{"id":"https://openalex.org/W2168535963","doi":"https://doi.org/10.1186/1748-7188-5-14","title":"ANMM4CBR: a case-based reasoning method for gene expression data classification","display_name":"ANMM4CBR: a case-based reasoning method for gene expression data classification","publication_year":2010,"publication_date":"2010-01-06","ids":{"openalex":"https://openalex.org/W2168535963","doi":"https://doi.org/10.1186/1748-7188-5-14","mag":"2168535963","pmid":"https://pubmed.ncbi.nlm.nih.gov/20051140"},"language":"en","primary_location":{"id":"doi:10.1186/1748-7188-5-14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-14","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-5-14","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-5-14","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111952001","display_name":"Bangpeng Yao","orcid":null},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bangpeng Yao","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics and Bioinformatics Division, TNLIST/Department of Automation, Tsinghua University, Beijing 100084, PR China","MOE Key Laboratory of Bioinformatics and Bioinformatics Division TNLIST/Department of Automation, Tsinghua University, Beijing, 100084, PR, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics and Bioinformatics Division, TNLIST/Department of Automation, Tsinghua University, Beijing 100084, PR China","institution_ids":["https://openalex.org/I99065089"]},{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics and Bioinformatics Division TNLIST/Department of Automation, Tsinghua University, Beijing, 100084, PR, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076576399","display_name":"Shao Li","orcid":"https://orcid.org/0000-0002-8709-9167"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shao Li","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics and Bioinformatics Division TNLIST/Department of Automation, Tsinghua University, Beijing, 100084, PR, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics and Bioinformatics Division TNLIST/Department of Automation, Tsinghua University, Beijing, 100084, PR, China","institution_ids":["https://openalex.org/I99065089"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5076576399"],"corresponding_institution_ids":["https://openalex.org/I99065089"],"apc_list":{"value":1490,"currency":"GBP","value_usd":2290},"apc_paid":{"value":1490,"currency":"GBP","value_usd":2290},"fwci":0.6223,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.67530335,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"5","issue":"1","first_page":"14","last_page":"14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9660000205039978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9660000205039978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.00570000009611249,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.0031999999191612005,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7804226875305176},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.6718852519989014},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.6237583160400391},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6226907968521118},{"id":"https://openalex.org/keywords/curse-of-dimensionality","display_name":"Curse of dimensionality","score":0.5935322046279907},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5927411913871765},{"id":"https://openalex.org/keywords/margin","display_name":"Margin (machine learning)","score":0.5711350440979004},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5683827996253967},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5315501689910889},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.49835920333862305},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.47222378849983215},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.4540584087371826},{"id":"https://openalex.org/keywords/nonparametric-statistics","display_name":"Nonparametric statistics","score":0.4496380686759949},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10564890503883362}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7804226875305176},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.6718852519989014},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.6237583160400391},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6226907968521118},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.5935322046279907},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5927411913871765},{"id":"https://openalex.org/C774472","wikidata":"https://www.wikidata.org/wiki/Q6760393","display_name":"Margin (machine learning)","level":2,"score":0.5711350440979004},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5683827996253967},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5315501689910889},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.49835920333862305},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.47222378849983215},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.4540584087371826},{"id":"https://openalex.org/C102366305","wikidata":"https://www.wikidata.org/wiki/Q1097688","display_name":"Nonparametric