{"id":"https://openalex.org/W2166128237","doi":"https://doi.org/10.1186/1752-0509-5-160","title":"Regulation of the yeast metabolic cycle by transcription factors with periodic activities","display_name":"Regulation of the yeast metabolic cycle by transcription factors with periodic activities","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W2166128237","doi":"https://doi.org/10.1186/1752-0509-5-160","mag":"2166128237","pmid":"https://pubmed.ncbi.nlm.nih.gov/21992532"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-5-160","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-160","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-160","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-160","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078937959","display_name":"Aliz R. Rao","orcid":"https://orcid.org/0000-0003-3843-4210"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Aliz R Rao","raw_affiliation_strings":["Bioinformatics Interdepartmental Program, University of California, Los Angeles, USA. alizrrao@gmail.com","Bioinformatics Interdepartmental Program, University of California, Los Angeles, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Interdepartmental Program, University of California, Los Angeles, USA. alizrrao@gmail.com","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Bioinformatics Interdepartmental Program, University of California, Los Angeles, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011670317","display_name":"Matteo Pellegrini","orcid":"https://orcid.org/0000-0001-9355-9564"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Matteo Pellegrini","raw_affiliation_strings":["Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, USA","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5011670317","https://openalex.org/A5078937959"],"corresponding_institution_ids":["https://openalex.org/I161318765"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":0.0,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.11985315,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"5","issue":"1","first_page":"160","last_page":"160"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.006800000090152025,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.0035000001080334187,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.7128113508224487},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.5435535311698914},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5232143402099609},{"id":"https://openalex.org/keywords/yeast","display_name":"Yeast","score":0.5159803032875061},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5097019672393799},{"id":"https://openalex.org/keywords/metabolic-regulation","display_name":"Metabolic regulation","score":0.44813215732574463},{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.4294585883617401},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.33284851908683777},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33034712076187134},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2005382478237152},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08469468355178833},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.08103683590888977}],"concepts":[{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.7128113508224487},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5435535311698914},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5232143402099609},{"id":"https://openalex.org/C2779222958","wikidata":"https://www.wikidata.org/wiki/Q45422","display_name":"Yeast","level":2,"score":0.5159803032875061},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5097019672393799},{"id":"https://openalex.org/C2991986269","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolic regulation","level":3,"score":0.44813215732574463},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.4294585883617401},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.33284851908683777},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33034712076187134},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2005382478237152},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08469468355178833},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.08103683590888977},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1752-0509-5-160","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-160","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-160","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:21992532","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21992532","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:europepmc.org:2219043","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3216092","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:928be1ca5d2542259d60012991f53960","is_oa":false,"landing_page_url":"https://doaj.org/article/928be1ca5d2542259d60012991f53960","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 5, Iss 1, p 160 (2011)","raw_type":"article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt3t51j8br","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/3t51j8br","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, vol 5, iss 1","raw_type":"article"},{"id":"pmh:qt3t51j8br","is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/3t51j8br","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Rao, Aliz R; & Pellegrini, Matteo. (2011). Regulation