{"id":"https://openalex.org/W2131058598","doi":"https://doi.org/10.1186/1752-0509-2-48","title":"Elucidating the mechanisms of cooperative calcium-calmodulin interactions: a structural systems biology approach","display_name":"Elucidating the mechanisms of cooperative calcium-calmodulin interactions: a structural systems biology approach","publication_year":2008,"publication_date":"2008-06-02","ids":{"openalex":"https://openalex.org/W2131058598","doi":"https://doi.org/10.1186/1752-0509-2-48","mag":"2131058598","pmid":"https://pubmed.ncbi.nlm.nih.gov/18518982"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-2-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-48","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049630802","display_name":"Najl V. Valeyev","orcid":null},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Najl V Valeyev","raw_affiliation_strings":["Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK. najl.valeyev@googlemail.com","Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK. najl.valeyev@googlemail.com","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077819322","display_name":"Declan G. Bates","orcid":"https://orcid.org/0000-0003-1395-9846"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Declan G Bates","raw_affiliation_strings":["Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055960042","display_name":"J. S. Heslop\u2010Harrison","orcid":"https://orcid.org/0000-0002-3105-2167"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pat Heslop-Harrison","raw_affiliation_strings":["Department of Biology, Systems Biology Lab, University of Leicester, University Road, Leicester, LE1 7RH, UK","Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Systems Biology Lab, University of Leicester, University Road, Leicester, LE1 7RH, UK","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007050558","display_name":"Ian Postlethwaite","orcid":"https://orcid.org/0000-0002-0267-1831"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ian Postlethwaite","raw_affiliation_strings":["Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, LE1 7RH, UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089952394","display_name":"Nikolay V. Kotov","orcid":"https://orcid.org/0000-0003-2084-2988"},"institutions":[{"id":"https://openalex.org/I21203515","display_name":"Kazan Federal University","ror":"https://ror.org/05256ym39","country_code":"RU","type":"education","lineage":["https://openalex.org/I21203515"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nikolay V Kotov","raw_affiliation_strings":["Department of Physics, Biophysics & Bionics Lab, Kazan State University, Kazan, 420008, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physics, Biophysics & Bionics Lab, Kazan State University, Kazan, 420008, Russia","institution_ids":["https://openalex.org/I21203515"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5049630802"],"corresponding_institution_ids":["https://openalex.org/I153648349"],"apc_list":null,"apc_paid":null,"fwci":1.8228,"has_fulltext":true,"cited_by_count":51,"citation_normalized_percentile":{"value":0.84880394,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2","issue":"1","first_page":"48","last_page":"48"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.23960000276565552,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.23960000276565552,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10169","display_name":"Protein Kinase Regulation and GTPase Signaling","score":0.21690000593662262,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.05719999969005585,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/calmodulin","display_name":"Calmodulin","score":0.969923734664917},{"id":"https://openalex.org/keywords/cooperativity","display_name":"Cooperativity","score":0.7017340660095215},{"id":"https://openalex.org/keywords/calcium","display_name":"Calcium","score":0.6687805652618408},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.5313228964805603},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5113338828086853},{"id":"https://openalex.org/keywords/calcium-binding-protein","display_name":"Calcium-binding protein","score":0.48719948530197144},{"id":"https://openalex.org/keywords/calcium-signaling","display_name":"Calcium signaling","score":0.4571601450443268},{"id":"https://openalex.org/keywords/structural-biology","display_name":"Structural biology","score":0.4405367374420166},{"id":"https://openalex.org/keywords/cooperative-binding","display_name":"Cooperative binding","score":0.43945205211639404},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42939502000808716},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.428966760635376},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.369670569896698},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.36678266525268555},{"id":"https://openalex.org/keywords/intracellular","display_name":"Intracellular","score":0.3311951756477356},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3140330910682678},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.30020439624786377}],"concepts":[{"id":"https://openalex.org/C29688787","wikidata":"https://www.wikidata.org/wiki/Q409145","display_name":"Calmodulin","level":3,"score":0.969923734664917},{"id":"https://openalex.org/C166014724","wikidata":"https://www.wikidata.org/wiki/Q337217","display_name":"Cooperativity","level":2,"score":0.7017340660095215},{"id":"https://openalex.org/C519063684","wikidata":"https://www.wikidata.org/wiki/Q706","display_name":"Calcium","level":2,"score":0.6687805652618408},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.5313228964805603},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5113338828086853},{"id":"https://openalex.org/C122229402","wikidata":"https://www.wikidata.org/wiki/Q5018802","display_name":"Calcium-binding protein","level":3,"score":0.48719948530197144},{"id":"https://openalex.org/C201571599","wikidata":"https://www.wikidata.org/wiki/Q5018840","display_name":"Calcium signaling","level":3,"score":0.4571601450443268},{"id":"https://openalex.org/C191120209","wikidata":"https://www.wikidata.org/wiki/Q908902","display_name":"Structural biology","level":2,"score":0.4405367374420166},{"id":"https://openalex.org/C187250156","wikidata":"https://www.wikidata.org/wiki/Q2902610","display_name":"Cooperative