{"id":"https://openalex.org/W2110585365","doi":"https://doi.org/10.1186/1471-2105-9-s12-s18","title":"Semi-automatic conversion of BioProp semantic annotation to PASBio annotation","display_name":"Semi-automatic conversion of BioProp semantic annotation to PASBio annotation","publication_year":2008,"publication_date":"2008-12-01","ids":{"openalex":"https://openalex.org/W2110585365","doi":"https://doi.org/10.1186/1471-2105-9-s12-s18","mag":"2110585365","pmid":"https://pubmed.ncbi.nlm.nih.gov/19091017"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-s12-s18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s12-s18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S12-S18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S12-S18","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030771512","display_name":"Richard Tzong\u2010Han Tsai","orcid":"https://orcid.org/0000-0003-0513-107X"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Richard Tzong-Han Tsai","raw_affiliation_strings":["Department of Computer Science & Engineering, Yuan Ze University, Chung-Li, Taiwan, R.O.C. thtsai@saturn.yzu.edu.tw","Department of Computer Science & Engineering, Yuan Ze University, Chung-Li, R.O.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, Yuan Ze University, Chung-Li, Taiwan, R.O.C. thtsai@saturn.yzu.edu.tw","institution_ids":["https://openalex.org/I99908691"]},{"raw_affiliation_string":"Department of Computer Science & Engineering, Yuan Ze University, Chung-Li, R.O.C","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037362113","display_name":"Hong-Jie Dai","orcid":"https://orcid.org/0000-0002-1516-7255"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]},{"id":"https://openalex.org/I84653119","display_name":"Academia Sinica","ror":"https://ror.org/05bxb3784","country_code":"TW","type":"facility","lineage":["https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Hong-Jie Dai","raw_affiliation_strings":["Department of Computer Science, National Tsing-Hua University, Hsinchu, R.O.C","Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National Tsing-Hua University, Hsinchu, R.O.C","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C","institution_ids":["https://openalex.org/I84653119"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028700026","display_name":"Chi-Hsin Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I84653119","display_name":"Academia Sinica","ror":"https://ror.org/05bxb3784","country_code":"TW","type":"facility","lineage":["https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Chi-Hsin Huang","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C","institution_ids":["https://openalex.org/I84653119"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112054430","display_name":"Wen-Lian Hsu","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]},{"id":"https://openalex.org/I84653119","display_name":"Academia Sinica","ror":"https://ror.org/05bxb3784","country_code":"TW","type":"facility","lineage":["https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Wen-Lian Hsu","raw_affiliation_strings":["Department of Computer Science, National Tsing-Hua University, Hsinchu, R.O.C","Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National Tsing-Hua University, Hsinchu, R.O.C","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Nankang, Taipei, R.O.C","institution_ids":["https://openalex.org/I84653119"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5028700026","https://openalex.org/A5030771512","https://openalex.org/A5037362113","https://openalex.org/A5112054430"],"corresponding_institution_ids":["https://openalex.org/I25846049","https://openalex.org/I84653119","https://openalex.org/I99908691"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1404,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.56300241,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"9","issue":"S12","first_page":"S18","last_page":"S18"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8709999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8709999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.08380000293254852,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.016499999910593033,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.851715087890625},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7871456146240234},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6971383094787598},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6126810908317566},{"id":"https://openalex.org/keywords/semantic-role-labeling","display_name":"Semantic role labeling","score":0.5538594722747803},{"id":"https://openalex.org/keywords/predicate","display_name":"Predicate (mathematical logic)","score":0.5261780023574829},{"id":"https://openalex.org/keywords/temporal-annotation","display_name":"Temporal annotation","score":0.512213408946991},{"id":"https://openalex.org/keywords/rule-based-system","display_name":"Rule-based system","score":0.4465571641921997},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35801568627357483},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.1510351598262787},{"id":"https://openalex.org/keywords/natural-language","display_name":"Natural language","score":0.1417461335659027},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11188498139381409}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.851715087890625},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7871456146240234},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6971383094787598},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6126810908317566},{"id":"https://openalex.org/C67277372","wikidata":"https://www.wikidata.org/wiki/Q7449085","display_name":"Semantic role labeling","level":3,"score":0.5538594722747803},{"id":"https://openalex.org/C140146324","wikidata":"https://www.wikidata.org/wiki/Q1144319","display_name":"Predicate (mathematical logic)","level":2,"score":0.5261780023574829},{"id":"https://openalex.org/C7044111","wikidata":"https://www.wikidata.org/wiki/Q15844891","display_name":"Temporal annotation","level":5,"score":0.512213408946991},{"id":"https://openalex.org/C149271511","wikidata":"https://www.wikidata.org/wiki/Q1417149","display_name":"Rule-based