{"id":"https://openalex.org/W2150701714","doi":"https://doi.org/10.1186/1687-5281-2013-56","title":"Automatic Cryptosporidium and Giardia viability detection in treated water","display_name":"Automatic Cryptosporidium and Giardia viability detection in treated water","publication_year":2013,"publication_date":"2013-10-31","ids":{"openalex":"https://openalex.org/W2150701714","doi":"https://doi.org/10.1186/1687-5281-2013-56","mag":"2150701714"},"language":"en","primary_location":{"id":"doi:10.1186/1687-5281-2013-56","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1687-5281-2013-56","pdf_url":"https://jivp-eurasipjournals.springeropen.com/counter/pdf/10.1186/1687-5281-2013-56","source":{"id":"https://openalex.org/S153767265","display_name":"EURASIP Journal on Image and Video Processing","issn_l":"1687-5176","issn":["1687-5176","1687-5281"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Image and Video Processing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jivp-eurasipjournals.springeropen.com/counter/pdf/10.1186/1687-5281-2013-56","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004631606","display_name":"Shahriar Badsha","orcid":null},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]}],"countries":["MY"],"is_corresponding":true,"raw_author_name":"Shahriar Badsha","raw_affiliation_strings":["Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia"],"affiliations":[{"raw_affiliation_string":"Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia","institution_ids":["https://openalex.org/I33849332"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018208521","display_name":"Norrima Mokhtar","orcid":"https://orcid.org/0000-0002-2839-1336"},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Norrima Mokhtar","raw_affiliation_strings":["Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia"],"affiliations":[{"raw_affiliation_string":"Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia","institution_ids":["https://openalex.org/I33849332"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058437029","display_name":"Hamzah Arof","orcid":"https://orcid.org/0000-0003-2574-9037"},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Hamzah Arof","raw_affiliation_strings":["Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia"],"affiliations":[{"raw_affiliation_string":"Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia","institution_ids":["https://openalex.org/I33849332"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040225092","display_name":"Yvonne Ai Lian Lim","orcid":"https://orcid.org/0000-0003-4050-6332"},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Yvonne Ai Lian Lim","raw_affiliation_strings":["Department of Parasitology, University of Malaya, Kuala Lumpur, 50603, Malaysia"],"affiliations":[{"raw_affiliation_string":"Department of Parasitology, University of Malaya, Kuala Lumpur, 50603, Malaysia","institution_ids":["https://openalex.org/I33849332"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009491543","display_name":"Marizan Mubin","orcid":"https://orcid.org/0000-0001-7565-7822"},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Marizan Mubin","raw_affiliation_strings":["Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia"],"affiliations":[{"raw_affiliation_string":"Applied Control and Robotics Laboratory, Faculty of Engineering, University of Malaya, Kuala Lumpur, 50603, Malaysia","institution_ids":["https://openalex.org/I33849332"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030952292","display_name":"Zuwairie Ibrahim","orcid":"https://orcid.org/0000-0003-1641-3478"},"institutions":[{"id":"https://openalex.org/I102913810","display_name":"Universiti Malaysia Pahang Al-Sultan Abdullah","ror":"https://ror.org/01704wp68","country_code":"MY","type":"education","lineage":["https://openalex.org/I102913810"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Zuwairie Ibrahim","raw_affiliation_strings":["Faculty of Electrical & Electronic Engineering, Universiti Malaysia Pahang, Pekan, Pahang, 26600, Malaysia"],"affiliations":[{"raw_affiliation_string":"Faculty of Electrical & Electronic Engineering, Universiti Malaysia Pahang, Pekan, Pahang, 26600, Malaysia","institution_ids":["https://openalex.org/I102913810"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5004631606"],"corresponding_institution_ids":["https://openalex.org/I33849332"],"apc_list":{"value":1140,"currency":"GBP","value_usd":1398},"apc_paid":{"value":1140,"currency":"GBP","value_usd":1398},"fwci":0.3988,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.67952377,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2013","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.929099977016449,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5383706092834473},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5152414441108704},{"id":"https://openalex.org/keywords/giardia","display_name":"Giardia","score":0.501636266708374},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.486465185880661},{"id":"https://openalex.org/keywords/unsharp-masking","display_name":"Unsharp masking","score":0.4715592563152313},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.44631442427635193},{"id":"https://openalex.org/keywords/edge-detection","display_name":"Edge detection","score":0.4288441240787506},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.42814749479293823},{"id":"https://openalex.org/keywords/cryptosporidium","display_name":"Cryptosporidium","score":0.4199845492839813},{"id":"https://openalex.org/keywords/median-filter","display_name":"Median