{"id":"https://openalex.org/W2076372724","doi":"https://doi.org/10.1186/1471-2164-13-s1-s15","title":"Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics","display_name":"Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics","publication_year":2012,"publication_date":"2012-01-17","ids":{"openalex":"https://openalex.org/W2076372724","doi":"https://doi.org/10.1186/1471-2164-13-s1-s15","mag":"2076372724","pmid":"https://pubmed.ncbi.nlm.nih.gov/22369646"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2164-13-s1-s15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-13-s1-s15","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-13-S1-S15","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-13-S1-S15","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071079252","display_name":"Trupti Joshi","orcid":"https://orcid.org/0000-0001-8944-4924"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Trupti Joshi","raw_affiliation_strings":["Department of Computer Science, University of Missouri, Columbia, MO 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043688179","display_name":"Kapil Patil","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kapil Patil","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026506550","display_name":"Michael R. Fitzpatrick","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael R Fitzpatrick","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111909365","display_name":"Levi D. Franklin","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Levi D Franklin","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049970842","display_name":"Qiuming Yao","orcid":"https://orcid.org/0000-0002-8056-3107"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qiuming Yao","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002161774","display_name":"Jeffery R. Cook","orcid":"https://orcid.org/0009-0001-3572-8267"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey R Cook","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100401128","display_name":"Zheng Wang","orcid":"https://orcid.org/0009-0000-6342-3084"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zheng Wang","raw_affiliation_strings":["Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000433156","display_name":"Marc Libault","orcid":"https://orcid.org/0000-0001-7419-9129"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marc Libault","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039264968","display_name":"Laurent Brechenmacher","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Laurent Brechenmacher","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076787745","display_name":"Babu Valliyodan","orcid":"https://orcid.org/0000-0001-9457-9508"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Babu Valliyodan","raw_affiliation_strings":["Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070487382","display_name":"Xiaolei Wu","orcid":"https://orcid.org/0000-0001-8270-7621"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaolei Wu","raw_affiliation_strings":["Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044354277","display_name":"Jianlin Cheng","orcid":"https://orcid.org/0000-0003-0305-2853"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jianlin Cheng","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","Informatics Institute, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Informatics Institute, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015973388","display_name":"Gary Stacey","orcid":"https://orcid.org/0000-0001-5914-2247"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gary Stacey","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045241930","display_name":"Henry T. Nguyen","orcid":"https://orcid.org/0000-0002-7597-1800"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henry T Nguyen","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082428303","display_name":"Dong Xu","orcid":"https://orcid.org/0000-0002-4809-0514"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong Xu","raw_affiliation_strings":["Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","Informatics Institute, University of Missouri, Columbia, MO, 65211, USA","National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Informatics Institute, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"National Center for Soybean Biotechnology, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":15,"corresponding_author_ids":["https://openalex.org/A5071079252"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":16.5613,"has_fulltext":true,"cited_by_count":130,"citation_normalized_percentile":{"value":0.9924453,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"13","issue":"S1","first_page":"S15","last_page":"S15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12571","display_name":"Soybean genetics and cultivation","score":0.5910000205039978,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12571","display_name":"Soybean genetics and cultivation","score":0.5910000205039978,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11318","display_name":"Phytoestrogen effects and research","score":0.06930000334978104,"subfield":{"id":"https://openalex.org/subfields/2734","display_name":"Pathology and Forensic Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13984","display_name":"Nutrition, Genetics, and Disease","score":0.03099999949336052,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6050048470497131},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.5939251184463501},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5935673713684082},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.5346656441688538},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5307695269584656},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.5274059176445007},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"Functional genomics","score":0.5028154253959656},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4997677803039551},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.44980162382125854},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43478280305862427},{"id":"https://openalex.org/keywords/web-resource","display_name":"Web resource","score":0.42555394768714905},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3530273139476776},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3502466678619385},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3390403091907501},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.273567795753479},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23874962329864502},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20993754267692566}],"concepts":[{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6050048470497131},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.5939251184463501},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5935673713684082},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.5346656441688538},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5307695269584656},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.5274059176445007},{"id":"https://openalex.org/C161078062","wikidata":"https://www.wikidata.org/wiki/Q1068690","display_name":"Functional