{"id":"https://openalex.org/W2136610034","doi":"https://doi.org/10.1186/1752-0509-3-48","title":"Information flow during gene activation by signaling molecules: ethylene transduction in Arabidopsis cells as a study system","display_name":"Information flow during gene activation by signaling molecules: ethylene transduction in Arabidopsis cells as a study system","publication_year":2009,"publication_date":"2009-05-05","ids":{"openalex":"https://openalex.org/W2136610034","doi":"https://doi.org/10.1186/1752-0509-3-48","mag":"2136610034","pmid":"https://pubmed.ncbi.nlm.nih.gov/19416539"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-3-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-3-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-3-48","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032018922","display_name":"Jos\u00e9 D\u0131\u0301az","orcid":"https://orcid.org/0000-0002-3129-0114"},"institutions":[{"id":"https://openalex.org/I884181516","display_name":"Universidad Aut\u00f3noma del Estado de Morelos","ror":"https://ror.org/03rzb4f20","country_code":"MX","type":"education","lineage":["https://openalex.org/I884181516"]},{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Jos\u00e9 D\u00edaz","raw_affiliation_strings":["Facultad de Ciencias Universidad Aut\u00f3noma del Estado de Morelos Cuernavaca, Morelos 62209, M\u00e9xico. biofisica@yahoo.com","Centro de Ciencias de la Complejidad Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, M\u00e9xico","Facultad de Ciencias Universidad Aut\u00f3noma del Estado de Morelos Cuernavaca, Morelos, M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Facultad de Ciencias Universidad Aut\u00f3noma del Estado de Morelos Cuernavaca, Morelos 62209, M\u00e9xico. biofisica@yahoo.com","institution_ids":["https://openalex.org/I884181516"]},{"raw_affiliation_string":"Centro de Ciencias de la Complejidad Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Facultad de Ciencias Universidad Aut\u00f3noma del Estado de Morelos Cuernavaca, Morelos, M\u00e9xico","institution_ids":["https://openalex.org/I884181516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022055568","display_name":"Elena \u00c1lvarez\u2010Buylla","orcid":"https://orcid.org/0000-0002-7938-6473"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]},{"id":"https://openalex.org/I167724894","display_name":"Universidad Aut\u00f3noma de la Ciudad de M\u00e9xico","ror":"https://ror.org/04q0r6m34","country_code":"MX","type":"education","lineage":["https://openalex.org/I167724894"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Elena R Alvarez-Buylla","raw_affiliation_strings":["Centro de Ciencias de la Complejidad Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, DF, 04510, M\u00e9xico","Departamento de Ecolog\u00eda Funcional, Instituto de Ecolog\u00eda Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, DF, 04510, M\u00e9xico","Departamento de Ecolog\u00eda Funcional Instituto de Ecolog\u00eda Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, \u00a0, M\u00e9xico, M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Ciencias de la Complejidad Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, DF, 04510, M\u00e9xico","institution_ids":["https://openalex.org/I167724894","https://openalex.org/I8961855"]},{"raw_affiliation_string":"Departamento de Ecolog\u00eda Funcional, Instituto de Ecolog\u00eda Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, M\u00e9xico, DF, 04510, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Departamento de Ecolog\u00eda Funcional Instituto de Ecolog\u00eda Universidad Nacional Aut\u00f3noma de M\u00e9xico Cd Universitaria, \u00a0, M\u00e9xico, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5032018922"],"corresponding_institution_ids":["https://openalex.org/I884181516","https://openalex.org/I8961855"],"apc_list":null,"apc_paid":null,"fwci":2.9505,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.91213382,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"3","issue":"1","first_page":"48","last_page":"48"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10473","display_name":"Postharvest Quality and Shelf Life Management","score":0.1371999979019165,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10473","display_name":"Postharvest Quality and Shelf Life Management","score":0.1371999979019165,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12211","display_name":"Aluminum toxicity and tolerance in plants and