of the yeast metabolic cycle by transcription factors with periodic activities. BMC Systems Biology, 5(1), 160. doi: http://dx.doi.org/10.1186/1752-0509-5-160. Retrieved from: http://www.escholarship.org/uc/item/3t51j8br","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-5-160","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-5-160","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-5-160","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2166128237.pdf","grobid_xml":"https://content.openalex.org/works/W2166128237.grobid-xml"},"referenced_works_count":71,"referenced_works":["https://openalex.org/W294442527","https://openalex.org/W614669698","https://openalex.org/W1539988911","https://openalex.org/W1547033864","https://openalex.org/W1763621819","https://openalex.org/W1963142741","https://openalex.org/W1967066043","https://openalex.org/W1967344134","https://openalex.org/W1970249028","https://openalex.org/W1976245786","https://openalex.org/W1981282198","https://openalex.org/W1981334243","https://openalex.org/W1981884391","https://openalex.org/W1983653026","https://openalex.org/W1993418715","https://openalex.org/W2003798106","https://openalex.org/W2003889665","https://openalex.org/W2005166958","https://openalex.org/W2006093883","https://openalex.org/W2006103778","https://openalex.org/W2020992585","https://openalex.org/W2021722841","https://openalex.org/W2022398870","https://openalex.org/W2025868820","https://openalex.org/W2028801502","https://openalex.org/W2030712030","https://openalex.org/W2036799174","https://openalex.org/W2039931639","https://openalex.org/W2046250502","https://openalex.org/W2054233487","https://openalex.org/W2055457189","https://openalex.org/W2065458745","https://openalex.org/W2066599845","https://openalex.org/W2070955414","https://openalex.org/W2072279552","https://openalex.org/W2073217358","https://openalex.org/W2073506826","https://openalex.org/W2075091287","https://openalex.org/W2075471766","https://openalex.org/W2077351082","https://openalex.org/W2080498142","https://openalex.org/W2085519916","https://openalex.org/W2099788003","https://openalex.org/W2100771810","https://openalex.org/W2102780666","https://openalex.org/W2103453943","https://openalex.org/W2107298574","https://openalex.org/W2115662646","https://openalex.org/W2119445257","https://openalex.org/W2121401282","https://openalex.org/W2122075848","https://openalex.org/W2122683221","https://openalex.org/W2123456290","https://openalex.org/W2123782813","https://openalex.org/W2124961252","https://openalex.org/W2125862386","https://openalex.org/W2126362614","https://openalex.org/W2127754721","https://openalex.org/W2132518731","https://openalex.org/W2133127556","https://openalex.org/W2134224359","https://openalex.org/W2137446827","https://openalex.org/W2137683543","https://openalex.org/W2141573544","https://openalex.org/W2143610637","https://openalex.org/W2144400827","https://openalex.org/W2150904401","https://openalex.org/W2154637533","https://openalex.org/W2158047771","https://openalex.org/W2165011536","https://openalex.org/W2168838076"],"related_works":["https://openalex.org/W261727187","https://openalex.org/W4240624121","https://openalex.org/W2124768480","https://openalex.org/W1985900993","https://openalex.org/W2385199909","https://openalex.org/W2068444965","https://openalex.org/W2315013871","https://openalex.org/W1940278121","https://openalex.org/W2349275003","https://openalex.org/W2141754664"],"abstract_inverted_index":{"BACKGROUND:":[0],"When":[1],"growing":[2],"budding":[3],"yeast":[4,12,45,123,162],"under":[5],"continuous,":[6],"nutrient-limited":[7],"conditions,":[8],"over":[9],"half":[10],"of":[11,28,54,117,121,138,160],"genes":[13],"exhibit":[14],"periodic":[15],"expression":[16],"patterns.":[17,60],"Periodicity":[18],"can":[19],"also":[20],"be":[21,128],"observed":[22],"in":[23,25,34,43],"respiration,":[24,106],"the":[26,39,44,52,91,94,122,139,152,161],"timing":[27],"cell":[29,107],"division,":[30],"as":[31,33],"well":[32],"various":[35,153],"metabolite":[36],"levels.":[37],"Knowing":[38],"transcription":[40,75,97,101,143],"factors":[41,102],"involved":[42],"metabolic":[46,124,163],"cycle":[47,108,125],"is":[48],"helpful":[49],"for":[50],"determining":[51],"cascade":[53],"regulatory":[55],"events":[56],"that":[57,151],"cause":[58],"these":[59],"RESULTS:":[61],"Transcription":[62],"factor":[63,76,144],"activities":[64,145],"were":[65,81,87],"estimated":[66,82],"by":[67],"linear":[68],"regression":[69],"using":[70,83],"time":[71],"series":[72],"and":[73,86,113,134],"genome-wide":[74],"binding":[77],"data.":[78],"Time-translation":[79],"matrices":[80],"least":[84],"squares":[85],"used":[88],"to":[89,127],"model":[90],"interactions":[92],"between":[93,119],"most":[95],"significant":[96],"factors.":[98],"The":[99],"top":[100],"have":[103],"functions":[104,155],"involving":[105],"events,":[109],"amino":[110],"acid":[111],"metabolism":[112],"glycolysis.":[114],"Key":[115],"regulators":[116],"transitions":[118],"phases":[120,140,159],"appear":[126],"Hap1,":[129],"Hap4,":[130],"Gcn4,":[131],"Msn4,":[132],"Swi6":[133],"Adr1.":[135],"CONCLUSIONS:":[136],"Analysis":[137],"at":[141],"which":[142],"peak":[146],"supports":[147],"previous":[148],"findings":[149],"suggesting":[150],"cellular":[154],"occur":[156],"during":[157],"specific":[158],"cycle.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}