{"id":"https://openalex.org/W2041502250","doi":"https://doi.org/10.1186/1752-0509-3-82","title":"Visualizing post genomics data-sets on customized pathway maps by ProMeTra \u2013 aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example","display_name":"Visualizing post genomics data-sets on customized pathway maps by ProMeTra \u2013 aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example","publication_year":2009,"publication_date":"2009-08-23","ids":{"openalex":"https://openalex.org/W2041502250","doi":"https://doi.org/10.1186/1752-0509-3-82","mag":"2041502250","pmid":"https://pubmed.ncbi.nlm.nih.gov/19698148"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-3-82","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-82","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-3-82","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-3-82","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055733947","display_name":"Heiko Neuweger","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Heiko Neuweger","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany. heiko.neuweger@cebitec.uni-bielefeld.de","Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany. heiko.neuweger@cebitec.uni-bielefeld.de","institution_ids":["https://openalex.org/I20121455"]},{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051805616","display_name":"Marcus Persicke","orcid":"https://orcid.org/0000-0001-5333-1530"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Marcus Persicke","raw_affiliation_strings":["Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046753272","display_name":"Stefan P. Albaum","orcid":"https://orcid.org/0000-0002-1827-9914"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan P Albaum","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019304835","display_name":"Thomas Bekel","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Bekel","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033922943","display_name":"Michael Dondrup","orcid":"https://orcid.org/0000-0002-2371-5928"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Dondrup","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043412740","display_name":"Andrea T. H\u00fcser","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andrea T H\u00fcser","raw_affiliation_strings":["Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028911129","display_name":"J\u00f6rn Winnebald","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"J\u00f6rn Winnebald","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111898128","display_name":"Jessica Schneider","orcid":null},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jessica Schneider","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018584026","display_name":"J\u00f6rn Kalinowski","orcid":"https://orcid.org/0000-0002-9052-1998"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"J\u00f6rn Kalinowski","raw_affiliation_strings":["Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Genome Research and Systems Biology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088085534","display_name":"Alexander Goesmann","orcid":"https://orcid.org/0000-0002-7086-2568"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Goesmann","raw_affiliation_strings":["Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Genomics, Center for Biotechnology, Bielefeld University, Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5051805616","https://openalex.org/A5055733947"],"corresponding_institution_ids":["https://openalex.org/I20121455"],"apc_list":null,"apc_paid":null,"fwci":2.9655,"has_fulltext":true,"cited_by_count":74,"citation_normalized_percentile":{"value":0.91296704,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"3","issue":"1","first_page":"82","last_page":"82"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/corynebacterium-glutamicum","display_name":"Corynebacterium glutamicum","score":0.8588165044784546},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5865700244903564},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5807679891586304},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.560355544090271},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5333594679832458},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5306925773620605},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.522307813167572},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.501251220703125},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"Functional genomics","score":0.496145099401474},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.4743679463863373},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4437708556652069},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4115932881832123},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3963369131088257},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.29847222566604614},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.25455909967422485},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.23626834154129028},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16594746708869934},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14350667595863342}],"concepts":[{"id":"https://openalex.org/C2776260651","wikidata":"https://www.wikidata.org/wiki/Q292314","display_name":"Corynebacterium glutamicum","level":3,"score":0.8588165044784546},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5865700244903564},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5807679891586304},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.560355544090271},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5333594679832458},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5306925773620605},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.522307813167572},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.501251220703125},{"id":"https://openalex.org/C161078062","wikidata":"https://www.wikidata.org/wiki/Q1068690","display_name":"Functional