{"id":"https://openalex.org/W2101222094","doi":"https://doi.org/10.1186/1471-2105-9-415","title":"BATS: a Bayesian user-friendly software for Analyzing Time Series microarray experiments","display_name":"BATS: a Bayesian user-friendly software for Analyzing Time Series microarray experiments","publication_year":2008,"publication_date":"2008-10-06","ids":{"openalex":"https://openalex.org/W2101222094","doi":"https://doi.org/10.1186/1471-2105-9-415","mag":"2101222094","pmid":"https://pubmed.ncbi.nlm.nih.gov/18837969"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-415","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-415","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-415","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-415","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001046703","display_name":"Claudia Angelini","orcid":"https://orcid.org/0000-0001-8350-8464"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Claudia Angelini","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo, Mauro Picone, CNR-Napoli, Italy. c.angelini@iac.cnr.it","Istituto per le Applicazioni del Calcolo, 'Mauro Picone', CNR-Napoli, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo, Mauro Picone, CNR-Napoli, Italy. c.angelini@iac.cnr.it","institution_ids":["https://openalex.org/I4210106125"]},{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo, 'Mauro Picone', CNR-Napoli, Italy","institution_ids":["https://openalex.org/I4210106125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060810496","display_name":"Luisa Cutillo","orcid":"https://orcid.org/0000-0002-2205-0338"},"institutions":[{"id":"https://openalex.org/I4210152213","display_name":"Telethon Institute Of Genetics And Medicine","ror":"https://ror.org/04xfdsg27","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152213","https://openalex.org/I4210154366"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luisa Cutillo","raw_affiliation_strings":["Telethon Institute of Genetics and Medicine, Napoli, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Telethon Institute of Genetics and Medicine, Napoli, Italy","institution_ids":["https://openalex.org/I4210152213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087347634","display_name":"Daniela De Canditiis","orcid":"https://orcid.org/0000-0002-3022-3411"},"institutions":[{"id":"https://openalex.org/I4210106125","display_name":"Istituto per le Applicazioni del Calcolo Mauro Picone","ror":"https://ror.org/00ygy3d85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210106125","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Daniela De Canditiis","raw_affiliation_strings":["Istituto per le Applicazioni del Calcolo, 'Mauro Picone', CNR-Roma, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto per le Applicazioni del Calcolo, 'Mauro Picone', CNR-Roma, Italy","institution_ids":["https://openalex.org/I4210106125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010286920","display_name":"Margherita Mutarelli","orcid":"https://orcid.org/0000-0002-2168-5059"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Margherita Mutarelli","raw_affiliation_strings":["Dipartimento di Patologia generale, Seconda Universit\u00e0 di Napoli, Italy","Dipartimento di Patologia generale, Seconda Universit\u00e0 di Napoli"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Patologia generale, Seconda Universit\u00e0 di Napoli, Italy","institution_ids":[]},{"raw_affiliation_string":"Dipartimento di Patologia generale, Seconda Universit\u00e0 di Napoli","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074186297","display_name":"Marianna Pensky","orcid":"https://orcid.org/0000-0002-0011-2075"},"institutions":[{"id":"https://openalex.org/I106165777","display_name":"University of Central Florida","ror":"https://ror.org/036nfer12","country_code":"US","type":"education","lineage":["https://openalex.org/I106165777"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marianna Pensky","raw_affiliation_strings":["Department of Mathematics, University of Central Florida, USA","[Department of Mathematics, University of Central Florida, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Central Florida, USA","institution_ids":["https://openalex.org/I106165777"]},{"raw_affiliation_string":"[Department of Mathematics, University of Central Florida, USA]","institution_ids":["https://openalex.org/I106165777"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5001046703"],"corresponding_institution_ids":["https://openalex.org/I4210106125"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.8081,"has_fulltext":true,"cited_by_count":58,"citation_normalized_percentile":{"value":0.90720313,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"9","issue":"1","first_page":"415","last_page":"415"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.958899974822998,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.958899974822998,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.015200000256299973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6978206634521484},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6832543611526489},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.5848061442375183},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5575818419456482},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.551529586315155},{"id":"https://openalex.org/keywords/user-friendly","display_name":"User