genomics","level":5,"score":0.5028154253959656},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4997677803039551},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.44980162382125854},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43478280305862427},{"id":"https://openalex.org/C65603577","wikidata":"https://www.wikidata.org/wiki/Q3427877","display_name":"Web resource","level":2,"score":0.42555394768714905},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3530273139476776},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3502466678619385},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3390403091907501},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.273567795753479},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23874962329864502},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20993754267692566},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013025","descriptor_name":"Glycine max","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013025","descriptor_name":"Glycine max","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013025","descriptor_name":"Glycine max","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013025","descriptor_name":"Glycine max","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013025","descriptor_name":"Glycine max","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2164-13-s1-s15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-13-s1-s15","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-13-S1-S15","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},{"id":"pmid:22369646","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22369646","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC genomics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3303740","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3303740","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2164-13-s1-s15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-13-s1-s15","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-13-S1-S15","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.41999998688697815,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G4857082872","display_name":null,"funder_award_id":"DBI-0421620","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320313191","display_name":"United Soybean Board","ror":"https://ror.org/03az66838"},{"id":"https://openalex.org/F4320334017","display_name":"Missouri Soybean Merchandising Council","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2076372724.pdf","grobid_xml":"https://content.openalex.org/works/W2076372724.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1976446643","https://openalex.org/W1986662234","https://openalex.org/W2000941677","https://openalex.org/W2009842075","https://openalex.org/W2012986985","https://openalex.org/W2020541351","https://openalex.org/W2024858956","https://openalex.org/W2032283581","https://openalex.org/W2033913895","https://openalex.org/W2035806597","https://openalex.org/W2087373058","https://openalex.org/W2097591011","https://openalex.org/W2101145091","https://openalex.org/W2101358667","https://openalex.org/W2105781815","https://openalex.org/W2119550029","https://openalex.org/W2128016314","https://openalex.org/W2141729174","https://openalex.org/W2144914982","https://openalex.org/W2155471967","https://openalex.org/W2156032987","https://openalex.org/W2158266834","https://openalex.org/W2158962723","https://openalex.org/W2159482845","https://openalex.org/W2162891889","https://openalex.org/W2163965551","https://openalex.org/W2888534883","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2161069068","https://openalex.org/W3109437984","https://openalex.org/W2076485048","https://openalex.org/W2137839422","https://openalex.org/W1972257067","https://openalex.org/W2152320398","https://openalex.org/W2150533177","https://openalex.org/W4238306487","https://openalex.org/W2396992196","https://openalex.org/W3034139913"],"abstract_inverted_index":{"BACKGROUND:":[0],"Soybean":[1],"Knowledge":[2],"Base":[3],"(SoyKB)":[4],"is":[5,16],"a":[6,129,167,181],"comprehensive":[7],"all-inclusive":[8],"web":[9,131,173],"resource":[10,174],"for":[11,89,175],"soybean":[12,25,149,162],"translational":[13,171],"genomics.":[14],"SoyKB":[15,57,155,184],"designed":[17],"to":[18,106,117,124,147,165],"handle":[19],"the":[20,125,148,157,161],"management":[21],"and":[22,29,38,51,77,86,92,108,137,152,170,178],"integration":[23],"of":[24,35,98,104,114,160],"genomics,":[26],"transcriptomics,":[27],"proteomics":[28],"metabolomics":[30],"data":[31,91,142],"along":[32],"with":[33,134],"annotation":[34],"gene":[36,68],"function":[37],"biological":[39],"pathway.":[40],"It":[41,94,111,127],"contains":[42],"information":[43,176],"on":[44],"four":[45,96],"entities,":[46],"namely":[47],"genes,":[48],"microRNAs,":[49],"metabolites":[50],"single":[52],"nucleotide":[53],"polymorphisms":[54],"(SNPs).":[55],"METHODS:":[56],"has":[58,95,128],"many":[59],"useful":[60],"tools":[61],"such":[62],"as":[63,82,84],"Affymetrix":[64],"probe":[65],"ID":[66],"search,":[67,70],"family":[69],"multiple":[71],"gene/metabolite":[72],"search":[73],"supporting":[74],"co-expression":[75],"analysis,":[76],"protein":[78],"3D":[79],"structure":[80],"viewer":[81],"well":[83],"download":[85],"upload":[87],"capacity":[88],"experimental":[90],"annotations.":[93],"tiers":[97],"registration,":[99],"which":[100,140],"control":[101],"different":[102],"levels":[103,116],"access":[105],"public":[107],"private":[109],"data.":[110,126],"allows":[112],"users":[113],"certain":[115],"share":[118],"their":[119],"expertise":[120],"by":[121],"adding":[122],"comments":[123],"user-friendly":[130,182],"interface":[132],"together":[133],"genome":[135],"browser":[136],"pathway":[138],"viewer,":[139],"display":[141],"in":[143,180],"an":[144],"intuitive":[145],"manner":[146],"researchers,":[150],"producers":[151],"consumers.":[153],"CONCLUSIONS:":[154],"addresses":[156],"increasing":[158],"need":[159],"research":[163],"community":[164],"have":[166],"one-stop-shop":[168],"functional":[169],"omics":[172],"retrieval":[177],"analysis":[179],"way.":[183],"can":[185],"be":[186],"publicly":[187],"accessed":[188],"at":[189],"http://soykb.org/.":[190]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":13},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":16},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":13},{"year":2012,"cited_by_count":5}],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2025-10-10T00:00:00"}
