistics","display_name":"Multivariate statistics","score":0.4573807418346405},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4549848139286041},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.4446653127670288},{"id":"https://openalex.org/keywords/quantitative-trait-locus","display_name":"Quantitative trait locus","score":0.41647469997406006},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2948671579360962},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16684770584106445},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16384339332580566},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.16221678256988525}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.8046269416809082},{"id":"https://openalex.org/C135870905","wikidata":"https://www.wikidata.org/wiki/Q903667","display_name":"Metabolome","level":3,"score":0.7219969034194946},{"id":"https://openalex.org/C106934330","wikidata":"https://www.wikidata.org/wiki/Q1971873","display_name":"Trait","level":2,"score":0.6407225728034973},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6375622749328613},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.5046674013137817},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.48944297432899475},{"id":"https://openalex.org/C161584116","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate statistics","level":2,"score":0.4573807418346405},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4549848139286041},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.4446653127670288},{"id":"https://openalex.org/C81941488","wikidata":"https://www.wikidata.org/wiki/Q853421","display_name":"Quantitative trait locus","level":3,"score":0.41647469997406006},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2948671579360962},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16684770584106445},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16384339332580566},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.16221678256988525},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001947","descriptor_name":"Breeding","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001947","descriptor_name":"Breeding","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001947","descriptor_name":"Breeding","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1752-0509-5-176","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-176","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-176","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:22034874","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22034874","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:9c1d9106c802422b9f8bc02ebd5fbdf7","is_oa":false,"landing_page_url":"https://doaj.org/article/9c1d9106c802422b9f8bc02ebd5fbdf7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 5, Iss 1, p 176 (2011)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3305925","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3305925","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-5-176","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-176","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-176","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.4099999964237213}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322971","display_name":"Ume\u00e5 Universitet","ror":"https://ror.org/05kb8h459"},{"id":"https://openalex.org/F4320335125","display_name":"RIKEN","ror":"https://ror.org/01sjwvz98"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W1990653574.pdf"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1568200847","https://openalex.org/W1971588783","https://openalex.org/W1975830887","https://openalex.org/W1978649068","https://openalex.org/W1981779399","https://openalex.org/W1982832978","https://openalex.org/W1985132575","https://openalex.org/W1998033595","https://openalex.org/W2002964417","https://openalex.org/W2003571878","https://openalex.org/W2006216406","https://openalex.org/W2015811795","https://openalex.org/W2024082048","https://openalex.org/W2024286414","https://openalex.org/W2024969662","https://openalex.org/W2028968550","https://openalex.org/W2036712724","https://openalex.org/W2039863626","https://openalex.org/W2049499418","https://openalex.org/W2055494779","https://openalex.org/W2065541696","https://openalex.org/W2067328329","https://openalex.org/W2086348674","https://openalex.org/W2098077362","https://openalex.org/W2098126593","https://openalex.org/W2100588380","https://openalex.org/W2101098894","https://openalex.org/W2108488321","https://openalex.org/W2112058589","https://openalex.org/W2112348586","https://openalex.org/W2113525623","https://openalex.org/W2117737004","https://openalex.org/W2130021930","https://openalex.org/W2130333576","https://openalex.org/W2134070988","https://openalex.org/W2135714004","https://openalex.org/W2136149318","https://openalex.org/W2139543692","https://openalex.org/W2158287613","https://openalex.org/W2159240099","https://openalex.org/W2165636898","https://openalex.org/W2167942713","https://openalex.org/W2168377231","https://openalex.org/W2168804352"],"related_works":["https://openalex.org/W1996644818","https://openalex.org/W1965468642","https://openalex.org/W2093500216","https://openalex.org/W2053588008","https://openalex.org/W2916376502","https://openalex.org/W2260452057","https://openalex.org/W3101161779","https://openalex.org/W423371831","https://openalex.org/W2777729175","https://openalex.org/W4295779760"],"abstract_inverted_index":{"BACKGROUND:":[0],"Increasing":[1],"awareness":[2],"of":[3,29,57,70,84,89,124,138,145,165,184],"limitations":[4],"to":[5,15,187],"natural":[6],"resources":[7],"has":[8],"set":[9,94],"high":[10],"expectations":[11],"for":[12,36,65,74,167,179],"plant":[13,190],"science":[14],"deliver":[16],"efficient":[17],"crops":[18],"with":[19,108,170],"increased":[20],"yields,":[21],"improved":[22],"stress":[23],"tolerance,":[24],"and":[25,73,114,182],"tailored":[26,185],"composition.":[27],"Collections":[28],"representative":[30],"varieties":[31,153],"are":[32],"a":[33,62],"valuable":[34],"resource":[35],"compiling":[37],"broad":[38],"breeding":[39],"germplasms":[40,186],"that":[41,51,102,122],"can":[42],"satisfy":[43],"these":[44],"diverse":[45],"needs.":[46],"RESULTS:":[47],"Here":[48],"we":[49],"show":[50],"the":[52,67,81,90,103,110,125,134,139,143,163],"untargeted":[53],"high-coverage":[54],"metabolomic":[55],"characterization":[56],"such":[58],"core":[59],"collections":[60],"is":[61],"powerful":[63],"approach":[64],"studying":[66],"molecular":[68,172],"backgrounds":[69],"quality":[71,128],"traits":[72,129,169],"constructing":[75],"predictive":[76],"metabolome-trait":[77],"models.":[78],"We":[79,100],"profiled":[80],"metabolic":[82,135],"composition":[83,136],"kernels":[85],"from":[86,133],"field-grown":[87],"plants":[88],"rice":[91],"diversity":[92],"research":[93],"using":[95,151],"4":[96],"complementary":[97],"analytical":[98],"platforms.":[99],"found":[101],"metabolite":[104],"profiles":[105],"were":[106],"correlated":[107],"both":[109],"overall":[111],"population":[112,140],"structure":[113],"fine-grained":[115],"genetic":[116],"diversity.":[117],"Multivariate":[118],"regression":[119],"analysis":[120],"showed":[121],"10":[123],"17":[126],"studied":[127],"could":[130,148],"be":[131,149],"predicted":[132],"independently":[137],"structure.":[141],"Furthermore,":[142],"model":[144],"amylose":[146],"ratio":[147],"validated":[150],"external":[152],"grown":[154],"in":[155],"an":[156],"independent":[157],"experiment.":[158],"CONCLUSIONS:":[159],"Our":[160],"results":[161],"demonstrate":[162],"utility":[164],"metabolomics":[166],"linking":[168],"quantitative":[171],"data.":[173],"This":[174],"opens":[175],"up":[176],"new":[177],"opportunities":[178],"trait":[180],"prediction":[181],"construction":[183],"support":[188],"modern":[189],"breeding.":[191]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":3}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