animals","score":0.09669999778270721,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12813","display_name":"Plant and Biological Electrophysiology Studies","score":0.07339999824762344,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.6847572326660156},{"id":"https://openalex.org/keywords/transduction","display_name":"Transduction (biophysics)","score":0.6174991130828857},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.6037221550941467},{"id":"https://openalex.org/keywords/signal-transduction","display_name":"Signal transduction","score":0.55660080909729},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.49694111943244934},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4751298725605011},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.46811622381210327},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44768643379211426},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25049176812171936},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.17928481101989746}],"concepts":[{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.6847572326660156},{"id":"https://openalex.org/C15152581","wikidata":"https://www.wikidata.org/wiki/Q7833966","display_name":"Transduction (biophysics)","level":2,"score":0.6174991130828857},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.6037221550941467},{"id":"https://openalex.org/C62478195","wikidata":"https://www.wikidata.org/wiki/Q828130","display_name":"Signal transduction","level":2,"score":0.55660080909729},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.49694111943244934},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4751298725605011},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.46811622381210327},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44768643379211426},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25049176812171936},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.17928481101989746},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004305","descriptor_name":"Dose-Response Relationship, Drug","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004305","descriptor_name":"Dose-Response Relationship, Drug","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004305","descriptor_name":"Dose-Response Relationship, Drug","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004305","descriptor_name":"Dose-Response Relationship, Drug","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005030","descriptor_name":"Ethylenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005030","descriptor_name":"Ethylenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005030","descriptor_name":"Ethylenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005030","descriptor_name":"Ethylenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009687","descriptor_name":"Nuclear Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009687","descriptor_name":"Nuclear Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009687","descriptor_name":"Nuclear Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009687","descriptor_name":"Nuclear Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015533","descriptor_name":"Transcriptional Activation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015533","descriptor_name":"Transcriptional Activation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015533","descriptor_name":"Transcriptional Activation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015533","descriptor_name":"Transcriptional Activation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1752-0509-3-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-3-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:19416539","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19416539","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:77322b56a7cf409db84e0d06c7d55345","is_oa":false,"landing_page_url":"https://doaj.org/article/77322b56a7cf409db84e0d06c7d55345","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 3, Iss 1, p 48 (2009)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:1856183","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2688479","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-3-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-3-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-3-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323401","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2136610034.pdf","grobid_xml":"https://content.openalex.org/works/W2136610034.