{"id":"https://openalex.org/W1981352196","doi":"https://doi.org/10.1186/1471-2105-9-s1-s6","title":"GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations","display_name":"GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations","publication_year":2008,"publication_date":"2008-02-01","ids":{"openalex":"https://openalex.org/W1981352196","doi":"https://doi.org/10.1186/1471-2105-9-s1-s6","mag":"1981352196","pmid":"https://pubmed.ncbi.nlm.nih.gov/18315859"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-s1-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100932078","display_name":"Qingwei Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210123940","display_name":"Ministry of Education","ror":"https://ror.org/02xv42m49","country_code":"PT","type":"government","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210123940"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN","PT"],"is_corresponding":false,"raw_author_name":"Qingwei Xu","raw_affiliation_strings":["The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan 430074, China. xuqingwei@sina.com.cn","The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan 430074, China. xuqingwei@sina.com.cn","institution_ids":["https://openalex.org/I4210123940"]},{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113757175","display_name":"Yi\u2010Xiang Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yixiang Shi","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200031, China","Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200031, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111935848","display_name":"Qiang L\u00fc","orcid":null},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiang Lu","raw_affiliation_strings":["The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, 430074, China","The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, 430074, China","institution_ids":["https://openalex.org/I1327237609"]},{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100419052","display_name":"Guoqing Zhang","orcid":"https://orcid.org/0000-0001-8827-7546"},"institutions":[{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoqing Zhang","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","Shanghai Center for Bioinformation Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056033605","display_name":"Qingming Luo","orcid":null},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qingming Luo","raw_affiliation_strings":["The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, 430074, China","The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, 430074, China","institution_ids":["https://openalex.org/I1327237609"]},{"raw_affiliation_string":"The Key Laboratory of Biomedical Photonics of the Ministry of Education, HUST, Wuhan, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008280608","display_name":"Yixue Li","orcid":"https://orcid.org/0000-0002-1198-7176"},"institutions":[{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yixue Li","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","Shanghai Center for Bioinformation Technology, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, Shanghai, 200235, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5008280608","https://openalex.org/A5056033605"],"corresponding_institution_ids":["https://openalex.org/I1327237609","https://openalex.org/I4210162648","https://openalex.org/I47720641"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.7021,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.69173314,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"9","issue":"S1","first_page":"S6","last_page":"S6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.6004999876022339,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.6004999876022339,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.328900009393692,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.03460000082850456,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8323142528533936},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.7804650068283081},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6933062672615051},{"id":"https://openalex.org/keywords/sparql","display_name":"SPARQL","score":0.6496973037719727},{"id":"https://openalex.org/keywords/rdf/xml","display_name":"RDF/XML","score":0.575111985206604},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5647275447845459},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5316978693008423},{"id":"https://openalex.org/keywords/rdf-schema","display_name":"RDF Schema","score":0.5119541883468628},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.39724746346473694},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15059056878089905}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8323142528533936},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.7804650068283081},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6933062672615051},{"id":"https://openalex.org/C41009113","wikidata":"https://www.wikidata.org/wiki/Q54871","display_name":"SPARQL","level":4,"score":0.6496973037719727},{"id":"https://openalex.org/C78923513","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"RDF/XML","level":5,"score":0.575111985206604},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5647275447845459},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5316978693008423},{"id":"https://openalex.org/C15657843","wikidata":"https://www.wikidata.org/wiki/Q1751819","display_name":"RDF