system","level":2,"score":0.4465571641921997},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35801568627357483},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.1510351598262787},{"id":"https://openalex.org/C195324797","wikidata":"https://www.wikidata.org/wiki/Q33742","display_name":"Natural language","level":2,"score":0.1417461335659027},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11188498139381409},{"id":"https://openalex.org/C14919245","wikidata":"https://www.wikidata.org/wiki/Q1976109","display_name":"Language technology","level":4,"score":0.0},{"id":"https://openalex.org/C129353971","wikidata":"https://www.wikidata.org/wiki/Q5156949","display_name":"Comprehension approach","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-9-s12-s18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s12-s18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S12-S18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19091017","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19091017","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:f303e18192ef4bada0b6e71bb9a24cff","is_oa":true,"landing_page_url":"https://doaj.org/article/f303e18192ef4bada0b6e71bb9a24cff","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss Suppl 12, p S18 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2638158","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2638158","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-s12-s18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s12-s18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S12-S18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.5199999809265137}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"},{"id":"https://openalex.org/F4320321041","display_name":"Academia Sinica","ror":"https://ror.org/05bxb3784"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2110585365.pdf","grobid_xml":"https://content.openalex.org/works/W2110585365.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W102233799","https://openalex.org/W186166080","https://openalex.org/W576001834","https://openalex.org/W900993354","https://openalex.org/W1535015163","https://openalex.org/W2043099927","https://openalex.org/W2067551521","https://openalex.org/W2067994019","https://openalex.org/W2078285016","https://openalex.org/W2092654472","https://openalex.org/W2096175520","https://openalex.org/W2113202266","https://openalex.org/W2121539402","https://openalex.org/W2122139846","https://openalex.org/W2126259921","https://openalex.org/W2126851059","https://openalex.org/W2158847908","https://openalex.org/W2159640576","https://openalex.org/W2161299591","https://openalex.org/W2231482247","https://openalex.org/W2553280805","https://openalex.org/W2740887992","https://openalex.org/W2885050925","https://openalex.org/W2915816387","https://openalex.org/W3082398767","https://openalex.org/W4231741839","https://openalex.org/W4365799947"],"related_works":["https://openalex.org/W2080575979","https://openalex.org/W4385569300","https://openalex.org/W48671780","https://openalex.org/W1994489417","https://openalex.org/W2369337446","https://openalex.org/W2573587940","https://openalex.org/W2061851981","https://openalex.org/W3145920652","https://openalex.org/W1990677253","https://openalex.org/W2121717955"],"abstract_inverted_index":{"BACKGROUND:":[0],"Semantic":[1],"role":[2],"labeling":[3],"(SRL)":[4],"is":[5,25,59],"an":[6,96,133,169,190,207],"important":[7],"text":[8],"analysis":[9],"technique.":[10],"In":[11,73,114,138],"SRL,":[12],"sentences":[13],"are":[14,88],"represented":[15],"by":[16],"one":[17],"or":[18,47,56],"more":[19,78],"predicate-argument":[20],"structures":[21],"(PAS).":[22],"Each":[23],"PAS":[24,64,82,219],"composed":[26],"of":[27,95,159,192,209,244],"a":[28,119,145,164],"predicate":[29],"(verb)":[30],"and":[31,66,80,168,223,235,251],"several":[32],"arguments":[33,45,53],"(noun":[34],"phrases,":[35,37],"adverbial":[36],"etc.)":[38],"with":[39,163],"different":[40],"semantic":[41],"roles,":[42],"including":[43],"main":[44],"(agent":[46],"patient)":[48],"as":[49,51,86],"well":[50],"adjunct":[52],"(time,":[54],"manner,":[55],"location).":[57],"PropBank":[58,125],"the":[60,70,74,93,124,242],"most":[61],"widely":[62],"used":[63],"corpus":[65,121],"annotation":[67,83,151,225],"format":[68],"in":[69,161],"newswire":[71],"domain.":[72],"biomedical":[75,120],"field,":[76],"however,":[77],"detailed":[79],"restrictive":[81],"formats":[84],"such":[85],"PASBio":[87,98,110,154,224,257],"popular.":[89],"Unfortunately,":[90],"due":[91],"to":[92,143,147,153],"lack":[94],"annotated":[97],"corpus,":[99],"no":[100],"publicly":[101],"available":[102],"machine-learning":[103],"(ML)":[104],"based":[105,108,122],"SRL":[106,135,249],"systems":[107,250],"on":[109,123,129],"have":[111],"been":[112],"developed.":[113],"previous":[115],"work,":[116],"we":[117,131,141],"constructed":[118],"standard":[126],"called":[127],"BioProp,":[128],"which":[130],"developed":[132,231],"ML-based":[134,248],"system,":[136],"BIOSMILE.":[137],"this":[139],"paper,":[140],"aim":[142],"build":[144],"system":[146,157,199,205,239],"convert":[148],"BIOSMILE's":[149],"BioProp":[150,222],"output":[152],"annotation.":[155],"Our":[156,175,216,238],"consists":[158],"BIOSMILE":[160,185,227],"combination":[162],"BioProp-PASBio":[165],"rule-based":[166,180,202,236],"converter,":[167],"additional":[170],"semi-automatic":[171,232],"rule":[172,233],"generator.":[173],"RESULTS:":[174],"first":[176],"experiment":[177,196],"evaluated":[178,197],"our":[179,229],"converter's":[181],"performance":[182,243],"independently":[183],"from":[184],"performance.":[186],"The":[187,194,204],"converter":[188],"achieved":[189,206],"F-score":[191,208],"85.29%.":[193],"second":[195],"combined":[198],"(BIOSMILE":[200],"+":[201],"converter).":[203],"69.08%":[210],"for":[211,256],"PASBio's":[212],"29":[213],"verbs.":[214],"CONCLUSION:":[215],"approach":[217],"allows":[218],"conversion":[220],"between":[221],"using":[226],"alongside":[228],"newly":[230],"generator":[234],"converter.":[237],"can":[240,252],"match":[241],"other":[245],"state-of-the-art":[246],"domain-specific":[247],"be":[253],"easily":[254],"customized":[255],"application":[258],"development.":[259]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
