{"id":"https://openalex.org/W2125745905","doi":"https://doi.org/10.1186/1751-0473-2-2","title":"HitKeeper, a generic software package for hit list management","display_name":"HitKeeper, a generic software package for hit list management","publication_year":2007,"publication_date":"2007-03-28","ids":{"openalex":"https://openalex.org/W2125745905","doi":"https://doi.org/10.1186/1751-0473-2-2","mag":"2125745905","pmid":"https://pubmed.ncbi.nlm.nih.gov/17391514"},"language":"en","primary_location":{"id":"doi:10.1186/1751-0473-2-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-2-2","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-2-2","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-2-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055026796","display_name":"J\u00f6rg Hau","orcid":null},"institutions":[{"id":"https://openalex.org/I4210093414","display_name":"Bioanalytica (Switzerland)","ror":"https://ror.org/004ea6c05","country_code":"CH","type":"company","lineage":["https://openalex.org/I4210093414"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I4210112383","display_name":"Nestl\u00e9 (Switzerland)","ror":"https://ror.org/01v5xwf23","country_code":"CH","type":"company","lineage":["https://openalex.org/I4210112383"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"J\u00f6rg Hau","raw_affiliation_strings":["Swiss Institute of Bioinformatics, Vital-IT group, CH-1015 Lausanne, Switzerland. joerg.hau@rdls.nestle.com","Department of BioAnalytical Science, Nestl\u00e9 Research Center, Lausanne 26, Switzerland"],"affiliations":[{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT group, CH-1015 Lausanne, Switzerland. joerg.hau@rdls.nestle.com","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of BioAnalytical Science, Nestl\u00e9 Research Center, Lausanne 26, Switzerland","institution_ids":["https://openalex.org/I4210093414","https://openalex.org/I4210112383"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100725135","display_name":"Michael M\u00fcller","orcid":"https://orcid.org/0000-0002-5930-9905"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Michael Muller","raw_affiliation_strings":["EPFL Database Laboratory, CH-1015, Lausanne, Switzerland","EPFL Database Laboratory, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"EPFL Database Laboratory, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"EPFL Database Laboratory, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006006798","display_name":"Marco Pagni","orcid":"https://orcid.org/0000-0001-9292-9463"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Marco Pagni","raw_affiliation_strings":["Swiss Institute of Bioinformatics, Vital-IT group, CH-1015, Lausanne, Switzerland","Swiss Institute of Bioinformatics, Vital-IT group, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT group, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055026796"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I4210093414","https://openalex.org/I4210112383"],"apc_list":null,"apc_paid":null,"fwci":0.9372,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.74048424,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2","issue":"1","first_page":"2","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8447310924530029},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.7830746173858643},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6025398969650269},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5739706158638},{"id":"https://openalex.org/keywords/redundancy","display_name":"Redundancy (engineering)","score":0.5698535442352295},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5635271668434143},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5306284427642822},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5142595171928406},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.512372612953186},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.45793771743774414},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2934495806694031},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20441555976867676},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.17896360158920288},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14962005615234375}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8447310924530029},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.7830746173858643},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6025398969650269},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5739706158638},{"id":"https://openalex.org/C152124472","wikidata":"https://www.wikidata.org/wiki/Q1204361","display_name":"Redundancy (engineering)","level":2,"score":0.5698535442352295},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5635271668434143},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5306284427642822},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5142595171928406},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.512372612953186},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.45793771743774414},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2934495806694031},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20441555976867676},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.17896360158920288},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14962005615234375},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1751-0473-2-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-2-2","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-2-2","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},{"id":"pmid:17391514","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17391514","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source code for biology and medicine","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:1852800","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1852800","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code Biol Med","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1751-0473-2-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1751-0473-2-2","pdf_url":"https://scfbm.biomedcentral.com/counter/pdf/10.1186/1751-0473-2-2","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Source Code for Biology and Medicine","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2125745905.pdf","grobid_xml":"https://content.openalex.org/works/W2125745905.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1982481323","https://openalex.org/W1996423252","https://openalex.org/W2041084399","https://openalex.org/W2096525273","https://openalex.org/W2119195082","https://openalex.org/W2145445013","https://openalex.org/W2161732286","https://openalex.org/W4230903726","https://openalex.org/W4247964656"],"related_works":["https://openalex.org/W4381571608","https://openalex.org/W2936116675","https://openalex.org/W2291027050","https://openalex.org/W2307569040","https://openalex.org/W1018570427","https://openalex.org/W1483126190","https://openalex.org/W2074162075","https://openalex.org/W4242570880","https://openalex.org/W2867972286","https://openalex.org/W2323949201"],"abstract_inverted_index":{"The":[0],"software":[1],"provides":[2],"a":[3],"generic":[4],"and":[5,12,18,29,39],"modular":[6],"framework":[7],"to":[8],"handle":[9],"the":[10,27,35],"redundancy":[11],"incremental":[13],"updates":[14],"of":[15,31,34],"biological":[16],"databases,":[17],"an":[19],"original":[20],"query":[21],"language.":[22],"It":[23],"is":[24],"published":[25],"under":[26],"terms":[28],"conditions":[30],"version":[32],"2":[33],"GNU":[36],"Public":[37],"License":[38],"available":[40],"at":[41],"http://hitkeeper.sourceforge.net.":[42]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}
