{"id":"https://openalex.org/W2049966951","doi":"https://doi.org/10.1186/1471-2105-9-70","title":"GraphCrunch: A tool for large network analyses","display_name":"GraphCrunch: A tool for large network analyses","publication_year":2008,"publication_date":"2008-01-30","ids":{"openalex":"https://openalex.org/W2049966951","doi":"https://doi.org/10.1186/1471-2105-9-70","mag":"2049966951","pmid":"https://pubmed.ncbi.nlm.nih.gov/18230190"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-70","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042457126","display_name":"Tijana Milenkovi\u0107","orcid":"https://orcid.org/0000-0002-8023-6907"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Tijana Milenkovi\u0107","raw_affiliation_strings":["Department of Computer Science, University of California, Irvine, CA 92697-3435, USA. tmilenko@ics.uci.edu","Department of Computer Science, University of California, Irvine, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, CA 92697-3435, USA. tmilenko@ics.uci.edu","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, USA#TAB#","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050241247","display_name":"Jih\u2010Sheng Lai","orcid":"https://orcid.org/0000-0003-2315-8460"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason Lai","raw_affiliation_strings":["Department of Computer Science, University of California, Irvine, CA, 92697-3435, USA","Department of Computer Science, University of California, Irvine, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, CA, 92697-3435, USA","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, USA#TAB#","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069984203","display_name":"Nata\u0161a Pr\u017eulj","orcid":"https://orcid.org/0000-0002-1290-853X"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nata\u0161a Pr\u017eulj","raw_affiliation_strings":["Department of Computer Science, University of California, Irvine, CA, 92697-3435, USA","Department of Computer Science, University of California, Irvine, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, CA, 92697-3435, USA","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, USA#TAB#","institution_ids":["https://openalex.org/I204250578"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5042457126"],"corresponding_institution_ids":["https://openalex.org/I204250578"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":4.8401,"has_fulltext":true,"cited_by_count":114,"citation_normalized_percentile":{"value":0.95799839,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"9","issue":"1","first_page":"70","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.6719756722450256},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6565529108047485},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.6516475677490234},{"id":"https://openalex.org/keywords/null-model","display_name":"Null model","score":0.5657870769500732},{"id":"https://openalex.org/keywords/network-analysis","display_name":"Network analysis","score":0.5608486533164978},{"id":"https://openalex.org/keywords/network-simulation","display_name":"Network simulation","score":0.5515484809875488},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5247907042503357},{"id":"https://openalex.org/keywords/network-model","display_name":"Network model","score":0.5032708048820496},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.49808359146118164},{"id":"https://openalex.org/keywords/network-science","display_name":"Network science","score":0.49182796478271484},{"id":"https://openalex.org/keywords/network-architecture","display_name":"Network architecture","score":0.45173487067222595},{"id":"https://openalex.org/keywords/network-formation","display_name":"Network formation","score":0.44606438279151917},{"id":"https://openalex.org/keywords/complex-network","display_name":"Complex network","score":0.42782270908355713},{"id":"https://openalex.org/keywords/spatial-network","display_name":"Spatial network","score":0.41655582189559937},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.2599676251411438},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16177377104759216}],"concepts":[{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.6719756722450256},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6565529108047485},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.6516475677490234},{"id":"https://openalex.org/C36382193","wikidata":"https://www.wikidata.org/wiki/Q7068966","display_name":"Null model","level":2,"score":0.5657870769500732},{"id":"https://openalex.org/C32946077","wikidata":"https://www.wikidata.org/wiki/Q618079","display_name":"Network analysis","level":2,"score":0.5608486533164978},{"id":"https://openalex.org/C139940560","wikidata":"https://www.wikidata.org/wiki/Q290036","display_name":"Network simulation","level":2,"score":0.5515484809875488},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5247907042503357},{"id":"https://openalex.org/C104122410","wikidata":"https://www.wikidata.org/wiki/Q1416406","display_name":"Network model","level":2,"score":0.5032708048820496},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.49808359146118164},{"id":"https://openalex.org/C137753397","wikidata":"https://www.wikidata.org/wiki/Q2434424","display_name":"Network science","level":3,"score":0.49182796478271484},{"id":"https://openalex.org/C193415008","wikidata":"https://www.wikidata.org/wiki/Q639681","display_name":"Network