{"id":"https://openalex.org/W2166373524","doi":"https://doi.org/10.1186/1471-2105-9-552","title":"GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments","display_name":"GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments","publication_year":2008,"publication_date":"2008-12-01","ids":{"openalex":"https://openalex.org/W2166373524","doi":"https://doi.org/10.1186/1471-2105-9-552","mag":"2166373524","pmid":"https://pubmed.ncbi.nlm.nih.gov/19099609"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-552","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-552","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-552","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-552","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020280119","display_name":"Andreas Keller","orcid":"https://orcid.org/0000-0002-5361-0895"},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Andreas Keller","raw_affiliation_strings":["Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany. ack@bioinf.uni-sb.de","Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany. ack@bioinf.uni-sb.de","institution_ids":["https://openalex.org/I91712215"]},{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015677497","display_name":"Christina Backes","orcid":"https://orcid.org/0000-0001-9330-9290"},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christina Backes","raw_affiliation_strings":["Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055243539","display_name":"Maher Al-Awadhi","orcid":null},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maher Al-Awadhi","raw_affiliation_strings":["Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065580186","display_name":"Andreas Gerasch","orcid":null},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Gerasch","raw_affiliation_strings":["Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078561274","display_name":"Jan K\u00fcntzer","orcid":null},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jan K\u00fcntzer","raw_affiliation_strings":["Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053621010","display_name":"Oliver Kohlbacher","orcid":"https://orcid.org/0000-0003-1739-4598"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Kohlbacher","raw_affiliation_strings":["Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103045561","display_name":"Michael Kaufmann","orcid":"https://orcid.org/0000-0001-9186-3538"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Kaufmann","raw_affiliation_strings":["Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wilhelm Schickard Institute for Computer Science, Eberhard Karls University, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085594740","display_name":"Hans\u2010Peter Lenhof","orcid":"https://orcid.org/0000-0002-5820-9961"},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hans-Peter Lenhof","raw_affiliation_strings":["Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Saarland University, Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I91712215"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5020280119"],"corresponding_institution_ids":["https://openalex.org/I91712215"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.5239,"has_fulltext":true,"cited_by_count":81,"citation_normalized_percentile":{"value":0.89629927,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"9","issue":"1","first_page":"552","last_page":"552"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4343000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4343000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.4115000069141388,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.03009999915957451,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7491534948348999},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6221556067466736},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5992739796638489},{"id":"https://openalex.org/keywords/toolbox","display_name":"Toolbox","score":0.5904547572135925},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5032803416252136},{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.4670039415359497},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.46573343873023987},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.46234479546546936},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.44685086607933044},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.4445191025733948},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.41540732979774475},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4118445813655853},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2591584324836731},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2306746244430542},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.19799718260765076},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1317083239555359},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10700514912605286},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09381914138793945}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7491534948348999},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6221556067466736},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5992739796638489},{"id":"https://openalex.org/C2777655017","wikidata":"https://www.wikidata.org/wiki/Q1501161","display_name":"Toolbox","level":2,"score":0.5904547572135925},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5032803416252136},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.4670039415359497},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.46573343873023987},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.46234479546546936},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