{"id":"https://openalex.org/W1985282379","doi":"https://doi.org/10.1186/1752-0509-1-38","title":"New insights about host response to smallpox using microarray data","display_name":"New insights about host response to smallpox using microarray data","publication_year":2007,"publication_date":"2007-08-24","ids":{"openalex":"https://openalex.org/W1985282379","doi":"https://doi.org/10.1186/1752-0509-1-38","mag":"1985282379","pmid":"https://pubmed.ncbi.nlm.nih.gov/17718913"},"language":"en","primary_location":{"id":"doi:10.1186/1752-0509-1-38","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-1-38","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-1-38","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-1-38","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5106670727","display_name":"Gustavo Henrique Esteves","orcid":"https://orcid.org/0000-0003-1000-2387"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210131883","display_name":"Brazilian Society of Computational and Applied Mathematics","ror":"https://ror.org/03kcw4w74","country_code":"BR","type":"other","lineage":["https://openalex.org/I4210131883"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Gustavo H Esteves","raw_affiliation_strings":["BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil. gesteves@vision.ime.usp.br","BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil. gesteves@vision.ime.usp.br","institution_ids":["https://openalex.org/I4210131883"]},{"raw_affiliation_string":"BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109095151","display_name":"Ana CQ Simoes","orcid":null},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana CQ Simoes","raw_affiliation_strings":["BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","Laborat\u00f3rio de Bioinform\u00e1tica, Departamento de Bioqu\u00edmica, Instituto de Qu\u00edmica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]},{"raw_affiliation_string":"Laborat\u00f3rio de Bioinform\u00e1tica, Departamento de Bioqu\u00edmica, Instituto de Qu\u00edmica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103408505","display_name":"Estevao Souza","orcid":null},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Estevao Souza","raw_affiliation_strings":["Departamento de Estat\u00edstica, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Estat\u00edstica, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061683900","display_name":"Rodrigo A Dias","orcid":null},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Rodrigo A Dias","raw_affiliation_strings":["BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIOINFO, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078073624","display_name":"Raydonal Ospina","orcid":"https://orcid.org/0000-0002-9884-9090"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Raydonal Ospina","raw_affiliation_strings":["Departamento de Estat\u00edstica, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Estat\u00edstica, Instituto de Matem\u00e1tica e Estat\u00edstica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048122156","display_name":"Thiago M. Ven\u00e2ncio","orcid":"https://orcid.org/0000-0002-2215-8082"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Thiago M Venancio","raw_affiliation_strings":["Laborat\u00f3rio de Bioinform\u00e1tica, Departamento de Bioqu\u00edmica, Instituto de Qu\u00edmica, Universidade de S\u00e3o Paulo, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Bioinform\u00e1tica, Departamento de Bioqu\u00edmica, Instituto de Qu\u00edmica, Universidade de S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5106670727"],"corresponding_institution_ids":["https://openalex.org/I17974374","https://openalex.org/I4210131883"],"apc_list":null,"apc_paid":null,"fwci":0.2292,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.46668225,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"1","issue":"1","first_page":"38","last_page":"38"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.6158000230789185,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11767","display_name":"Poxvirus research and outbreaks","score":0.6158000230789185,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13410","display_name":"Immune responses and vaccinations","score":0.08630000054836273,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10699","display_name":"Primate Behavior and Ecology","score":0.017500000074505806,"subfield":{"id":"https://openalex.org/subfields/3207","display_name":"Social Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/smallpox","display_name":"Smallpox","score":0.7524300813674927},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.66171795129776},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.546909511089325},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5466769337654114},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.5406553149223328},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5387561917304993},{"id":"https://openalex.org/keywords/macaque","display_name":"Macaque","score":0.530643880367279},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.5275808572769165},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.5096588134765625},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.47309282422065735},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.44815006852149963},{"id":"https://openalex.org/keywords/smallpox-vaccine","display_name":"Smallpox vaccine","score":0.4481111466884613},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.3321612477302551},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.28611159324645996},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.24008610844612122},{"id":"https://openalex.org/keywords/vaccination","display_name":"Vaccination","score":0.21089401841163635},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17976456880569458},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.11605662107467651},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.0722874104976654},{"id":"https://openalex.org/keywords/vaccinia","display_name":"Vaccinia","score":0.06382375955581665}],"concepts":[{"id":"https://openalex.org/C2778417375","wikidata":"https://www.wikidata.org/wiki/Q12214","display_name":"Smallpox","level":3,"score":0.7524300813674927},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.66171795129776},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.546909511089325},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5466769337654114},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.5406553149223328},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5387561917304993},{"id":"https://openalex.org/C2778950215","wikidata":"https://www.wikidata.org/wiki/Q177601","display_name":"Macaque","level":2,"score":0.530643880367279},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.5275808572769165},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.5096588134765625},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.47309282422065735},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.44815006852149963},{"id":"https://openalex.org/C2779272165","wikidata":"https://www.wikidata.org/wiki/Q1037810","display_name":"Smallpox