statistics","level":2,"score":0.4496380686759949},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10564890503883362},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/1748-7188-5-14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-14","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-5-14","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:20051140","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20051140","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:doaj.org/article:dadfa4e49b4f48eab18e840e6599c955","is_oa":true,"landing_page_url":"https://doaj.org/article/dadfa4e49b4f48eab18e840e6599c955","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms for Molecular Biology, Vol 5, Iss 1, p 14 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2843690","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2843690","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1748-7188-5-14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-5-14","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-5-14","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2168535963.pdf","grobid_xml":"https://content.openalex.org/works/W2168535963.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W51251913","https://openalex.org/W1500151553","https://openalex.org/W1561789977","https://openalex.org/W1631913055","https://openalex.org/W1727290854","https://openalex.org/W1963913493","https://openalex.org/W1966701961","https://openalex.org/W1988790447","https://openalex.org/W1998871699","https://openalex.org/W2016799976","https://openalex.org/W2037460646","https://openalex.org/W2046914656","https://openalex.org/W2081776774","https://openalex.org/W2085535170","https://openalex.org/W2087684630","https://openalex.org/W2096863518","https://openalex.org/W2105359923","https://openalex.org/W2108728387","https://openalex.org/W2109363337","https://openalex.org/W2116811581","https://openalex.org/W2122411895","https://openalex.org/W2122726174","https://openalex.org/W2123172482","https://openalex.org/W2126385963","https://openalex.org/W2131987814","https://openalex.org/W2135677493","https://openalex.org/W2137476312","https://openalex.org/W2150926065","https://openalex.org/W2152503122","https://openalex.org/W2153678774","https://openalex.org/W2157875785","https://openalex.org/W2161419360","https://openalex.org/W2409772546","https://openalex.org/W4244934246"],"related_works":["https://openalex.org/W4243114048","https://openalex.org/W2529605301","https://openalex.org/W4237896776","https://openalex.org/W4231665652","https://openalex.org/W4296209631","https://openalex.org/W1837630526","https://openalex.org/W2000242494","https://openalex.org/W3124876457","https://openalex.org/W2012244993","https://openalex.org/W3122670876"],"abstract_inverted_index":{"BACKGROUND:":[0],"Accurate":[1],"classification":[2],"of":[3,16,28,90,143,186,198],"microarray":[4,70],"data":[5,153,181],"is":[6,50,65,119,132,146,192],"critical":[7],"for":[8,45,62,69],"successful":[9],"clinical":[10],"diagnosis":[11],"and":[12,19,125,151,173],"treatment.":[13],"The":[14,141,189],"\"curse":[15],"dimensionality\"":[17],"problem":[18],"noise":[20,136],"in":[21,52,96,137],"the":[22,26,73,77,100,138,158,180],"data,":[23],"however,":[24],"undermines":[25],"performance":[27],"many":[29],"algorithms.":[30],"METHOD:":[31],"In":[32],"order":[33,97],"to":[34,82,98,106,135],"obtain":[35,83],"a":[36,39,57,66,87,113,183],"robust":[37,134],"classifier,":[38],"novel":[40],"Additive":[41],"Nonparametric":[42],"Margin":[43],"Maximum":[44],"Case-Based":[46],"Reasoning":[47],"(ANMM4CBR)":[48],"method":[49,61,131,145,160],"proposed":[51],"this":[53,199],"article.":[54],"ANMM4CBR":[55,159],"employs":[56],"case-based":[58],"reasoning":[59],"(CBR)":[60],"classification.":[63],"CBR":[64],"suitable":[67],"paradigm":[68],"analysis,":[71],"where":[72],"rules":[74],"that":[75,157],"define":[76],"domain":[78],"knowledge":[79],"are":[80,93],"difficult":[81],"because":[84],"usually":[85],"only":[86],"small":[88],"number":[89],"training":[91],"samples":[92],"available.":[94],"Moreover,":[95],"select":[99],"most":[101],"informative":[102],"genes,":[103],"we":[104],"propose":[105],"perform":[107],"feature":[108,129],"selection":[109,130],"via":[110],"additively":[111],"optimizing":[112],"nonparametric":[114],"margin":[115],"maximum":[116],"criterion,":[117],"which":[118],"defined":[120],"based":[121],"on":[122,148],"gene":[123],"pre-selection":[124],"sample":[126],"clustering.":[127],"Our":[128],"very":[133],"data.":[139],"RESULTS:":[140],"effectiveness":[142],"our":[144],"demonstrated":[147],"both":[149],"simulated":[150],"real":[152],"sets.":[154],"We":[155],"show":[156],"performs":[161],"better":[162],"than":[163],"some":[164],"state-of-the-art":[165],"methods":[166],"such":[167],"as":[168,194],"support":[169],"vector":[170],"machine":[171],"(SVM)":[172],"k":[174],"nearest":[175],"neighbor":[176],"(kNN),":[177],"especially":[178],"when":[179],"contains":[182],"high":[184],"level":[185],"noise.":[187],"AVAILABILITY:":[188],"source":[190],"code":[191],"attached":[193],"an":[195],"additional":[196],"file":[197],"paper.":[200]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
