{"id":"https://openalex.org/W2125056339","doi":"https://doi.org/10.1186/1748-7188-2-8","title":"Consistency of the Neighbor-Net Algorithm","display_name":"Consistency of the Neighbor-Net Algorithm","publication_year":2007,"publication_date":"2007-06-28","ids":{"openalex":"https://openalex.org/W2125056339","doi":"https://doi.org/10.1186/1748-7188-2-8","mag":"2125056339","pmid":"https://pubmed.ncbi.nlm.nih.gov/17597551"},"language":"en","primary_location":{"id":"doi:10.1186/1748-7188-2-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-2-8","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-2-8","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-2-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075139465","display_name":"David Bryant","orcid":"https://orcid.org/0000-0003-1963-5535"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":true,"raw_author_name":"David Bryant","raw_affiliation_strings":["Department of Mathematics, University of Auckland, Private Bag 92019, Auckland, NZ. bryant@math.auckland.ac.nz","Department of Mathematics, University of Auckland, Auckland, NZ"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Auckland, Private Bag 92019, Auckland, NZ. bryant@math.auckland.ac.nz","institution_ids":["https://openalex.org/I154130895"]},{"raw_affiliation_string":"Department of Mathematics, University of Auckland, Auckland, NZ","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042929579","display_name":"Vincent Moulton","orcid":"https://orcid.org/0000-0001-9371-6435"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Vincent Moulton","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich, NR4 7TJ, UK","School of Computing Sciences, University of East Anglia, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, NR4 7TJ, UK","institution_ids":["https://openalex.org/I1118541"]},{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, UK","institution_ids":["https://openalex.org/I1118541"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025482166","display_name":"Andreas Spillner","orcid":"https://orcid.org/0000-0002-5343-7236"},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andreas Spillner","raw_affiliation_strings":["School of Computing Sciences, University of East Anglia, Norwich, NR4 7TJ, UK","School of Computing Sciences, University of East Anglia, Norwich, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, NR4 7TJ, UK","institution_ids":["https://openalex.org/I1118541"]},{"raw_affiliation_string":"School of Computing Sciences, University of East Anglia, Norwich, UK","institution_ids":["https://openalex.org/I1118541"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5075139465"],"corresponding_institution_ids":["https://openalex.org/I154130895"],"apc_list":{"value":1490,"currency":"GBP","value_usd":1827},"apc_paid":{"value":1490,"currency":"GBP","value_usd":1827},"fwci":0.941,"has_fulltext":true,"cited_by_count":38,"citation_normalized_percentile":{"value":0.74145666,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2","issue":"1","first_page":"8","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9602000117301941,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.835920512676239},{"id":"https://openalex.org/keywords/phylogenetic-network","display_name":"Phylogenetic network","score":0.8104054927825928},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.6542251706123352},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.6542184948921204},{"id":"https://openalex.org/keywords/net","display_name":"Net (polyhedron)","score":0.6246191263198853},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5826431512832642},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5800872445106506},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4701302945613861},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42636871337890625},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4045538604259491},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3584499955177307},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.308197557926178},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2852502465248108},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.20126214623451233},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09585943818092346},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07264786958694458}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.835920512676239},{"id":"https://openalex.org/C26619641","wikidata":"https://www.wikidata.org/wiki/Q3142246","display_name":"Phylogenetic network","level":4,"score":0.8104054927825928},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.6542251706123352},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.6542184948921204},{"id":"https://openalex.org/C14166107","wikidata":"https://www.wikidata.org/wiki/Q253829","display_name":"Net (polyhedron)","level":2,"score":0.6246191263198853},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5826431512832642},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5800872445106506},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4701302945613861},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42636871337890625},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4045538604259491},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3584499955177307},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.308197557926178},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2852502465248108},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.20126214623451233},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09585943818092346},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07264786958694458},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1186/1748-7188-2-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-2-8","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-2-8","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:17597551","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17597551","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:ueaeprints.uea.ac.uk:2952","is_oa":false,"landing_page_url":"https://ueaeprints.uea.ac.uk/id/eprint/2952/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.148.7834","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.148.7834","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.almob.org/content/pdf/1748-7188-2-8.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.276.571","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.276.571","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/96/e8/Algorithms_Mol_Biol_2007_Jun_28_2_8.tar.gz","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:fba05b1d8e384ea7a661cda96702acf1","is_oa":true,"landing_page_url":"https://doaj.org/article/fba05b1d8e384ea7a661cda96702acf1","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms for Molecular Biology, Vol 2, Iss 1, p 8 (2007)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1948893","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1948893","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"},{"id":"pmh:oai:researchspace.auckland.ac.nz:2292/3050","is_oa":true,"landing_page_url":"https://hdl.handle.net/2292/3050","pdf_url":null,"source":{"id":"https://openalex.org/S7407055463","display_name":"ResearchSpace (University of Auckland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I154130895","host_organization_name":"University of Auckland","host_organization_lineage":["https://openalex.org/I154130895"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1186/1748-7188-2-8","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1186/1748-7188-2-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1748-7188-2-8","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/1748-7188-2-8","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2125056339.pdf","grobid_xml":"https://content.openalex.org/works/W2125056339.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1583471982","https://openalex.org/W1981818930","https://openalex.org/W1989816352","https://openalex.org/W1998867815","https://openalex.org/W2016168023","https://openalex.org/W2055298722","https://openalex.org/W2097706568","https://openalex.org/W2100152398","https://openalex.org/W2113125314","https://openalex.org/W2119730621","https://openalex.org/W2120739444","https://openalex.org/W2130602914","https://openalex.org/W2136993061","https://openalex.org/W2154285126","https://openalex.org/W2159736064","https://openalex.org/W4205911826","https://openalex.org/W4233815609","https://openalex.org/W4388212639"],"related_works":["https://openalex.org/W4254268221","https://openalex.org/W2951650999","https://openalex.org/W2038264393","https://openalex.org/W147282674","https://openalex.org/W2112400707","https://openalex.org/W4300585845","https://openalex.org/W2101991559","https://openalex.org/W2152997891","https://openalex.org/W2951248153","https://openalex.org/W2840568513"],"abstract_inverted_index":{"In":[0,39],"general,":[1],"any":[2],"network":[3,32],"construction":[4],"method":[5,28],"should":[6,29],"not":[7],"depict":[8],"more":[9],"conflict":[10],"than":[11],"is":[12,21,34,59],"found":[13],"in":[14,56],"the":[15,19,27],"data,":[16],"and,":[17],"when":[18],"data":[20],"fitted":[22],"well":[23],"by":[24],"a":[25,31,44],"tree,":[26],"return":[30],"that":[33,47],"close":[35],"to":[36],"this":[37,40],"tree.":[38],"paper":[41],"we":[42],"provide":[43],"formal":[45],"proof":[46],"Neighbor-Net":[48,58],"satisfies":[49],"both":[50],"of":[51],"these":[52],"requirements":[53],"so":[54],"that,":[55],"particular,":[57],"statistically":[60],"consistent":[61],"on":[62],"circular":[63],"distances.":[64]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
