{"id":"https://openalex.org/W2096374069","doi":"https://doi.org/10.1186/1471-2105-9-s1-s5","title":"Towards ontology-driven navigation of the lipid bibliosphere","display_name":"Towards ontology-driven navigation of the lipid bibliosphere","publication_year":2008,"publication_date":"2008-02-01","ids":{"openalex":"https://openalex.org/W2096374069","doi":"https://doi.org/10.1186/1471-2105-9-s1-s5","mag":"2096374069","pmid":"https://pubmed.ncbi.nlm.nih.gov/18315858"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-s1-s5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080598287","display_name":"Christopher J. O. Baker","orcid":"https://orcid.org/0000-0003-4004-6479"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Christopher JO Baker","raw_affiliation_strings":["Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, Singapore 119613. cbaker@i2r.a-star.edu.sg","Department of Data Mining, Institute for Infocomm Research, , Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, Singapore 119613. cbaker@i2r.a-star.edu.sg","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, , Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087137735","display_name":"Rajaraman Kanagasabai","orcid":"https://orcid.org/0000-0001-6177-9570"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Rajaraman Kanagasabai","raw_affiliation_strings":["Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","Department of Data Mining, Institute for Infocomm Research, , Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, , Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000973961","display_name":"Wee Tiong Ang","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Wee Tiong Ang","raw_affiliation_strings":["Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","Department of Data Mining, Institute for Infocomm Research, , Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, , Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088939411","display_name":"Anitha Veeramani","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Anitha Veeramani","raw_affiliation_strings":["Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","Department of Data Mining, Institute for Infocomm Research, , Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Department of Data Mining, Institute for Infocomm Research, , Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073889995","display_name":"Hong-Sang Low","orcid":"https://orcid.org/0009-0007-3531-1406"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hong-Sang Low","raw_affiliation_strings":["Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, 119260, Singapore","Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, 119260, Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076808018","display_name":"Markus R. Wenk","orcid":"https://orcid.org/0000-0001-5447-7881"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Markus R Wenk","raw_affiliation_strings":["Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, 119260, Singapore","Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, 119260, Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"Department of Biochemistry and Department of Biological Sciences, Centre for Life Sciences, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5080598287"],"corresponding_institution_ids":["https://openalex.org/I3005327000"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":3.7173,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.93811135,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"9","issue":"S1","first_page":"S5","last_page":"S5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9711999893188477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9711999893188477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.011599999852478504,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.0017999999690800905,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7285431027412415},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7242617607116699},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4887123107910156},{"id":"https://openalex.org/keywords/lipidomics","display_name":"Lipidomics","score":0.4645186960697174},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.46373167634010315},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4635647237300873},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.45795711874961853},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.41254496574401855},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3769478499889374},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21306359767913818},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.20921429991722107}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7285431027412415},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7242617607116699},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4887123107910156},{"id":"https://openalex.org/C58017582","wikidata":"https://www.wikidata.org/wiki/Q6556376","display_name":"Lipidomics","level":2,"score":0.4645186960697174},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.46373167634010315},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4635647237300873},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.45795711874961853},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.41254496574401855},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3769478499889374},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21306359767913818},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.20921429991722107},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008659","descriptor_name":"Metabolic Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-9-s1-s5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18315858","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18315858","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2259406","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2259406","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/28680","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/28680","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-s1-s5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-s1-s5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-S1-S5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.46000000834465027,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G128649251","display_name":null,"funder_award_id":"R-183-000-607-712","funder_id":"https://openalex.org/F4320320698","funder_display_name":"National