{"id":"https://openalex.org/W2150062453","doi":"https://doi.org/10.1186/1751-0473-9-5","title":"PFClust: an optimised implementation of a parameter-free clustering algorithm","display_name":"PFClust: an optimised implementation of a parameter-free clustering algorithm","publication_year":2014,"publication_date":"2014-02-04","ids":{"openalex":"https://openalex.org/W2150062453","doi":"https://doi.org/10.1186/1751-0473-9-5","mag":"2150062453","pmid":"https://pubmed.ncbi.nlm.nih.gov/24490618"},"language":"en","primary_location":{"id":"doi:10.1186/1751-0473-9-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-9-5","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-9-5","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-9-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046391019","display_name":"Khadija Musayeva","orcid":null},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Khadija Musayeva","raw_affiliation_strings":["School of Computer Science, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9SX, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9SX, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076014189","display_name":"Tristan Henderson","orcid":"https://orcid.org/0000-0002-5028-9047"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tristan Henderson","raw_affiliation_strings":["School of Computer Science, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9SX, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9SX, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046050351","display_name":"John B. O. Mitchell","orcid":"https://orcid.org/0000-0002-0379-6097"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"John BO Mitchell","raw_affiliation_strings":["EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9ST, UK"],"affiliations":[{"raw_affiliation_string":"EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9ST, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065502322","display_name":"Lazaros Mavridis","orcid":"https://orcid.org/0000-0001-5001-9445"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lazaros Mavridis","raw_affiliation_strings":["EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland KY16 9ST, UK. lazaros.mavridis.lm@gmail.com","EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9ST, UK"],"affiliations":[{"raw_affiliation_string":"EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland KY16 9ST, UK. lazaros.mavridis.lm@gmail.com","institution_ids":[]},{"raw_affiliation_string":"EaStCHEM School of Chemistry and Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Scotland, KY16 9ST, UK","institution_ids":["https://openalex.org/I16835326"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5046391019"],"corresponding_institution_ids":["https://openalex.org/I16835326"],"apc_list":null,"apc_paid":null,"fwci":2.546,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.91447982,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"9","issue":"1","first_page":"5","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10637","display_name":"Advanced Clustering Algorithms Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10637","display_name":"Advanced Clustering Algorithms Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7018617391586304},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6596152186393738},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5125905871391296},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4177696704864502},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38619112968444824},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2968835234642029}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7018617391586304},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6596152186393738},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5125905871391296},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4177696704864502},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38619112968444824},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2968835234642029}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/1751-0473-9-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-9-5","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-9-5","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},{"id":"pmid:24490618","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24490618","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source code for biology and medicine","raw_type":null},{"id":"pmh:oai:europepmc.org:2925319","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3940029","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:research-repository.st-andrews.ac.uk:10023/4491","is_oa":true,"landing_page_url":"https://hdl.handle.net/10023/4491","pdf_url":null,"source":{"id":"https://openalex.org/S4306400230","display_name":"St Andrews Research Repository (St Andrews Research Repository)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16835326","host_organization_name":"University of St Andrews","host_organization_lineage":["https://openalex.org/I16835326"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal article"}],"best_oa_location":{"id":"doi:10.1186/1751-0473-9-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-9-5","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-9-5","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321049","display_name":"World Anti-Doping Agency","ror":"https://ror.org/00v3jqn19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2150062453.pdf","grobid_xml":"https://content.openalex.org/works/W2150062453.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1493454437","https://openalex.org/W1578379794","https://openalex.org/W1673310716","https://openalex.org/W1992419399","https://openalex.org/W2007995029","https://openalex.org/W2011430131","https://openalex.org/W2011832962","https://openalex.org/W2033403400","https://openalex.org/W2071759662","https://openalex.org/W2096541451","https://openalex.org/W2114910510","https://openalex.org/W2125852558","https://openalex.org/W2145268499","https://openalex.org/W2149029960","https://openalex.org/W2156174513","https://openalex.org/W2163895365","https://openalex.org/W2999729612"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829"],"abstract_inverted_index":{"In":[0],"this":[1],"paper":[2],"we":[3],"present":[4],"a":[5],"new":[6],"optimized":[7],"implementation":[8],"of":[9],"the":[10,18],"PFClust":[11],"algorithm":[12],"that":[13],"runs":[14],"considerably":[15],"faster":[16],"than":[17],"original.":[19]},"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