architecture","level":2,"score":0.45173487067222595},{"id":"https://openalex.org/C68416499","wikidata":"https://www.wikidata.org/wiki/Q7001033","display_name":"Network formation","level":2,"score":0.44606438279151917},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.42782270908355713},{"id":"https://openalex.org/C53471067","wikidata":"https://www.wikidata.org/wiki/Q7574076","display_name":"Spatial network","level":2,"score":0.41655582189559937},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.2599676251411438},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16177377104759216},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-9-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18230190","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18230190","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.282.5057","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.282.5057","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/1c/ce/BMC_Bioinformatics_2008_Jan_30_9_70.tar.gz","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:cd6caf289f8b464a8f1ac53ce42dcc2c","is_oa":true,"landing_page_url":"https://doaj.org/article/cd6caf289f8b464a8f1ac53ce42dcc2c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 70 (2008)","raw_type":"article"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1485287","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1485287/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   BMC BIOINFORMATICS , 9  (ARTN 70)     (2008)      ","raw_type":"Article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt865708ps","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/865708ps","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Informatics, vol 9","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2275247","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2275247","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1171700966","display_name":null,"funder_award_id":"NSF CAREER","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G1270682835","display_name":"CAREER: Tools for Analyzing, Modeling, and Comparing Protein-Protein Interaction Networks","funder_award_id":"0644424","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6671297155","display_name":null,"funder_award_id":"CAREER","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332688","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2049966951.pdf","grobid_xml":"https://content.openalex.org/works/W2049966951.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W158117962","https://openalex.org/W630423399","https://openalex.org/W1970360171","https://openalex.org/W1995907191","https://openalex.org/W2006038621","https://openalex.org/W2008620264","https://openalex.org/W2033488646","https://openalex.org/W2036265926","https://openalex.org/W2037433020","https://openalex.org/W2044881936","https://openalex.org/W2048596679","https://openalex.org/W2101181377","https://openalex.org/W2104315543","https://openalex.org/W2104812688","https://openalex.org/W2108584774","https://openalex.org/W2110699703","https://openalex.org/W2112090702","https://openalex.org/W2112262143","https://openalex.org/W2113019448","https://openalex.org/W2113654464","https://openalex.org/W2123643026","https://openalex.org/W2124533460","https://openalex.org/W2132582966","https://openalex.org/W2137786672","https://openalex.org/W2141297641","https://openalex.org/W2141629057","https://openalex.org/W2144636447","https://openalex.org/W2148606196","https://openalex.org/W2148753315","https://openalex.org/W2148762636","https://openalex.org/W2148866736","https://openalex.org/W2153624566","https://openalex.org/W2156153879","https://openalex.org/W2172049947","https://openalex.org/W2600160877","https://openalex.org/W2898709021","https://openalex.org/W4210777595","https://openalex.org/W4236956086","https://openalex.org/W4312512934"],"related_works":["https://openalex.org/W2769051235","https://openalex.org/W2950946391","https://openalex.org/W3101738023","https://openalex.org/W4300475702","https://openalex.org/W2355420335","https://openalex.org/W1644946422","https://openalex.org/W2410638672","https://openalex.org/W2025416535","https://openalex.org/W2051848047","https://openalex.org/W2135322159"],"abstract_inverted_index":{"GraphCrunch":[0,40],"is":[1,59,87],"a":[2,21,30,42],"software":[3,48,58],"tool":[4,49],"that":[5,86],"implements":[6],"the":[7,90],"latest":[8],"research":[9],"on":[10],"biological":[11,55],"network":[12,36],"models":[13,26],"and":[14,34,45,52,61,71],"properties:":[15],"it":[16,76],"compares":[17],"real-world":[18],"networks":[19],"against":[20],"series":[22],"of":[23,32],"random":[24],"graph":[25],"with":[27],"respect":[28],"to":[29,80],"multitude":[31],"local":[33],"global":[35],"properties.":[37],"We":[38],"present":[39],"as":[41],"comprehensive,":[43],"parallelizable,":[44],"easily":[46],"extendible":[47],"for":[50],"analyzing":[51],"modeling":[53],"large":[54],"networks.":[56],"The":[57],"open-source":[60],"freely":[62],"available":[63,88],"at":[64],"http://www.ics.uci.edu/~bio-nets/graphcrunch/.":[65],"It":[66],"runs":[67],"under":[68],"Linux,":[69],"MacOS,":[70],"Windows":[72],"Cygwin.":[73],"In":[74],"addition,":[75],"has":[77],"an":[78],"easy":[79],"use":[81],"on-line":[82],"web":[83,92],"user":[84],"interface":[85],"from":[89],"above":[91],"page.":[93]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