University of Singapore"}],"funders":[{"id":"https://openalex.org/F4320320698","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49"},{"id":"https://openalex.org/F4320335846","display_name":"Biomedical Research Council","ror":"https://ror.org/03xy0wx88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096374069.pdf","grobid_xml":"https://content.openalex.org/works/W2096374069.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W124429741","https://openalex.org/W175755846","https://openalex.org/W306896668","https://openalex.org/W1457910469","https://openalex.org/W1510421640","https://openalex.org/W1510720609","https://openalex.org/W1559519274","https://openalex.org/W1646048262","https://openalex.org/W1670748022","https://openalex.org/W1793807384","https://openalex.org/W1975783279","https://openalex.org/W2053673723","https://openalex.org/W2091978351","https://openalex.org/W2096525273","https://openalex.org/W2096769282","https://openalex.org/W2103260426","https://openalex.org/W2115200041","https://openalex.org/W2127031535","https://openalex.org/W2127479124","https://openalex.org/W2132784310","https://openalex.org/W2142237411","https://openalex.org/W2148853951","https://openalex.org/W2159628188","https://openalex.org/W4230903726","https://openalex.org/W4235110862"],"related_works":["https://openalex.org/W2044379223","https://openalex.org/W4245710446","https://openalex.org/W3140834074","https://openalex.org/W2087742606","https://openalex.org/W2353606007","https://openalex.org/W2393185060","https://openalex.org/W4236567086","https://openalex.org/W1988809668","https://openalex.org/W2354746078","https://openalex.org/W302910452"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,36,253,293],"indexing":[2],"of":[3,38,66,76,86,138,150,158,234,244,255,259,285,301],"scientific":[4,77,251],"literature":[5,210],"and":[6,11,33,42,94,105,116,141,180,199,212,240,265],"content":[7],"is":[8,269],"a":[9,28,51,99,171,204,241],"relevant":[10],"contemporary":[12],"requirement":[13],"within":[14],"life":[15],"science":[16],"information":[17,20,198],"systems.":[18],"Navigating":[19],"available":[21],"in":[22,31,132,147,193,271,298],"legacy":[23],"formats":[24],"continues":[25],"to":[26,56,73,83,122,175,189,229,249,282],"be":[27],"challenge":[29,223],"both":[30],"enterprise":[32],"academic":[34],"domains.":[35],"emergence":[37],"semantic":[39],"web":[40],"technologies":[41],"their":[43],"fusion":[44],"with":[45,54,231,278],"artificial":[46],"intelligence":[47],"techniques":[48],"has":[49],"provided":[50,165],"new":[52],"toolkit":[53],"which":[55,119,194],"address":[57],"these":[58],"data":[59],"integration":[60],"challenges.":[61],"In":[62],"the":[63,74,84,129,136,139,148,151,156,159,167,187,191,209,232,256,260,275,283,291,299],"emerging":[64],"field":[65],"lipidomics":[67,225],"such":[68,88],"navigation":[69,149,214],"challenges":[70,131],"are":[71,120],"barriers":[72],"translation":[75],"results":[78,284],"into":[79,290],"actionable":[80],"knowledge,":[81],"critical":[82],"treatment":[85],"diseases":[87],"as":[89,144],"Alzheimer's":[90],"syndrome,":[91],"Mycobacterium":[92],"infections":[93],"cancer.":[95],"RESULTS:":[96],"We":[97,127,154],"present":[98],"literature-driven":[100],"workflow":[101],"involving":[102],"document":[103],"delivery":[104],"natural":[106],"language":[107],"processing":[108],"steps":[109],"generating":[110],"tagged":[111],"sentences":[112,177],"containing":[113],"lipid,":[114],"protein":[115],"disease":[117],"names,":[118],"instantiated":[121,168,289],"custom":[123],"designed":[124],"lipid":[125,134,152,276],"ontology.":[126,292],"describe":[128],"design":[130],"capturing":[133],"nomenclature,":[135],"mandate":[137],"ontology":[140,169],"its":[142],"role":[143],"query":[145,163,173,176,280,295],"model":[146],"bibliosphere.":[153],"illustrate":[155,203],"extent":[157],"description":[160,266],"logic-based":[161],"A-box":[162],"capability":[164],"by":[166],"using":[170],"graphical":[172],"composer":[174],"describing":[178],"lipid-protein":[179],"lipid-disease":[181],"correlations.":[182],"CONCLUSION:":[183],"As":[184],"scientists":[185],"accept":[186],"need":[188],"readjust":[190],"manner":[192],"we":[195,202,217],"search":[196],"for":[197,224],"derive":[200,250],"knowledge":[201,213],"system":[205],"that":[206],"can":[207],"constrain":[208],"explosion":[211],"problems.":[215],"Specifically":[216],"have":[218,228],"focussed":[219],"on":[220],"solving":[221],"this":[222,272,302],"researchers":[226],"who":[227],"deal":[230],"lack":[233],"standardized":[235],"vocabulary,":[236],"differing":[237],"classification":[238],"schemes,":[239],"wide":[242],"array":[243],"synonyms":[245],"before":[246],"being":[247],"able":[248],"insights.":[252],"use":[254],"OWL-DL":[257],"variant":[258],"Web":[261],"Ontology":[262],"Language":[263],"(OWL)":[264],"logic":[267],"reasoning":[268],"pivotal":[270],"regard,":[273],"providing":[274],"scientist":[277],"advanced":[279],"access":[281],"text":[286],"mining":[287],"algorithms":[288],"visual":[294],"paradigm":[296],"assists":[297],"adoption":[300],"technology.":[303]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2012,"cited_by_count":4}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
