{"id":"https://openalex.org/W1982464493","doi":"https://doi.org/10.1186/1471-2105-9-s11-s9","title":"The BioScope corpus: biomedical texts annotated for uncertainty, negation and their scopes","display_name":"The BioScope corpus: biomedical texts annotated for uncertainty, negation and their scopes","publication_year":2008,"publication_date":"2008-11-19","ids":{"openalex":"https://openalex.org/W1982464493","doi":"https://doi.org/10.1186/1471-2105-9-s11-s9","mag":"1982464493","pmid":"https://pubmed.ncbi.nlm.nih.gov/19025695"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-s11-s9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s11-s9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S11-S9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S11-S9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089012873","display_name":"Veronika Vincze","orcid":"https://orcid.org/0000-0002-9844-2194"},"institutions":[{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Veronika Vincze","raw_affiliation_strings":["University of Szeged, Department of Informatics, Human Language Technology Group, Arp\u00e1d t\u00e9r 2, Szeged, Hungary. vinczev@inf.u-szeged.hu","Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Szeged, Department of Informatics, Human Language Technology Group, Arp\u00e1d t\u00e9r 2, Szeged, Hungary. vinczev@inf.u-szeged.hu","institution_ids":["https://openalex.org/I227486990"]},{"raw_affiliation_string":"Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011272289","display_name":"Gy\u00f6rgy Szarvas","orcid":null},"institutions":[{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Gy\u00f6rgy Szarvas","raw_affiliation_strings":["Department of Informatics, Human Language Technology Group, University of Szeged, \u00c1rp\u00e1d t\u00e9r 2, Szeged, Hungary","Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Human Language Technology Group, University of Szeged, \u00c1rp\u00e1d t\u00e9r 2, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990"]},{"raw_affiliation_string":"Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076395593","display_name":"Rich\u00e1rd Farkas","orcid":"https://orcid.org/0000-0001-7019-2632"},"institutions":[{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]},{"id":"https://openalex.org/I4210152167","display_name":"MTA-SZTE Research Group on Artificial Intelligence","ror":"https://ror.org/0507fk326","country_code":"HU","type":"facility","lineage":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I7597260","display_name":"Hungarian Academy of Sciences","ror":"https://ror.org/02ks8qq67","country_code":"HU","type":"government","lineage":["https://openalex.org/I7597260"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Rich\u00e1rd Farkas","raw_affiliation_strings":["Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Aradi V\u00e9rtan\u00fak tere 1, Szeged, Hungary","Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Aradi V\u00e9rtan\u00fak tere 1, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]},{"raw_affiliation_string":"Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049533279","display_name":"Gy\u00f6rgy M\u00f3ra","orcid":null},"institutions":[{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Gy\u00f6rgy M\u00f3ra","raw_affiliation_strings":["Department of Informatics, Human Language Technology Group, University of Szeged, \u00c1rp\u00e1d t\u00e9r 2, Szeged, Hungary","Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Human Language Technology Group, University of Szeged, \u00c1rp\u00e1d t\u00e9r 2, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990"]},{"raw_affiliation_string":"Department of Informatics, Human Language Technology Group, University of Szeged, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065289106","display_name":"J\u00e1nos Csirik","orcid":"https://orcid.org/0000-0003-3870-0363"},"institutions":[{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]},{"id":"https://openalex.org/I4210152167","display_name":"MTA-SZTE Research Group on Artificial Intelligence","ror":"https://ror.org/0507fk326","country_code":"HU","type":"facility","lineage":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I7597260","display_name":"Hungarian Academy of Sciences","ror":"https://ror.org/02ks8qq67","country_code":"HU","type":"government","lineage":["https://openalex.org/I7597260"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"J\u00e1nos Csirik","raw_affiliation_strings":["Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Aradi V\u00e9rtan\u00fak tere 1, Szeged, Hungary","Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Aradi V\u00e9rtan\u00fak tere 1, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]},{"raw_affiliation_string":"Research Group on Artificial Intelligence of the Hungarian Academy of Sciences and, University of Szeged, Szeged, Hungary","institution_ids":["https://openalex.org/I227486990","https://openalex.org/I4210152167","https://openalex.org/I7597260"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5011272289","https://openalex.org/A5089012873"],"corresponding_institution_ids":["https://openalex.org/I227486990"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":9.3578,"has_fulltext":true,"cited_by_count":421,"citation_normalized_percentile":{"value":0.98677326,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"9","issue":"S11","first_page":"S9","last_page":"S9"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9575999975204468,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9575999975204468,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.006300000008195639,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13629","display_name":"Text Readability and Simplification","score":0.004800000227987766,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8349471092224121},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7762335538864136},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.699642539024353},{"id":"https://openalex.org/keywords/ambiguity","display_name":"Ambiguity","score":0.5937932729721069},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.5639652609825134},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5579034090042114},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.5348692536354065},{"id":"https://openalex.org/keywords/scope","display_name":"Scope (computer science)","score":0.4935232400894165},{"id":"https://openalex.org/keywords/scientific-writing","display_name":"Scientific