Friendly","score":0.5264953970909119},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5135564804077148},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.45710429549217224},{"id":"https://openalex.org/keywords/gene-chip-analysis","display_name":"Gene chip analysis","score":0.42369601130485535},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.41975873708724976},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.368394136428833},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2340547740459442},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18152251839637756},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.14008307456970215},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1308993697166443},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08611634373664856}],"concepts":[{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6978206634521484},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6832543611526489},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.5848061442375183},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5575818419456482},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.551529586315155},{"id":"https://openalex.org/C61437842","wikidata":"https://www.wikidata.org/wiki/Q281291","display_name":"User Friendly","level":2,"score":0.5264953970909119},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5135564804077148},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.45710429549217224},{"id":"https://openalex.org/C24361400","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Gene chip analysis","level":5,"score":0.42369601130485535},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.41975873708724976},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.368394136428833},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2340547740459442},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18152251839637756},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.14008307456970215},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1308993697166443},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08611634373664856},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-9-415","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-415","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-415","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18837969","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18837969","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:stars.library.ucf.edu:facultybib2000-1073","is_oa":true,"landing_page_url":"https://stars.library.ucf.edu/facultybib2000/74","pdf_url":null,"source":{"id":"https://openalex.org/S4210172555","display_name":"Journal of International Crisis and Risk Communication Research","issn_l":"2576-0017","issn":["2576-0017","2576-0025"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Bibliography 2000s","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.98.9515","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.98.9515","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.na.iac.cnr.it/rapporti/2007/RT331_07.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:4c557af313c94fb9bc8262a729e8a1af","is_oa":true,"landing_page_url":"https://doaj.org/article/4c557af313c94fb9bc8262a729e8a1af","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 415 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2579305","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2579305","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:ricerca.uniparthenope.it:11367/15660","is_oa":false,"landing_page_url":"http://hdl.handle.net/11367/15660","pdf_url":null,"source":{"id":"https://openalex.org/S4377196432","display_name":"CINECA IRIS Institutial research information system (Parthenope University of Naples)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183638586","host_organization_name":"Parthenope University of Naples","host_organization_lineage":["https://openalex.org/I183638586"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-415","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-415","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-415","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2931454705","display_name":"Activity-Dependent Regulation of Early Stages in Synapse Formation","funder_award_id":"0652524","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3544785054","display_name":"Collaborative Research: Analysis of Functional and High-Dimensional Data  with Applications","funder_award_id":"0505133","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5755280438","display_name":null,"funder_award_id":"DMS-0652524","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309590","display_name":"Universit\u00e0 degli Studi di Napoli Federico II","ror":"https://ror.org/05290cv24"},{"id":"https://openalex.org/F4320322523","display_name":"Seconda Universit\u00e0 degli Studi di Napoli","ror":"https://ror.org/02kqnpp86"},{"id":"https://openalex.org/F4320323054","display_name":"Associazione Italiana per la Ricerca sul Cancro","ror":"https://ror.org/02g2x7380"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2101222094.pdf","grobid_xml":"https://content.openalex.org/works/W2101222094.