{"id":"https://openalex.org/W2085306687","doi":"https://doi.org/10.1186/1471-2105-9-s4-s2","title":"Terminologies for text-mining; an experiment in the lipoprotein metabolism domain","display_name":"Terminologies for text-mining; an experiment in the lipoprotein metabolism domain","publication_year":2008,"publication_date":"2008-04-01","ids":{"openalex":"https://openalex.org/W2085306687","doi":"https://doi.org/10.1186/1471-2105-9-s4-s2","mag":"2085306687","pmid":"https://pubmed.ncbi.nlm.nih.gov/18460175"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-s4-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s4-s2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S4-S2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S4-S2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004567684","display_name":"Dimitra Alexopoulou","orcid":"https://orcid.org/0000-0002-3715-1756"},"institutions":[{"id":"https://openalex.org/I4405272450","display_name":"Biotechnologisches Zentrum","ror":"https://ror.org/046b28292","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Dimitra Alexopoulou","raw_affiliation_strings":["Biotechnology Center, Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany. dimitra.alexopoulou@biotec.tu-dresden.de","Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Center, Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany. dimitra.alexopoulou@biotec.tu-dresden.de","institution_ids":["https://openalex.org/I78650965"]},{"raw_affiliation_string":"Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083599531","display_name":"Thomas W\u00e4chter","orcid":null},"institutions":[{"id":"https://openalex.org/I4405272450","display_name":"Biotechnologisches Zentrum","ror":"https://ror.org/046b28292","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas W\u00e4chter","raw_affiliation_strings":["Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany","Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany","institution_ids":["https://openalex.org/I78650965"]},{"raw_affiliation_string":"Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017711181","display_name":"Laura Pickersgill","orcid":null},"institutions":[{"id":"https://openalex.org/I1342131907","display_name":"Unilever (United Kingdom)","ror":"https://ror.org/05n8ah907","country_code":"GB","type":"company","lineage":["https://openalex.org/I1342131907"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Laura Pickersgill","raw_affiliation_strings":["Unilever Corporate Research, Colworth, MK44 1LQ, UK","Unilever Corporate Research, Colworth, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unilever Corporate Research, Colworth, MK44 1LQ, UK","institution_ids":["https://openalex.org/I1342131907"]},{"raw_affiliation_string":"Unilever Corporate Research, Colworth, UK","institution_ids":["https://openalex.org/I1342131907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071813545","display_name":"Cecilia Eyre","orcid":null},"institutions":[{"id":"https://openalex.org/I1342131907","display_name":"Unilever (United Kingdom)","ror":"https://ror.org/05n8ah907","country_code":"GB","type":"company","lineage":["https://openalex.org/I1342131907"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Cecilia Eyre","raw_affiliation_strings":["Unilever \u2013 Safety and Environmental Assurance Centre, Colworth, MK44 1LQ, UK","Unilever \u2013 Safety and Environmental Assurance Centre, Colworth, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unilever \u2013 Safety and Environmental Assurance Centre, Colworth, MK44 1LQ, UK","institution_ids":["https://openalex.org/I1342131907"]},{"raw_affiliation_string":"Unilever \u2013 Safety and Environmental Assurance Centre, Colworth, UK","institution_ids":["https://openalex.org/I1342131907"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016411406","display_name":"Michael Schroeder","orcid":"https://orcid.org/0000-0003-2848-6949"},"institutions":[{"id":"https://openalex.org/I4405272450","display_name":"Biotechnologisches Zentrum","ror":"https://ror.org/046b28292","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Schroeder","raw_affiliation_strings":["Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany","Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, Dresden, D-01062, Germany","institution_ids":["https://openalex.org/I78650965"]},{"raw_affiliation_string":"Biotechnology Center (BIOTEC) Technische Universit\u00e4t Dresden, Dresden, Germany","institution_ids":["https://openalex.org/I4405272450","https://openalex.org/I78650965"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5004567684"],"corresponding_institution_ids":["https://openalex.org/I4405272450","https://openalex.org/I78650965"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.4695,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.8924465,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"9","issue":"S4","first_page":"S2","last_page":"S2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.005100000184029341,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.003700000001117587,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7761291861534119},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7095198035240173},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.6250669360160828},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.601331353187561},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.5810739398002625},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5566763877868652},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.5367321968078613},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.49318212270736694},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.48635345697402954},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.445048987865448},{"id":"https://openalex.org/keywords/tf\u2013idf","display_name":"tf\u2013idf","score":0.4283807575702667},{"id":"https://openalex.org/keywords/intuition","display_name":"Intuition","score":0.4274284839630127},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.42706558108329773},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4173658788204193},{"id":"https://openalex.org/keywords/suggested-upper-merged-ontology","display_name":"Suggested Upper Merged Ontology","score":0.38244637846946716},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.3818325698375702},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38040465116500854},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3791828453540802},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.2567710280418396},{"id":"https://openalex.org/keywords/term","display_name":"Term (time)","score":0.25387078523635864},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.09949854016304016}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7761291861534119},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7095198035240173},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.6250669360160828},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.601331353187561},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.5810739398002625},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5566763877868652},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.5367321968078613},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.49318212270736694},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.48635345697402954},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.445048987865448},{"id":"https://openalex.org/C81758059","wikidata":"https://www.wikidata.org/wiki/Q796584","display_name":"tf\u2013idf","level":3,"score":0.4283807575702667},{"id":"https://openalex.org/C132010649","wikidata":"https://www.wikidata.org/wiki/Q189222","display_name":"Intuition","level":2,"score":0.4274284839630127},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.42706558108329773},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4173658788204193},{"id":"https://openalex.org/C50971890","wikidata":"https://www.wikidata.org/wiki/Q7635093","display_name":"Suggested Upper Merged Ontology","level":4,"score":0.38244637846946716},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.3818325698375702},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38040465116500854},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3791828453540802},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2567710280418396},{"id":"https://openalex.org/C61797465","wikidata":"https://www.wikidata.org/wiki/Q1188986","display_name":"Term (time)","level":2,"score":0.25387078523635864},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.09949854016304016},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008074","descriptor_name":"Lipoproteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-9-s4-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s4-s2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S4-S2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18460175","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18460175","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2367629","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2367629","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-s4-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s4-s2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S4-S2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5899999737739563,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2085306687.pdf","grobid_xml":"https://content.openalex.org/works/W2085306687.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W22182018","https://openalex.org/W200092697","https://openalex.org/W1516346799","https://openalex.org/W1537696678","https://openalex.org/W1552651695","https://openalex.org/W1555354714","https://openalex.org/W1642891250","https://openalex.org/W1748928863","https://openalex.org/W1757909678","https://openalex.org/W1829379010","https://openalex.org/W1845814381","https://openalex.org/W1994100378","https://openalex.org/W1997585114","https://openalex.org/W2013223025","https://openalex.org/W2025288035","https://openalex.org/W2038721957","https://openalex.org/W2041428546","https://openalex.org/W2049107599","https://openalex.org/W2053673723","https://openalex.org/W2068737686","https://openalex.org/W2088561970","https://openalex.org/W2103017472","https://openalex.org/W2109179237","https://openalex.org/W2112236650","https://openalex.org/W2112652344","https://openalex.org/W2114561888","https://openalex.org/W2115294179","https://openalex.org/W2123171788","https://openalex.org/W2127480960","https://openalex.org/W2132784310","https://openalex.org/W2144303444","https://openalex.org/W2148118756","https://openalex.org/W2156610741","https://openalex.org/W2156622158","https://openalex.org/W2158912860","https://openalex.org/W2159583324","https://openalex.org/W2163670493","https://openalex.org/W2175779775","https://openalex.org/W2412696399","https://openalex.org/W2605340330","https://openalex.org/W4205167092","https://openalex.org/W4235505822"],"related_works":["https://openalex.org/W26549824","https://openalex.org/W1506177826","https://openalex.org/W2127299687","https://openalex.org/W2732632690","https://openalex.org/W72173000","https://openalex.org/W2726617685","https://openalex.org/W2156556194","https://openalex.org/W2357775360","https://openalex.org/W4255991504","https://openalex.org/W2396086199"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,111,178,214],"engineering":[2],"of":[3,33,57,62,65,80,138,142,154,175,180],"ontologies,":[4],"especially":[5],"with":[6,98,152],"a":[7,10,15,24,51,81,136,199],"view":[8],"to":[9,86,118],"text-mining":[11],"use,":[12],"is":[13,218],"still":[14,130],"new":[16],"research":[17],"field.":[18],"There":[19],"does":[20],"not":[21],"yet":[22],"exist":[23,50],"well-defined":[25],"theory":[26],"and":[27,40,46,67,147,168,207],"technology":[28],"for":[29,89,172,192],"ontology":[30,35,84,96],"construction.":[31],"Many":[32],"the":[34,60,77,93,99,123,127,155,173,181,187,209],"design":[36],"steps":[37],"remain":[38],"manual":[39,78],"are":[41,145],"based":[42],"on":[43,54,186],"personal":[44],"experience":[45,74],"intuition.":[47],"However,":[48],"there":[49],"few":[52],"efforts":[53],"automatic":[55,106,161],"construction":[56],"ontologies":[58],"in":[59,198],"form":[61],"extracted":[63],"lists":[64],"terms":[66,97,115,126,144],"relations":[68],"between":[69],"them.":[70],"RESULTS:":[71],"We":[72,91],"share":[73],"acquired":[75],"during":[76],"development":[79,166,191],"lipoprotein":[82],"metabolism":[83],"(LMO)":[85],"be":[87,150,196],"used":[88],"text-mining.":[90],"compare":[92],"manually":[94],"created":[95],"automatically":[100],"derived":[101],"terminology":[102],"from":[103],"four":[104],"different":[105],"term":[107,216],"recognition":[108,217],"(ATR)":[109],"methods.":[110,156],"top":[112,124],"50":[113],"predicted":[114],"contain":[116],"up":[117],"89%":[119],"relevant":[120,133],"terms.":[121,134],"For":[122],"1000":[125],"best":[128],"method":[129],"generates":[131],"51%":[132],"In":[135],"corpus":[137],"3066":[139],"documents":[140],"53%":[141],"LMO":[143],"contained":[146],"38%":[148],"can":[149,163],"generated":[151],"one":[153],"CONCLUSIONS:":[157],"Given":[158],"high":[159],"precision,":[160],"methods":[162],"help":[164],"decrease":[165],"time":[167],"provide":[169],"significant":[170],"support":[171],"identification":[174],"domain-specific":[176],"vocabulary.":[177],"coverage":[179],"domain":[182],"vocabulary":[183],"depends":[184],"strongly":[185],"underlying":[188],"documents.":[189],"Ontology":[190],"text":[193],"mining":[194],"should":[195],"performed":[197],"semi-automatic":[200],"way;":[201],"taking":[202],"ATR":[203],"results":[204],"as":[205,220],"input":[206],"following":[208],"guidelines":[210],"we":[211],"described.":[212],"AVAILABILITY:":[213],"TFIDF":[215],"available":[219],"Web":[221],"Service,":[222],"described":[223],"at":[224],"http://gopubmed4.biotec.tu-dresden.de/IdavollWebService/services/CandidateTermGeneratorService?wsdl.":[225]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-25T17:18:41.151588","created_date":"2025-10-10T00:00:00"}