.44685086607933044},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.4445191025733948},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.41540732979774475},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4118445813655853},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2591584324836731},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2306746244430542},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.19799718260765076},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1317083239555359},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10700514912605286},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09381914138793945},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-9-552","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-552","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-552","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19099609","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19099609","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:bf4796a492304fa8bf3648df4c8a438a","is_oa":true,"landing_page_url":"https://doaj.org/article/bf4796a492304fa8bf3648df4c8a438a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 552 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2627893","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2627893","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-552","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-552","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-552","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/8","score":0.6000000238418579,"display_name":"Decent work and economic growth"}],"awards":[{"id":"https://openalex.org/G4777761225","display_name":null,"funder_award_id":"SPP 1335","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2166373524.pdf","grobid_xml":"https://content.openalex.org/works/W2166373524.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1578104218","https://openalex.org/W1668625893","https://openalex.org/W1904002545","https://openalex.org/W1980548655","https://openalex.org/W1987400169","https://openalex.org/W1997921822","https://openalex.org/W2002107667","https://openalex.org/W2020541351","https://openalex.org/W2086475944","https://openalex.org/W2099396594","https://openalex.org/W2102992354","https://openalex.org/W2103017472","https://openalex.org/W2103209361","https://openalex.org/W2114533060","https://openalex.org/W2120568877","https://openalex.org/W2121458836","https://openalex.org/W2124388496","https://openalex.org/W2134582937","https://openalex.org/W2134889157","https://openalex.org/W2135207763","https://openalex.org/W2141703917","https://openalex.org/W2145889895","https://openalex.org/W2152785128","https://openalex.org/W2154021172","https://openalex.org/W2159675211","https://openalex.org/W2159751674","https://openalex.org/W2171030481","https://openalex.org/W2603612176"],"related_works":["https://openalex.org/W2068663075","https://openalex.org/W2978678743","https://openalex.org/W2797837731","https://openalex.org/W2150344375","https://openalex.org/W829257147","https://openalex.org/W3081389670","https://openalex.org/W4385302116","https://openalex.org/W2037832934","https://openalex.org/W1484449898","https://openalex.org/W2889493020"],"abstract_inverted_index":{"BACKGROUND:":[0],"High-throughput":[1],"methods":[2,45,135],"that":[3,46,113],"allow":[4],"for":[5,20,77,98,117,136],"measuring":[6],"the":[7,25,28,35,38,48,59,88,103,121,154,158,176,179,184,188],"expression":[8,64,82,169,180],"of":[9,11,27,34,50,63,75,92,102,120,141,175,192],"thousands":[10],"genes":[12],"or":[13,80],"proteins":[14],"simultaneously":[15],"have":[16],"opened":[17],"new":[18],"avenues":[19],"studying":[21,137],"biochemical":[22,193],"processes.":[23],"While":[24,72],"noisiness":[26],"data":[29,65],"necessitates":[30],"an":[31,147],"extensive":[32],"pre-processing":[33],"raw":[36],"data,":[37],"high":[39],"dimensionality":[40],"requires":[41],"effective":[42],"statistical":[43,133],"analysis":[44,134,189],"facilitate":[47],"identification":[49],"crucial":[51],"biological":[52,142,160],"features":[53],"and":[54,61,144,178,190],"relations.":[55],"For":[56],"these":[57,93],"reasons,":[58],"evaluation":[60,104,122],"interpretation":[62,191],"is":[66],"a":[67,73,110,138],"complex,":[68],"labor-intensive":[69],"multi-step":[70],"process.":[71],"variety":[74,140],"tools":[76,94],"normalizing,":[78],"analysing,":[79],"visualizing":[81],"profiles":[83],"has":[84],"been":[85],"developed":[86],"in":[87],"last":[89],"years,":[90],"most":[91],"offer":[95],"only":[96],"functionality":[97,116],"accomplishing":[99],"certain":[100],"steps":[101,119],"pipeline.":[105,123],"RESULTS:":[106],"Here,":[107],"we":[108],"present":[109],"web-based":[111],"toolbox":[112,170],"provides":[114],"rich":[115],"all":[118],"Our":[124,167],"tool":[125],"GeneTrailExpress":[126],"offers":[127],"besides":[128],"standard":[129],"normalization":[130],"procedures":[131],"powerful":[132],"large":[139],"categories":[143],"pathways.":[145],"Furthermore,":[146],"integrated":[148],"graph":[149],"visualization":[150,174],"tool,":[151],"BiNA,":[152],"enables":[153],"user":[155],"to":[156],"draw":[157],"relevant":[159],"pathways":[161,177,194],"applying":[162],"cutting-edge":[163],"graph-layout":[164],"algorithms.":[165],"CONCLUSION:":[166],"gene":[168],"with":[171],"its":[172],"interactive":[173],"values":[181],"projected":[182],"onto":[183],"nodes":[185],"will":[186],"simplify":[187],"considerably.":[195]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":15},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":10}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}