{"id":"https://openalex.org/W2155102754","doi":"https://doi.org/10.1186/1752-0509-2-85","title":"Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data","display_name":"Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data","publication_year":2008,"publication_date":"2008-10-07","ids":{"openalex":"https://openalex.org/W2155102754","doi":"https://doi.org/10.1186/1752-0509-2-85","mag":"2155102754","pmid":"https://pubmed.ncbi.nlm.nih.gov/18840283"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-2-85","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-85","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-85","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-85","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000428870","display_name":"Maxime Durot","orcid":"https://orcid.org/0000-0001-7189-5217"},"institutions":[{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Maxime Durot","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, CP5706, 91057 Evry, Cedex, France. mdurot@genoscope.cns.fr","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, CP5706, 91057 Evry, Cedex, France. mdurot@genoscope.cns.fr","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019944621","display_name":"Fran\u00e7ois Le F\u00e8vre","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Le F\u00e8vre","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019266441","display_name":"V\u00e9ronique de Berardinis","orcid":"https://orcid.org/0000-0002-3273-4135"},"institutions":[{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"V\u00e9ronique de Berardinis","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080280630","display_name":"Annett Kreimeyer","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Annett Kreimeyer","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072154324","display_name":"David Vallenet","orcid":"https://orcid.org/0000-0001-6648-0332"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David Vallenet","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039286975","display_name":"Cyril Combe","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cyril Combe","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067330761","display_name":"Serge Smidtas","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Serge Smidtas","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000482521","display_name":"Marcel Salanoubat","orcid":"https://orcid.org/0000-0003-1132-6455"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marcel Salanoubat","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111888753","display_name":"Jean Weissenbach","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean Weissenbach","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032439096","display_name":"Vincent Sch\u00e4chter","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vincent Schachter","raw_affiliation_strings":["Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)"],"affiliations":[{"raw_affiliation_string":"Genoscope (Commissariat \u00e0 l'Energie Atomique) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d'Evry, 2 rue Gaston Cr\u00e9mieux, 91057 Evry, Cedex, CP5706, France","institution_ids":["https://openalex.org/I4210115028","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique m\u00e9tabolique (GENOSCOPE, 2 rue Gaston Cr\u00e9mieux 91057 Evry Cedex - France)","institution_ids":["https://openalex.org/I4210096708"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5000428870"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210096708","https://openalex.org/I4210115028"],"apc_list":null,"apc_paid":null,"fwci":3.1633,"has_fulltext":true,"cited_by_count":88,"citation_normalized_percentile":{"value":0.9221922,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2","issue":"1","first_page":"85","last_page":"85"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5954066514968872},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5909560322761536},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5790047645568848},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.5726957321166992},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.49656492471694946},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4955939054489136},{"id":"https://openalex.org/keywords/flux-balance-analysis","display_name":"Flux balance analysis","score":0.48890557885169983},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.4790114760398865},{"id":"https://openalex.org/keywords/metabolic-engineering","display_name":"Metabolic engineering","score":0.4729180932044983},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.47170424461364746},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.44216129183769226},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3560890555381775},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2891286015510559}],"concepts":[{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5954066514968872},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5909560322761536},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5790047645568848},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.5726957321166992},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.49656492471694946},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4955939054489136},{"id":"https://openalex.org/C167091322","wikidata":"https://www.wikidata.org/wiki/Q5463029","display_name":"Flux balance analysis","level":2,"score":0.48890557885169983},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.4790114760398865},{"id":"https://openalex.org/C6350086","wikidata":"https://www.wikidata.org/wiki/Q6822347","display_name":"Metabolic engineering","level":3,"score":0.4729180932044983},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.47170424461364746},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.44216129183769226},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3560890555381775},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2891286015510559}],"mesh":[{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000150","descriptor_name":"Acinetobacter","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1752-0509-2-85","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-85","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-85","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:18840283","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18840283","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:HAL:hal-02503057v1","is_oa":false,"landing_page_url":"https://hal.science/hal-02503057","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, 2008, 2 (1), pp.85. &#x27E8;10.1186/1752-0509-2-85&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:787de28ef674491bbdabdc128faf0e03","is_oa":true,"landing_page_url":"https://doaj.org/article/787de28ef674491bbdabdc128faf0e03","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 2, Iss 1, p 85 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2606687","is_oa":true,"landing_page_url":"http://doi.org/10.1186/1752-0509-2-85","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-2-85","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-85","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-85","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.6499999761581421}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2155102754.pdf","grobid_xml":"https://content.openalex.org/works/W2155102754.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W45604747","https://openalex.org/W285913222","https://openalex.org/W1500299357","https://openalex.org/W1512810258","https://openalex.org/W1549597524","https://openalex.org/W1558275258","https://openalex.org/W1586762598","https://openalex.org/W1603770972","https://openalex.org/W1611041432","https://openalex.org/W1765523660","https://openalex.org/W1829356669","https://openalex.org/W1854991512","https://openalex.org/W1982440567","https://openalex.org/W1983881573","https://openalex.org/W1983888098","https://openalex.org/W1984345785","https://openalex.org/W1984852783","https://openalex.org/W1996529795","https://openalex.org/W2000010070","https://openalex.org/W2009940763","https://openalex.org/W2017886256","https://openalex.org/W2018591360","https://openalex.org/W2031400745","https://openalex.org/W2043440339","https://openalex.org/W2048214825","https://openalex.org/W2079531107","https://openalex.org/W2087928503","https://openalex.org/W2088226054","https://openalex.org/W2090622331","https://openalex.org/W2091317547","https://openalex.org/W2094397891","https://openalex.org/W2096245011","https://openalex.org/W2103892786","https://openalex.org/W2107406071","https://openalex.org/W2107459209","https://openalex.org/W2108078368","https://openalex.org/W2108775616","https://openalex.org/W2108859156","https://openalex.org/W2109005330","https://openalex.org/W2110256580","https://openalex.org/W2111468050","https://openalex.org/W2111906329","https://openalex.org/W2111967267","https://openalex.org/W2120713539","https://openalex.org/W2127257007","https://openalex.org/W2128746754","https://openalex.org/W2130364940","https://openalex.org/W2131845465","https://openalex.org/W2133298156","https://openalex.org/W2133425351","https://openalex.org/W2134786161","https://openalex.org/W2135585793","https://openalex.org/W2137654430","https://openalex.org/W2152193238","https://openalex.org/W2153059528","https://openalex.org/W2158541664","https://openalex.org/W2158615882","https://openalex.org/W2159482845","https://openalex.org/W2162237022","https://openalex.org/W2163855763","https://openalex.org/W2164997719","https://openalex.org/W2170427655","https://openalex.org/W2171793445","https://openalex.org/W2536620281","https://openalex.org/W4248664566"],"related_works":["https://openalex.org/W1992844569","https://openalex.org/W2046546139","https://openalex.org/W1567976153","https://openalex.org/W4310964874","https://openalex.org/W600432994","https://openalex.org/W1918238777","https://openalex.org/W2613838074","https://openalex.org/W2338895903","https://openalex.org/W2126646394","https://openalex.org/W3155625606"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":4}],"updated_date":"2026-03-09T08:58:05.943551","created_date":"2025-10-10T00:00:00"}