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W616447529","https://openalex.org/W1517272733","https://openalex.org/W1607198972","https://openalex.org/W1965014257","https://openalex.org/W1965251889","https://openalex.org/W1970070519","https://openalex.org/W1983341673","https://openalex.org/W1989262356","https://openalex.org/W1989729143","https://openalex.org/W2009700862","https://openalex.org/W2019131362","https://openalex.org/W2023928327","https://openalex.org/W2027176563","https://openalex.org/W2032314245","https://openalex.org/W2041085998","https://openalex.org/W2049752727","https://openalex.org/W2108527506","https://openalex.org/W2119309676","https://openalex.org/W2132517266","https://openalex.org/W2161512142","https://openalex.org/W2163175103","https://openalex.org/W2169397162","https://openalex.org/W2169803818","https://openalex.org/W3140968660","https://openalex.org/W4300439579"],"related_works":["https://openalex.org/W3147805512","https://openalex.org/W1976583488","https://openalex.org/W46439636","https://openalex.org/W3149522072","https://openalex.org/W2776744275","https://openalex.org/W2804364832","https://openalex.org/W4388695760","https://openalex.org/W4389574364","https://openalex.org/W5284979","https://openalex.org/W4245853730"],"abstract_inverted_index":{"BACKGROUND:":[0],"We":[1,93],"study":[2],"root":[3,156],"cells":[4],"from":[5,26,142],"the":[6,12,17,31,36,40,52,61,66,69,73,79,86,89,96,102,105,119,132,143,149,155,162,165,189,192,203,206,222,225,228,231,238,246,254,258,275,278,292,300,304,307,315,320,323,327,331,337,340],"model":[7],"plant":[8],"Arabidopsis":[9],"thaliana":[10],"and":[11,83,177,256,286,345],"communication":[13],"channel":[14],"conformed":[15],"by":[16,72,88,154,299],"ethylene":[18,74,90,170],"signal":[19],"transduction":[20],"pathway.":[21,92],"A":[22,310],"basic":[23],"equation":[24,47],"taken":[25],"our":[27],"previous":[28],"work":[29],"relates":[30],"probability":[32],"of":[33,35,42,58,68,98,104,139,151,164,184,200,224,230,240,248,260,262,277,280,306,322,330,339],"expression":[34,103,305,321],"gene":[37,107,284,290,325],"ERF1":[38,108,233,251,265],"to":[39,50,122,129,336],"concentration":[41],"ethylene.":[43],"RESULTS:":[44],"The":[45,169],"above":[46],"is":[48,296,334],"used":[49],"compute":[51],"Shannon":[53,294,316],"entropy":[54,295,317],"(H)":[55],"or":[56],"degree":[57],"uncertainty":[59,301],"that":[60,95,148,273,314,333],"genetic":[62],"machinery":[63],"has":[64],"during":[65,227,245],"decoding":[67],"message":[70,194,208],"encoded":[71],"specific":[75],"receptors":[76],"embedded":[77],"in":[78,187,274],"endoplasmic":[80],"reticulum":[81],"membrane":[82],"transmitted":[84],"into":[85,253],"nucleus":[87,190,204,255],"signaling":[91,171],"show":[94],"amount":[97,150],"information":[99,140,152,241,328],"associated":[100,302,318],"with":[101,126,161,303,319],"master":[106,283,308],"(Ethylene":[109],"Response":[110],"Factor":[111],"1)":[112],"can":[113,134,158],"be":[114,159],"computed.":[115],"Then":[116],"we":[117,219,271],"examine":[118],"system":[120,226,279,332],"response":[121,186,217],"sinusoidal":[123,197],"input":[124,166,207],"signals":[125],"varying":[127],"frequencies":[128],"determine":[130],"if":[131],"cell":[133,157],"distinguish":[135],"between":[136],"different":[137],"regimes":[138],"flow":[141],"environment.":[144],"Our":[145],"results":[146],"demonstrate":[147,272],"managed":[153],"correlated":[160],"frequency":[163,185,216],"signal.":[167],"CONCLUSION:":[168],"pathway":[172],"cuts":[173],"off":[174],"very":[175,178],"low":[176],"high":[179],"frequencies,":[180],"allowing":[181],"a":[182,196,281,287],"window":[183,202],"which":[188],"reads":[191,205],"incoming":[193],"as":[195,209],"input.":[198],"Out":[199],"this":[201,215],"an":[210],"approximately":[211],"non-varying":[212],"one.":[213],"From":[214],"analysis":[218],"estimate:":[220],"a)":[221],"gain":[223],"synthesis":[229,261],"protein":[232],"(approximately":[234,267],"-5.6":[235],"dB);":[236],"b)":[237],"rate":[239],"transfer":[242],"(0.003":[243],"bits)":[244],"transport":[247],"each":[249,263],"new":[250,264],"molecule":[252,266],"c)":[257],"time":[259],"21.3":[268],"s).":[269],"Finally,":[270],"case":[276],"single":[282,288],"(ERF1)":[285],"slave":[289],"(HLS1),":[291],"total":[293],"completely":[297],"determined":[298],"gene.":[309],"second":[311],"proposition":[312],"shows":[313],"HLS1":[324],"determines":[326],"content":[329],"related":[335],"interaction":[338],"antagonistic":[341],"genes":[342],"ARF1,":[343],"2":[344],"HLS1.":[346]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