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W70906395","https://openalex.org/W1528177290","https://openalex.org/W1533335653","https://openalex.org/W1546952499","https://openalex.org/W1925571297","https://openalex.org/W1970390603","https://openalex.org/W2005302168","https://openalex.org/W2019171859","https://openalex.org/W2045775570","https://openalex.org/W2064533818","https://openalex.org/W2093017030","https://openalex.org/W2100668965","https://openalex.org/W2101114008","https://openalex.org/W2105559737","https://openalex.org/W2108675631","https://openalex.org/W2109521384","https://openalex.org/W2110065044","https://openalex.org/W2120169559","https://openalex.org/W2140703956","https://openalex.org/W2146842127","https://openalex.org/W2149566602","https://openalex.org/W2155592813","https://openalex.org/W2157795344","https://openalex.org/W2161175828","https://openalex.org/W2167194270","https://openalex.org/W2185592841","https://openalex.org/W2495204608","https://openalex.org/W2624019210","https://openalex.org/W3104024536","https://openalex.org/W3139705196","https://openalex.org/W4294107304","https://openalex.org/W6824896427"],"related_works":["https://openalex.org/W2943416042","https://openalex.org/W1544923801","https://openalex.org/W2160130936","https://openalex.org/W77579337","https://openalex.org/W2994424261","https://openalex.org/W170658859","https://openalex.org/W2086336666","https://openalex.org/W2412120523","https://openalex.org/W2490137852","https://openalex.org/W3023720143"],"abstract_inverted_index":{"BACKGROUND:":[0],"Gene":[1],"expression":[2,121,170],"levels":[3],"in":[4,85,108,194],"a":[5,22,52,56,96,109,183,200,216,238],"given":[6,23],"cell":[7],"can":[8],"be":[9],"influenced":[10],"by":[11],"different":[12,27,29],"factors,":[13],"namely":[14],"pharmacological":[15],"or":[16,55,210],"medical":[17],"treatments.":[18],"The":[19,123,138,180,232],"response":[20],"to":[21,103,114,118,158,167],"stimulus":[24],"is":[25,44,125,215],"usually":[26,82],"for":[28,130,220],"genes":[30,49,107,165],"and":[31,63,117,161,166,208,226,237],"may":[32],"depend":[33],"on":[34,127],"time.":[35],"One":[36],"of":[37,40,48,59,66,78,92,144,203,223],"the":[38,45,90,150,221,234,247],"goals":[39],"modern":[41],"molecular":[42],"biology":[43],"high-throughput":[46],"identification":[47],"associated":[50],"with":[51],"particular":[53],"treatment":[54],"biological":[57],"process":[58],"interest.":[60],"From":[61],"methodological":[62],"computational":[64],"point":[65],"view,":[67],"analyzing":[68],"high-dimensional":[69],"time":[70,176,229],"course":[71,230],"microarray":[72,112,196,228],"data":[73],"requires":[74],"very":[75,134],"specific":[76],"set":[77],"tools":[79],"which":[80,100,192],"are":[81,178,242],"not":[83],"included":[84],"standard":[86],"software":[87,139,219],"packages.":[88],"Recently,":[89],"authors":[91],"this":[93],"paper":[94],"developed":[95],"fully":[97],"Bayesian":[98],"approach":[99],"allows":[101,155],"one":[102],"identify":[104,160],"differentially":[105,163],"expressed":[106,164],"'one-sample'":[110],"time-course":[111,195],"experiment,":[113],"rank":[115,162],"them":[116],"estimate":[119,168],"their":[120,169],"profiles.":[122],"method":[124],"based":[126],"explicit":[128],"expressions":[129],"calculations":[131],"and,":[132],"hence,":[133],"computationally":[135],"efficient.":[136],"RESULTS:":[137],"package":[140,181],"BATS":[141,186,214,248],"(Bayesian":[142],"Analysis":[143],"Time":[145],"Series)":[146],"presented":[147],"here":[148],"implements":[149],"methodology":[151],"described":[152],"above.":[153],"It":[154],"an":[156],"user":[157,235],"automatically":[159],"profiles":[171],"when":[172],"at":[173,246],"least":[174],"5-6":[175],"points":[177],"available.":[179],"has":[182],"user-friendly":[184,218],"interface.":[185],"successfully":[187],"manages":[188],"various":[189],"technical":[190],"difficulties":[191],"arise":[193],"experiments,":[197],"such":[198],"as":[199],"small":[201],"number":[202],"observations,":[204],"non-uniform":[205],"sampling":[206],"intervals":[207],"replicated":[209],"missing":[211],"data.":[212],"CONCLUSION:":[213],"free":[217],"analysis":[222],"both":[224],"simulated":[225],"real":[227],"experiments.":[231],"software,":[233],"manual":[236],"brief":[239],"illustrative":[240],"example":[241],"freely":[243],"available":[244],"online":[245],"website:":[249],"http://www.na.iac.cnr.it/bats.":[250]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":9}],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}