binding","level":3,"score":0.43945205211639404},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42939502000808716},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.428966760635376},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.369670569896698},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.36678266525268555},{"id":"https://openalex.org/C79879829","wikidata":"https://www.wikidata.org/wiki/Q5571762","display_name":"Intracellular","level":2,"score":0.3311951756477356},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3140330910682678},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.30020439624786377},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1752-0509-2-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:18518982","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18518982","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:nrl.northumbria.ac.uk:9934","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401884","display_name":"Northumbria Research Link (Northumbria University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32394136","host_organization_name":"Northumbria University","host_organization_lineage":["https://openalex.org/I32394136"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:b0c3ce6193a34e21b7ef3068fa148928","is_oa":false,"landing_page_url":"https://doaj.org/article/b0c3ce6193a34e21b7ef3068fa148928","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 2, Iss 1, p 48 (2008)","raw_type":"article"},{"id":"pmh:oai:lra.le.ac.uk:2381/14142","is_oa":true,"landing_page_url":"http://www.biomedcentral.com/1752-0509/2/48","pdf_url":null,"source":{"id":"https://openalex.org/S4306402365","display_name":"Leicester Research Archive (University of Leicester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I153648349","host_organization_name":"University of Leicester","host_organization_lineage":["https://openalex.org/I153648349"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2435525","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2435525","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-2-48","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-2-48","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-2-48","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7928442535","display_name":null,"funder_award_id":"BB/D015340/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2131058598.pdf","grobid_xml":"https://content.openalex.org/works/W2131058598.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W28054452","https://openalex.org/W1486466859","https://openalex.org/W1565248232","https://openalex.org/W1576403707","https://openalex.org/W1587036618","https://openalex.org/W1641120577","https://openalex.org/W1784820495","https://openalex.org/W1823382097","https://openalex.org/W1918683107","https://openalex.org/W1965608446","https://openalex.org/W1965661118","https://openalex.org/W1968211102","https://openalex.org/W1969971056","https://openalex.org/W1978249496","https://openalex.org/W1980369656","https://openalex.org/W1980430647","https://openalex.org/W1982252438","https://openalex.org/W1987159249","https://openalex.org/W1992596115","https://openalex.org/W1996713526","https://openalex.org/W1997297151","https://openalex.org/W1998093640","https://openalex.org/W2001535102","https://openalex.org/W2007395401","https://openalex.org/W2016385245","https://openalex.org/W2020564163","https://openalex.org/W2029870632","https://openalex.org/W2032217193","https://openalex.org/W2038071582","https://openalex.org/W2042016836","https://openalex.org/W2050566213","https://openalex.org/W2059765293","https://openalex.org/W2061095840","https://openalex.org/W2062071583","https://openalex.org/W2084344997","https://openalex.org/W2085275630","https://openalex.org/W2086141071","https://openalex.org/W2096942328","https://openalex.org/W2099666638","https://openalex.org/W2103581039","https://openalex.org/W2107208446","https://openalex.org/W2111054934","https://openalex.org/W2120029297","https://openalex.org/W2131654094","https://openalex.org/W2143261080","https://openalex.org/W2149893493","https://openalex.org/W2157200764","https://openalex.org/W2161263250","https://openalex.org/W2168398034","https://openalex.org/W2242726375","https://openalex.org/W2411533611","https://openalex.org/W2413602991","https://openalex.org/W2429942626","https://openalex.org/W4254386665"],"related_works":["https://openalex.org/W1997135566","https://openalex.org/W2067253151","https://openalex.org/W1004292963","https://openalex.org/W1533754708","https://openalex.org/W1986169335","https://openalex.org/W2078068721","https://openalex.org/W1978883012","https://openalex.org/W4205106225","https://openalex.org/W2092615839","https://openalex.org/W1965064962"],"abstract_inverted_index":{"BACKGROUND:":[0],"Calmodulin":[1],"is":[2,146],"an":[3],"important":[4],"multifunctional":[5],"molecule":[6],"that":[7,27,137],"regulates":[8],"the":[9,18,76,87,97,113,123,138,152,157,169],"activities":[10],"of":[11,15,70,78,96,99,102,109,118,142,171],"a":[12,56,63,93],"large":[13],"number":[14,170],"proteins":[16],"in":[17,25,89,156,168],"cell.":[19],"Calcium":[20],"binding":[21,41],"induces":[22],"conformational":[23],"transitions":[24],"calmodulin":[26,43,120,129],"make":[28],"it":[29],"specifically":[30],"active":[31],"to":[32,42,66,91,148,151,175],"particular":[33],"target":[34,130,144,179],"proteins.":[35],"The":[36,107],"precise":[37],"mechanisms":[38,101],"underlying":[39],"calcium":[40],"are":[44],"still,":[45],"however,":[46],"quite":[47],"poorly":[48],"understood.":[49],"RESULTS:":[50],"In":[51],"this":[52],"study,":[53],"we":[54],"adopt":[55],"structural":[57,124],"systems":[58],"biology":[59],"approach":[60],"and":[61,126,140,161,166],"develop":[62],"mathematical":[64],"model":[65,135],"investigate":[67],"various":[68],"types":[69],"cooperative":[71],"calcium-calmodulin":[72,105],"interactions.":[73,106],"We":[74],"compare":[75],"predictions":[77],"our":[79,110],"analysis":[80,111],"with":[81],"physiological":[82,127],"dose-response":[83],"curves":[84],"taken":[85],"from":[86],"literature,":[88],"order":[90],"provide":[92],"quantitative":[94],"comparison":[95],"effects":[98],"different":[100],"cooperativity":[103],"on":[104],"results":[108],"reduce":[112],"gap":[114],"between":[115],"current":[116],"understanding":[117],"intracellular":[119],"function":[121],"at":[122],"level":[125],"calcium-dependent":[128],"activation":[131],"experiments.":[132],"CONCLUSION:":[133],"Our":[134],"predicts":[136],"specificity":[139],"selectivity":[141],"CaM":[143,177],"regulation":[145],"likely":[147],"be":[149],"due":[150],"following":[153],"factors:":[154],"variations":[155,167],"target-specific":[158],"Ca2+":[159,172],"dissociation":[160,164],"cooperatively":[162],"effected":[163],"constants,":[165],"ions":[173],"required":[174],"bind":[176],"for":[178],"activation.":[180]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