writing","score":0.477615088224411},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4733937978744507},{"id":"https://openalex.org/keywords/negation","display_name":"Negation","score":0.4578607678413391},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4314756393432617},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.40610089898109436},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.377380907535553}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8349471092224121},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7762335538864136},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.699642539024353},{"id":"https://openalex.org/C2780522230","wikidata":"https://www.wikidata.org/wiki/Q1140419","display_name":"Ambiguity","level":2,"score":0.5937932729721069},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.5639652609825134},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5579034090042114},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.5348692536354065},{"id":"https://openalex.org/C2778012447","wikidata":"https://www.wikidata.org/wiki/Q1034415","display_name":"Scope (computer science)","level":2,"score":0.4935232400894165},{"id":"https://openalex.org/C2778949450","wikidata":"https://www.wikidata.org/wiki/Q1965486","display_name":"Scientific writing","level":2,"score":0.477615088224411},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4733937978744507},{"id":"https://openalex.org/C2185349","wikidata":"https://www.wikidata.org/wiki/Q190558","display_name":"Negation","level":2,"score":0.4578607678413391},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4314756393432617},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.40610089898109436},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.377380907535553},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-9-s11-s9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s11-s9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S11-S9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19025695","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19025695","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:publicatio.bibl.u-szeged.hu:8750","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400675","display_name":"SZTE Publicatio Repozit\u00f3rium (University of Szeged)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I227486990","host_organization_name":"University of Szeged","host_organization_lineage":["https://openalex.org/I227486990"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Cikk"},{"id":"pmh:oai:pubmedcentral.nih.gov:2586758","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2586758","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-s11-s9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s11-s9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S11-S9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.8299999833106995,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322193","display_name":"Nemzeti Kutat\u00e1si \u00e9s Technol\u00f3giai Hivatal","ror":"https://ror.org/03g2am276"},{"id":"https://openalex.org/F4320328860","display_name":"Magyarorsz\u00e1g Korm\u00e1nya","ror":"https://ror.org/007ekx298"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1982464493.pdf","grobid_xml":"https://content.openalex.org/works/W1982464493.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W55204438","https://openalex.org/W273036708","https://openalex.org/W1490960179","https://openalex.org/W1504212872","https://openalex.org/W1759313566","https://openalex.org/W1850865022","https://openalex.org/W1870686808","https://openalex.org/W2023920482","https://openalex.org/W2101891738","https://openalex.org/W2123107826","https://openalex.org/W2135932125","https://openalex.org/W2139865360","https://openalex.org/W2142786899","https://openalex.org/W2149803936","https://openalex.org/W2799321649"],"related_works":["https://openalex.org/W2059922809","https://openalex.org/W2361861616","https://openalex.org/W2353179089","https://openalex.org/W2387527986","https://openalex.org/W2479250593","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W4283261428","https://openalex.org/W2375125267","https://openalex.org/W3089032726"],"abstract_inverted_index":{"BACKGROUND:":[0],"Detecting":[1],"uncertain":[2],"and":[3,47,73,87,90,110,142,167,179,199,220],"negative":[4,86],"assertions":[5],"is":[6,19,174,180,209],"essential":[7],"in":[8,15,49],"most":[9],"BioMedical":[10],"Text":[11],"Mining":[12],"tasks":[13],"where,":[14],"general,":[16],"the":[17,56,82,92,118,125,168,186,196,207,215],"aim":[18],"to":[20],"derive":[21],"factual":[22],"knowledge":[23],"from":[24,185],"textual":[25],"data.":[26],"This":[27],"article":[28],"reports":[29],"on":[30,44,162],"a":[31,38,111,192,211],"corpus":[32,55,61,130,163,173,208],"annotation":[33,100,119,141,153],"project":[34],"that":[35,137],"has":[36],"produced":[37],"freely":[39],"available":[40],"resource":[41,194,213],"for":[42,85,95,115,140,176,195,214],"research":[43],"handling":[45],"negation":[46,155],"uncertainty":[48],"biomedical":[50,202],"texts":[51],"(we":[52],"call":[53],"this":[54],"BioScope":[57],"corpus).":[58],"RESULTS:":[59],"The":[60,77,99,128,172],"consists":[62,131],"of":[63,132,145,170,182,189,201,218],"three":[64],"parts,":[65],"namely":[66],"medical":[67],"free":[68,181],"texts,":[69],"biological":[70,74],"full":[71],"papers":[72],"scientific":[75,219],"abstracts.":[76],"dataset":[78],"contains":[79],"annotations":[80],"at":[81,91],"token":[83],"level":[84,94],"speculative":[88],"keywords":[89],"sentence":[93],"their":[96],"linguistic":[97,152,216],"scope.":[98],"process":[101],"was":[102],"carried":[103],"out":[104],"by":[105],"two":[106],"independent":[107],"linguist":[108],"annotators":[109,126],"chief":[112],"linguist--also":[113],"responsible":[114],"setting":[116],"up":[117],"guidelines":[120],"--who":[121],"resolved":[122],"cases":[123],"where":[124],"disagreed.":[127],"resulting":[129],"more":[133],"than":[134],"20.000":[135],"sentences":[136],"were":[138],"considered":[139],"over":[143],"10%":[144],"them":[146],"actually":[147],"contain":[148],"one":[149],"(or":[150],"more)":[151],"suggesting":[154],"or":[156],"uncertainty.":[157],"CONCLUSION:":[158],"Statistics":[159],"are":[160],"reported":[161],"size,":[164],"ambiguity":[165],"levels":[166],"consistency":[169],"annotations.":[171],"accessible":[175],"academic":[177],"purposes":[178],"charge.":[183],"Apart":[184],"intended":[187],"goal":[188],"serving":[190],"as":[191],"common":[193],"training,":[197],"testing":[198],"comparing":[200],"Natural":[203],"Language":[204],"Processing":[205],"systems,":[206],"also":[210],"good":[212],"analysis":[217],"clinical":[221],"texts.":[222]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":32},{"year":2020,"cited_by_count":28},{"year":2019,"cited_by_count":37},{"year":2018,"cited_by_count":26},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":20},{"year":2015,"cited_by_count":32},{"year":2014,"cited_by_count":33},{"year":2013,"cited_by_count":24},{"year":2012,"cited_by_count":38}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