Schema","level":5,"score":0.5119541883468628},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.39724746346473694},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15059056878089905},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-9-s1-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18315859","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18315859","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2259407","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2259407","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-s1-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1981352196.pdf","grobid_xml":"https://content.openalex.org/works/W1981352196.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W29172951","https://openalex.org/W387168707","https://openalex.org/W1504439773","https://openalex.org/W1527927437","https://openalex.org/W1748928863","https://openalex.org/W1996599952","https://openalex.org/W2004499212","https://openalex.org/W2009000548","https://openalex.org/W2020694521","https://openalex.org/W2024938717","https://openalex.org/W2025709892","https://openalex.org/W2032951307","https://openalex.org/W2041428546","https://openalex.org/W2042377056","https://openalex.org/W2045089599","https://openalex.org/W2063007776","https://openalex.org/W2088561970","https://openalex.org/W2096704019","https://openalex.org/W2098780184","https://openalex.org/W2106928637","https://openalex.org/W2111903862","https://openalex.org/W2114296069","https://openalex.org/W2120337732","https://openalex.org/W2123171788","https://openalex.org/W2127789342","https://openalex.org/W2134418889","https://openalex.org/W2134868174","https://openalex.org/W2141652419","https://openalex.org/W2144303444","https://openalex.org/W2148572968","https://openalex.org/W2163040665","https://openalex.org/W2165428180","https://openalex.org/W2168649863","https://openalex.org/W2290620050","https://openalex.org/W3154566661","https://openalex.org/W4231824804","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4206665951","https://openalex.org/W4301152651","https://openalex.org/W3107051279","https://openalex.org/W2602535883","https://openalex.org/W3082761338","https://openalex.org/W3171256892","https://openalex.org/W2563388676","https://openalex.org/W2982984597","https://openalex.org/W4299066751","https://openalex.org/W4243630814"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,72],"most":[2],"renowned":[3],"biological":[4],"ontology,":[5],"Gene":[6],"Ontology":[7],"(GO)":[8],"is":[9,85,179,188,222,230],"widely":[10],"used":[11],"for":[12],"annotations":[13,97],"of":[14,19,41,47,75,107,137,165,177,210,216],"genes":[15],"and":[16,65,79,133,155,204,213,218,229],"gene":[17],"products":[18],"different":[20],"organisms.":[21],"However,":[22],"there":[23],"are":[24],"shortcomings":[25],"in":[26,87,121,185],"the":[27,36,51,58,80,143,150,156,163,175,233],"Resource":[28],"Description":[29],"Framework":[30],"(RDF)":[31],"data":[32,78,120,153],"file":[33],"provided":[34],"by":[35],"GO":[37,54,76,96,131,217],"consortium:":[38],"1)":[39],"Lack":[40],"sufficient":[42],"semantic":[43,63,186,201,211],"relationships":[44],"between":[45,130],"pairs":[46],"terms":[48],"coming":[49],"from":[50],"three":[52],"independent":[53],"sub-ontologies,":[55],"that":[56,82],"limit":[57],"power":[59],"to":[60,94,160,198,206],"provide":[61,207],"complex":[62],"queries":[64,167],"inference":[66,138,187,214],"services":[67],"based":[68,98],"on":[69,99],"it.":[70],"2)":[71],"term-centric":[73],"view":[74],"annotation":[77],"fact":[81],"all":[83],"information":[84,181],"stored":[86],"a":[88,112,122,135,173,208],"single":[89],"file.":[90],"This":[91],"makes":[92],"attempts":[93],"retrieve":[95],"big":[100],"volume":[101],"datasets":[102],"unmanageable.":[103],"3)":[104],"No":[105],"support":[106],"GOSlim.":[108],"RESULTS:":[109],"We":[110],"propose":[111],"RDF":[113,124,152,166],"model,":[114],"GORouter,":[115],"which":[116],"encodes":[117],"heterogeneous":[118],"original":[119],"uniform":[123],"format,":[125],"creates":[126],"additional":[127],"ontology":[128],"mappings":[129],"terms,":[132],"introduces":[134],"set":[136],"rulebases.":[139],"Furthermore,":[140],"we":[141],"use":[142,199],"Oracle":[144],"Network":[145],"Data":[146],"Model":[147],"(NDM)":[148],"as":[149],"native":[151],"repository":[154],"table":[157],"function":[158],"RDF_MATCH":[159],"seamlessly":[161],"combine":[162],"result":[164],"with":[168],"traditional":[169],"relational":[170,191],"data.":[171],"As":[172],"result,":[174],"scale":[176],"GORouter":[178,221],"minimized;":[180],"not":[182],"directly":[183],"involved":[184],"put":[189],"into":[190],"tables.":[192],"CONCLUSION:":[193],"Our":[194],"work":[195],"demonstrates":[196],"how":[197],"multiple":[200],"web":[202],"tools":[203],"techniques":[205],"mixture":[209],"query":[212],"solutions":[215],"its":[219],"associations.":[220],"licensed":[223],"under":[224],"Apache":[225],"License":[226],"Version":[227],"2.0,":[228],"accessible":[231],"via":[232],"website:":[234],"http://www.scbit.org/gorouter/.":[235]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
