{"id":"https://openalex.org/W2218329981","doi":"https://doi.org/10.1186/1472-6947-15-s5-s4","title":"Secure distributed genome analysis for GWAS and sequence comparison computation","display_name":"Secure distributed genome analysis for GWAS and sequence comparison computation","publication_year":2015,"publication_date":"2015-12-01","ids":{"openalex":"https://openalex.org/W2218329981","doi":"https://doi.org/10.1186/1472-6947-15-s5-s4","mag":"2218329981","pmid":"https://pubmed.ncbi.nlm.nih.gov/26733307"},"language":"en","primary_location":{"id":"doi:10.1186/1472-6947-15-s5-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1472-6947-15-s5-s4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/1472-6947-15-S5-S4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/1472-6947-15-S5-S4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008614366","display_name":"Yihua Zhang","orcid":"https://orcid.org/0000-0003-2378-7064"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yihua Zhang","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086333356","display_name":"Marina Blanton","orcid":"https://orcid.org/0009-0008-9934-2700"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marina Blanton","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110089414","display_name":"Ghada Almashaqbeh","orcid":null},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ghada Almashaqbeh","raw_affiliation_strings":["Department of Computer Science, Columbia University, New York, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Columbia University, New York, USA","institution_ids":["https://openalex.org/I78577930"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5008614366"],"corresponding_institution_ids":["https://openalex.org/I107639228"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":10.6835,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.98251893,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"15","issue":"S5","first_page":"S4","last_page":"S4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.746399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.746399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11504","display_name":"Advanced Authentication Protocols Security","score":0.05550000071525574,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.05290000140666962,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7534552812576294},{"id":"https://openalex.org/keywords/secure-multi-party-computation","display_name":"Secure multi-party computation","score":0.5415440201759338},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5271275639533997},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.44622039794921875},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44416871666908264},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38319647312164307},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3750772476196289},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.1488582193851471}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7534552812576294},{"id":"https://openalex.org/C18396474","wikidata":"https://www.wikidata.org/wiki/Q2465888","display_name":"Secure multi-party computation","level":3,"score":0.5415440201759338},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5271275639533997},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.44622039794921875},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44416871666908264},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38319647312164307},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3750772476196289},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.1488582193851471},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1472-6947-15-s5-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1472-6947-15-s5-s4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/1472-6947-15-S5-S4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:26733307","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26733307","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:europepmc.org:3685404","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4699166","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1472-6947-15-s5-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1472-6947-15-s5-s4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/1472-6947-15-S5-S4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4000000059604645,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1523888516","display_name":null,"funder_award_id":"FA9550-","funder_id":"https://openalex.org/F4320338279","funder_display_name":"Air Force Office of Scientific Research"},{"id":"https://openalex.org/G3319559045","display_name":"TWC: Small: Protecting Privacy of Biometric Data throughout Computation","funder_award_id":"1223699","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3513361554","display_name":null,"funder_award_id":"FA9550-13-1-0066","funder_id":"https://openalex.org/F4320338279","funder_display_name":"Air Force Office of Scientific Research"},{"id":"https://openalex.org/G5809100787","display_name":null,"funder_award_id":"FA9550","funder_id":"https://openalex.org/F4320338279","funder_display_name":"Air Force Office of Scientific Research"},{"id":"https://openalex.org/G6675558108","display_name":null,"funder_award_id":"1319090","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320338279","display_name":"Air Force Office of Scientific Research","ror":"https://ror.org/011e9bt93"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2218329981.pdf","grobid_xml":"https://content.openalex.org/works/W2218329981.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W27720104","https://openalex.org/W1480225633","https://openalex.org/W1485216661","https://openalex.org/W1485800369","https://openalex.org/W1508764330","https://openalex.org/W1579771234","https://openalex.org/W1591295894","https://openalex.org/W1972771074","https://openalex.org/W1997859100","https://openalex.org/W2036133214","https://openalex.org/W2081256122","https://openalex.org/W2088492763","https://openalex.org/W2110441888","https://openalex.org/W2141389982","https://openalex.org/W2141420453","https://openalex.org/W2398448180","https://openalex.org/W2530688139","https://openalex.org/W2567427072","https://openalex.org/W4299301436"],"related_works":["https://openalex.org/W2069340834","https://openalex.org/W2550686250","https://openalex.org/W2168325212","https://openalex.org/W1572523360","https://openalex.org/W2949471719","https://openalex.org/W2082804893","https://openalex.org/W2130457818","https://openalex.org/W1579564298","https://openalex.org/W2151178082","https://openalex.org/W2967603818"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"rapid":[2],"increase":[3],"in":[4,15,176],"the":[5,28,37,51,89,128],"availability":[6],"and":[7,73,131,149,153,167],"volume":[8],"of":[9,21,32,45,101,104,109,117,127,157,170],"genomic":[10,22,46,67,84,165,174],"data":[11,23,47,68,175],"makes":[12],"significant":[13],"advances":[14],"biomedical":[16],"research":[17,53,160],"possible,":[18],"but":[19],"sharing":[20,123],"poses":[24],"challenges":[25],"due":[26,137],"to":[27,138,162],"highly":[29],"sensitive":[30],"nature":[31],"such":[33],"data.":[34],"To":[35],"address":[36],"challenges,":[38],"a":[39,99,102],"competition":[40,91,161],"for":[41,62,69],"secure":[42,163],"distributed":[43],"processing":[44],"was":[48],"organized":[49],"by":[50,88],"iDASH":[52,90,158],"center.":[54],"METHODS:":[55],"In":[56],"this":[57],"work":[58,144],"we":[59],"propose":[60],"techniques":[61,119],"securing":[63],"computation":[64,81],"with":[65,173],"real-life":[66,164],"minor":[70],"allele":[71],"frequency":[72],"chi-squared":[74],"statistics":[75],"computation,":[76],"as":[77,79,86,155],"well":[78],"distance":[80],"between":[82],"two":[83],"sequences,":[85],"specified":[87],"tasks.":[92],"We":[93,113],"put":[94],"forward":[95],"novel":[96],"optimizations,":[97],"including":[98],"generalization":[100],"version":[103],"mergesort,":[105],"which":[106],"might":[107],"be":[108],"independent":[110],"interest.":[111],"RESULTS:":[112],"provide":[114],"implementation":[115],"results":[116,151],"our":[118,139,146],"based":[120],"on":[121,134],"secret":[122],"that":[124],"demonstrate":[125],"practicality":[126],"suggested":[129],"protocols":[130],"also":[132],"report":[133],"performance":[135],"improvements":[136],"optimization":[140],"techniques.":[141],"CONCLUSIONS:":[142],"This":[143],"describes":[145],"techniques,":[147],"findings,":[148],"experimental":[150],"developed":[152],"obtained":[154],"part":[156],"2015":[159],"computations":[166],"shows":[168],"feasibility":[169],"securely":[171],"computing":[172],"practice.":[177]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":5}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