filter","score":0.41782256960868835},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3878073990345001},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37490177154541016},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3410167098045349},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.3392350375652313},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.13170990347862244},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.12007930874824524}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5383706092834473},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5152414441108704},{"id":"https://openalex.org/C2777271458","wikidata":"https://www.wikidata.org/wiki/Q1469628","display_name":"Giardia","level":2,"score":0.501636266708374},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.486465185880661},{"id":"https://openalex.org/C79052406","wikidata":"https://www.wikidata.org/wiki/Q365715","display_name":"Unsharp masking","level":4,"score":0.4715592563152313},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.44631442427635193},{"id":"https://openalex.org/C193536780","wikidata":"https://www.wikidata.org/wiki/Q1513153","display_name":"Edge detection","level":4,"score":0.4288441240787506},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42814749479293823},{"id":"https://openalex.org/C2778877831","wikidata":"https://www.wikidata.org/wiki/Q133078","display_name":"Cryptosporidium","level":3,"score":0.4199845492839813},{"id":"https://openalex.org/C55352655","wikidata":"https://www.wikidata.org/wiki/Q304247","display_name":"Median filter","level":4,"score":0.41782256960868835},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3878073990345001},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37490177154541016},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3410167098045349},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.3392350375652313},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.13170990347862244},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.12007930874824524},{"id":"https://openalex.org/C61716771","wikidata":"https://www.wikidata.org/wiki/Q496","display_name":"Feces","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1186/1687-5281-2013-56","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1687-5281-2013-56","pdf_url":"https://jivp-eurasipjournals.springeropen.com/counter/pdf/10.1186/1687-5281-2013-56","source":{"id":"https://openalex.org/S153767265","display_name":"EURASIP Journal on Image and Video Processing","issn_l":"1687-5176","issn":["1687-5176","1687-5281"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Image and Video Processing","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1186/1687-5281-2013-56","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1687-5281-2013-56","pdf_url":"https://jivp-eurasipjournals.springeropen.com/counter/pdf/10.1186/1687-5281-2013-56","source":{"id":"https://openalex.org/S153767265","display_name":"EURASIP Journal on Image and Video Processing","issn_l":"1687-5176","issn":["1687-5176","1687-5281"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EURASIP Journal on Image and Video Processing","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Clean water and sanitation","id":"https://metadata.un.org/sdg/6","score":0.8399999737739563}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321709","display_name":"Ministry of Higher Education, Malaysia","ror":"https://ror.org/05mcs2t73"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2150701714.pdf"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W806925721","https://openalex.org/W1604877397","https://openalex.org/W1614332721","https://openalex.org/W1799848036","https://openalex.org/W1826967329","https://openalex.org/W1855742513","https://openalex.org/W1989833373","https://openalex.org/W2061964141","https://openalex.org/W2122287830","https://openalex.org/W2125821270","https://openalex.org/W2135036909","https://openalex.org/W2138957397","https://openalex.org/W2414361185","https://openalex.org/W4229566915","https://openalex.org/W4256068510","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2164309059","https://openalex.org/W23451984","https://openalex.org/W2787706201","https://openalex.org/W2372904789","https://openalex.org/W2390117616","https://openalex.org/W3170567623","https://openalex.org/W2009778385","https://openalex.org/W2393397021","https://openalex.org/W2102922167","https://openalex.org/W2150701714"],"abstract_inverted_index":{"Abstract":[0],"In":[1],"the":[2,18,24,27,51,64,69,72,75,82,87,92,96,105,119,124,133],"automatic":[3],"detection":[4,93,156],"of":[5,26,71,108,121,126,135,160],"Cryptosporidium":[6],"and":[7,15,45,67,114,152,157,162],"Giardia":[8],"(oo)cysts":[9,97],"in":[10,17,123],"water":[11,150],"samples,":[12,151],"low":[13],"contrast":[14],"noise":[16,43,58,85],"microscopic":[19,145],"images":[20,146],"can":[21],"adversely":[22],"affect":[23],"accuracy":[25],"segmentation":[28],"results.":[29],"An":[30],"improved":[31],"partial":[32],"differential":[33],"equation":[34],"(PDE)":[35],"filtering":[36],"that":[37],"achieves":[38],"a":[39,100],"better":[40],"trade-off":[41],"between":[42],"removal":[44],"edge":[46,61],"preservation":[47],"is":[48,54,79,116,129,141],"introduced":[49],"where":[50],"compass":[52],"operator":[53],"utilized":[55],"to":[56,90,103,131],"attenuate":[57],"while":[59],"retaining":[60],"information":[62,78],"at":[63],"cytoplasm":[65,125],"wall":[66],"around":[68],"nuclei":[70,122],"(oo)cysts.":[73],"Then":[74],"anatomically":[76],"important":[77],"separated":[80],"from":[81,148],"unwanted":[83],"background":[84],"using":[86,110],"Otsu":[88],"method":[89],"improve":[91],"accuracy.":[94],"Once":[95],"are":[98],"located,":[99],"simple":[101],"technique":[102],"classify":[104],"two":[106],"types":[107],"protozoans":[109],"area,":[111],"roundness":[112],"metric":[113],"eccentricity":[115],"implemented.":[117],"Finally,":[118],"number":[120],"each":[127],"(oo)cyst":[128],"counted":[130],"check":[132],"viability":[134,158],"individual":[136],"parasite.":[137],"The":[138],"proposed":[139],"system":[140],"tested":[142],"on":[143],"40":[144],"obtained":[147],"treated":[149],"it":[153],"gives":[154],"excellent":[155],"rates":[159],"97%":[161],"98%,":[163],"respectively.":[164]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-01-15T23:16:33.117629","created_date":"2025-10-10T00:00:00"}
