{"id":"https://openalex.org/W2113710106","doi":"https://doi.org/10.1186/1748-7188-5-32","title":"Gravitation field algorithm and its application in gene cluster","display_name":"Gravitation field algorithm and its application in gene cluster","publication_year":2010,"publication_date":"2010-09-20","ids":{"openalex":"https://openalex.org/W2113710106","doi":"https://doi.org/10.1186/1748-7188-5-32","mag":"2113710106","pmid":"https://pubmed.ncbi.nlm.nih.gov/20854683"},"language":"en","primary_location":{"id":"doi:10.1186/1748-7188-5-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-32","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/1748-7188-5-32","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/track/pdf/10.1186/1748-7188-5-32","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002890940","display_name":"Ming Zheng","orcid":"https://orcid.org/0000-0002-3651-7701"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ming Zheng","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, China","College of Computer Science and Technology, Jilin University, Changchun, China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China;","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101576374","display_name":"Guixia Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Gui-xia Liu","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, China","College of Computer Science and Technology, Jilin University, Changchun, China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China;","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079746101","display_name":"Chunguang Zhou","orcid":"https://orcid.org/0000-0002-5269-2526"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chun-guang Zhou","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, China","College of Computer Science and Technology, Jilin University, Changchun, China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China;","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076665413","display_name":"Yanchun Liang","orcid":"https://orcid.org/0000-0002-1147-3968"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yan-chun Liang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, China","College of Computer Science and Technology, Jilin University, Changchun, China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China;","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064115095","display_name":"Yan Wang","orcid":"https://orcid.org/0000-0002-7426-5031"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Wang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, China","College of Computer Science and Technology, Jilin University, Changchun, China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China;","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5076665413","https://openalex.org/A5079746101","https://openalex.org/A5101576374"],"corresponding_institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":3.4532,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.92872924,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"32","last_page":"32"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.5310999751091003,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.5310999751091003,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10100","display_name":"Metaheuristic Optimization Algorithms Research","score":0.27129998803138733,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12391","display_name":"Artificial Immune Systems Applications","score":0.025200000032782555,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.6081757545471191},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5994487404823303},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5763182044029236},{"id":"https://openalex.org/keywords/gravitation","display_name":"Gravitation","score":0.48826122283935547},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4746333360671997},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34784188866615295},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1990603506565094},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.154272198677063},{"id":"https://openalex.org/keywords/astronomy","display_name":"Astronomy","score":0.10789453983306885},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.07786816358566284}],"concepts":[{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.6081757545471191},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5994487404823303},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5763182044029236},{"id":"https://openalex.org/C124017977","wikidata":"https://www.wikidata.org/wiki/Q11412","display_name":"Gravitation","level":2,"score":0.48826122283935547},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4746333360671997},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34784188866615295},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1990603506565094},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.154272198677063},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.10789453983306885},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.07786816358566284},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/1748-7188-5-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-32","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/1748-7188-5-32","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:20854683","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20854683","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:doaj.org/article:3ea51fc68bf0436c9f51903c982e1737","is_oa":true,"landing_page_url":"https://doaj.org/article/3ea51fc68bf0436c9f51903c982e1737","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms for Molecular Biology, Vol 5, Iss 1, p 32 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2949600","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2949600","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1748-7188-5-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-32","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/1748-7188-5-32","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G23590623","display_name":null,"funder_award_id":"60973092","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G481792029","display_name":"\u57fa\u4e8e\u57fa\u56e0\u8868\u8fbe\u6570\u636e\u5206\u6790\u7684\u8840\u6db2\u4e2d\u80bf\u7624\u590d\u5408\u5206\u5b50\u6807\u5fd7\u7269\u9884\u6d4b\u7814\u7a76","funder_award_id":"60903097","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6865145149","display_name":"pathway\u9884\u6d4b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"60873146","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321106","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934"},{"id":"https://openalex.org/F4320322300","display_name":"Jilin University","ror":"https://ror.org/00js3aw79"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2113710106.pdf","grobid_xml":"https://content.openalex.org/works/W2113710106.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1491702733","https://openalex.org/W1539819149","https://openalex.org/W1667069063","https://openalex.org/W1692367225","https://openalex.org/W1888884532","https://openalex.org/W1964164119","https://openalex.org/W1971784203","https://openalex.org/W2020377117","https://openalex.org/W2020999234","https://openalex.org/W2053166411","https://openalex.org/W2057279785","https://openalex.org/W2103453943","https://openalex.org/W2112925229","https://openalex.org/W2130542009","https://openalex.org/W2143049567","https://openalex.org/W2149755691","https://openalex.org/W2160303934","https://openalex.org/W2162232298","https://openalex.org/W2163296727","https://openalex.org/W2319660501","https://openalex.org/W2743122016","https://openalex.org/W3026285062","https://openalex.org/W4244895653"],"related_works":["https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2544423928","https://openalex.org/W2053286651","https://openalex.org/W2181743346","https://openalex.org/W2187401768","https://openalex.org/W2181413294","https://openalex.org/W2052122378","https://openalex.org/W4313731559","https://openalex.org/W2391240633"],"abstract_inverted_index":{"BACKGROUND:":[0],"Searching":[1],"optima":[2],"is":[3,60,151],"one":[4,134],"of":[5,42,72,100],"the":[6,40,63,77,98,105,109,124,144,160,164],"most":[7],"challenging":[8],"tasks":[9],"in":[10,85,97,123,130,148,167],"clustering":[11],"genes":[12],"from":[13,62,108],"available":[14,180],"experimental":[15],"data":[16],"or":[17],"given":[18],"functions.":[19,102,138],"SA,":[20],"GA,":[21],"PSO":[22],"and":[23,80,83,157,163,169,173],"other":[24],"similar":[25],"efficient":[26],"global":[27,125,161],"optimization":[28,52,89,146],"methods":[29],"are":[30,37,178],"used":[31,96,152],"by":[32,127],"biotechnologists.":[33],"All":[34],"these":[35,142],"algorithms":[36],"based":[38],"on":[39],"imitation":[41],"natural":[43],"phenomena.":[44],"RESULTS:":[45],"This":[46],"paper":[47,150],"proposes":[48],"a":[49],"novel":[50],"searching":[51],"algorithm":[53],"called":[54],"Gravitation":[55,78],"Field":[56],"Algorithm":[57],"(GFA)":[58],"which":[59],"derived":[61],"famous":[64],"astronomy":[65],"theory":[66],"Solar":[67],"Nebular":[68],"Disk":[69],"Model":[70],"(SNDM)":[71],"planetary":[73],"formation.":[74],"GFA":[75,92,103,119],"simulates":[76],"field":[79],"outperforms":[81],"GA":[82,158],"SA":[84,156,168],"some":[86],"multimodal":[87],"functions":[88],"problem.":[90],"And":[91],"also":[93],"can":[94],"be":[95,121],"forms":[99],"unimodal":[101],"clusters":[104],"dataset":[106],"well":[107],"Gene":[110],"Expression":[111],"Omnibus.":[112],"CONCLUSIONS:":[113],"The":[114],"mathematical":[115],"proof":[116],"demonstrates":[117],"that":[118],"could":[120],"convergent":[122],"optimum":[126],"probability":[128],"1":[129],"three":[131],"conditions":[132],"for":[133],"independent":[135],"variable":[136],"mass":[137],"In":[139],"addition":[140],"to":[141,153],"results,":[143],"fundamental":[145],"concept":[147],"this":[149],"analyze":[154],"how":[155],"affect":[159],"search":[162],"inherent":[165],"defects":[166],"GA.":[170],"Some":[171],"results":[172],"source":[174],"code":[175],"(in":[176],"Matlab)":[177],"publicly":[179],"at":[181],"http://ccst.jlu.edu.cn/CSBG/GFA.":[182]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":4}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