genomics","level":5,"score":0.496145099401474},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.4743679463863373},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4437708556652069},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4115932881832123},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3963369131088257},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29847222566604614},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25455909967422485},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.23626834154129028},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16594746708869934},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14350667595863342},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D048230","descriptor_name":"Corynebacterium glutamicum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048230","descriptor_name":"Corynebacterium glutamicum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048230","descriptor_name":"Corynebacterium glutamicum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1752-0509-3-82","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-82","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-3-82","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:19698148","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19698148","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:bb5ae1f7bf784250a2721ae814994c01","is_oa":true,"landing_page_url":"https://doaj.org/article/bb5ae1f7bf784250a2721ae814994c01","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 3, Iss 1, p 82 (2009)","raw_type":"article"},{"id":"pmh:oai:pub.librecat.org:1783813","is_oa":true,"landing_page_url":"https://pub.uni-bielefeld.de/record/1783813","pdf_url":null,"source":{"id":"https://openalex.org/S4306401671","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Neuweger H, Persicke M, Albaum S, et al. Visualizing post genomics data-sets on customized pathway maps by ProMeTra \u2013 aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example. <em>BMC Systems Biology</em>. 2009;3(1): 82.","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2744654","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2744654","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-3-82","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-82","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-3-82","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5217280597","display_name":null,"funder_award_id":"0313704","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G576936334","display_name":null,"funder_award_id":"0313805","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G7411285542","display_name":null,"funder_award_id":"0313805A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2041502250.pdf","grobid_xml":"https://content.openalex.org/works/W2041502250.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W1509926796","https://openalex.org/W1559438670","https://openalex.org/W1588464350","https://openalex.org/W1649645444","https://openalex.org/W1946371345","https://openalex.org/W1976626942","https://openalex.org/W1976861576","https://openalex.org/W1985855050","https://openalex.org/W1986662234","https://openalex.org/W1986809046","https://openalex.org/W1988525433","https://openalex.org/W1995462206","https://openalex.org/W1998038109","https://openalex.org/W2000652017","https://openalex.org/W2005286603","https://openalex.org/W2019240775","https://openalex.org/W2024724657","https://openalex.org/W2030956764","https://openalex.org/W2036162880","https://openalex.org/W2040161464","https://openalex.org/W2045478141","https://openalex.org/W2051123219","https://openalex.org/W2057073472","https://openalex.org/W2057899240","https://openalex.org/W2059737879","https://openalex.org/W2063490591","https://openalex.org/W2070878607","https://openalex.org/W2072378785","https://openalex.org/W2074280444","https://openalex.org/W2074906123","https://openalex.org/W2089041533","https://openalex.org/W2098432885","https://openalex.org/W2112311826","https://openalex.org/W2112942905","https://openalex.org/W2115955917","https://openalex.org/W2117364474","https://openalex.org/W2118872240","https://openalex.org/W2123697930","https://openalex.org/W2128601422","https://openalex.org/W2130861270","https://openalex.org/W2132253462","https://openalex.org/W2133781129","https://openalex.org/W2140260334","https://openalex.org/W2142913541","https://openalex.org/W2147831097","https://openalex.org/W2150908245","https://openalex.org/W2154467599","https://openalex.org/W2155201905","https://openalex.org/W2158217645","https://openalex.org/W2159482845","https://openalex.org/W2159675211","https://openalex.org/W2163369626","https://openalex.org/W2164190876","https://openalex.org/W2166430819","https://openalex.org/W2168245920","https://openalex.org/W2168778058","https://openalex.org/W2171514816","https://openalex.org/W2622427009","https://openalex.org/W4230392683","https://openalex.org/W4239708670","https://openalex.org/W4240231372","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3041688340","https://openalex.org/W643408457","https://openalex.org/W2118872240","https://openalex.org/W2154631167","https://openalex.org/W2166430819","https://openalex.org/W2009365322","https://openalex.org/W1826362639","https://openalex.org/W2092868481","https://openalex.org/W4229599664","https://openalex.org/W2030404924"],"abstract_inverted_index":{"The":[0],"interpretation":[1],"and":[2,19],"visualization":[3],"of":[4,7,31,45],"the":[5,14,32],"results":[6],"this":[8],"complex":[9],"experiment":[10],"was":[11],"facilitated":[12],"by":[13],"ProMeTra":[15],"software.":[16],"Both":[17],"transcriptome":[18],"metabolome":[20],"data":[21,34],"were":[22],"visualized":[23],"on":[24],"a":[25],"metabolic":[26],"pathway":[27],"map.":[28],"Visual":[29],"inspection":[30],"combined":[33],"confirmed":[35],"existing":[36],"knowledge":[37],"but":[38],"also":[39],"delivered":[40],"novel":[41],"correlations":[42],"that":[43],"are":[44],"potential":[46],"biotechnological":[47],"importance.":[48]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":7},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":12},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}