vaccine","level":5,"score":0.4481111466884613},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3321612477302551},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.28611159324645996},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.24008610844612122},{"id":"https://openalex.org/C22070199","wikidata":"https://www.wikidata.org/wiki/Q192995","display_name":"Vaccination","level":2,"score":0.21089401841163635},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17976456880569458},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.11605662107467651},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0722874104976654},{"id":"https://openalex.org/C2781356689","wikidata":"https://www.wikidata.org/wiki/Q1986297","display_name":"Vaccinia","level":4,"score":0.06382375955581665},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C40767141","wikidata":"https://www.wikidata.org/wiki/Q285697","display_name":"Recombinant DNA","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D008251","descriptor_name":"Macaca","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D012899","descriptor_name":"Smallpox","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015815","descriptor_name":"Cell Adhesion Molecules","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015815","descriptor_name":"Cell Adhesion Molecules","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015815","descriptor_name":"Cell Adhesion Molecules","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015996","descriptor_name":"Survival Rate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1752-0509-1-38","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-1-38","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-1-38","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:17718913","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17718913","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:www.producao.usp.br:BDPI/33129","is_oa":true,"landing_page_url":"http://www.producao.usp.br/handle/BDPI/33129","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da USP","raw_type":"publishedVersion"},{"id":"pmh:oai:europepmc.org:1171235","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2077868","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1752-0509-1-38","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-1-38","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-1-38","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320323339","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1985282379.pdf","grobid_xml":"https://content.openalex.org/works/W1985282379.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W274441265","https://openalex.org/W1513309874","https://openalex.org/W1559601682","https://openalex.org/W1663779312","https://openalex.org/W1970753581","https://openalex.org/W1992452843","https://openalex.org/W2024081693","https://openalex.org/W2024722673","https://openalex.org/W2066304844","https://openalex.org/W2085175448","https://openalex.org/W2087197302","https://openalex.org/W2093937338","https://openalex.org/W2094671932","https://openalex.org/W2108964915","https://openalex.org/W2115668602","https://openalex.org/W2118488619","https://openalex.org/W2127053639","https://openalex.org/W2137035181","https://openalex.org/W2140000393","https://openalex.org/W2147246240","https://openalex.org/W2167017098","https://openalex.org/W2171088586","https://openalex.org/W4299293027"],"related_works":["https://openalex.org/W2136757835","https://openalex.org/W1990294133","https://openalex.org/W2131273618","https://openalex.org/W1984648625","https://openalex.org/W2334434277","https://openalex.org/W2046130821","https://openalex.org/W2613902064","https://openalex.org/W4385608326","https://openalex.org/W2088571828","https://openalex.org/W2223230183"],"abstract_inverted_index":{"BACKGROUND:":[0],"Smallpox":[1],"is":[2,55],"a":[3,32],"lethal":[4],"disease":[5],"that":[6,120],"was":[7],"endemic":[8],"in":[9,109],"many":[10],"parts":[11],"of":[12,45,63,75,103,159],"the":[13,58,61,93,104,110,130],"world":[14],"until":[15],"eradicated":[16],"by":[17],"massive":[18],"immunization.":[19],"Due":[20],"to":[21,41,56,72,83,96,132,165,169],"its":[22,29],"lethality,":[23],"there":[24],"are":[25],"serious":[26],"concerns":[27],"about":[28,60,92],"use":[30],"as":[31,100],"bioweapon.":[33],"Here":[34],"we":[35],"analyze":[36],"publicly":[37],"available":[38],"microarray":[39],"data":[40],"further":[42],"understand":[43],"survival":[44,85,114,138],"smallpox":[46],"infected":[47],"macaques,":[48],"using":[49,147],"systems":[50],"biology":[51],"approaches.":[52,150],"Our":[53,151],"goal":[54],"improve":[57],"knowledge":[59],"progression":[62],"this":[64,97],"disease.":[65],"RESULTS:":[66],"We":[67],"used":[68],"KEGG":[69],"pathways":[70,144],"annotations":[71],"define":[73],"groups":[74,123],"genes":[76],"(or":[77],"modules),":[78],"and":[79,106],"subsequently":[80],"compared":[81],"them":[82],"macaque":[84],"times.":[86,115],"This":[87],"technique":[88],"provided":[89],"additional":[90],"insights":[91],"host":[94,131],"response":[95,128],"disease,":[98],"such":[99],"increased":[101],"expression":[102],"cytokines":[105],"ECM":[107],"receptors":[108],"individuals":[111],"with":[112,136],"higher":[113,137],"These":[116],"results":[117],"could":[118,124],"indicate":[119],"these":[121],"gene":[122],"influence":[125],"an":[126],"effective":[127],"from":[129],"smallpox.":[133],"CONCLUSION:":[134],"Macaques":[135],"times":[139],"clearly":[140],"express":[141],"some":[142],"specific":[143],"previously":[145],"unidentified":[146],"regular":[148],"gene-by-gene":[149],"work":[152],"also":[153],"shows":[154],"how":[155],"third":[156],"party":[157],"analysis":[158],"public":[160],"datasets":[161],"can":[162],"be":[163],"important":[164],"support":[166],"new":[167],"hypotheses":[168],"relevant":[170],"biological":[171],"problems.":[172]},"counts_by_year":[{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
