{"id":"https://openalex.org/W2088366062","doi":"https://doi.org/10.1186/1471-2105-9-355","title":"NITPICK: peak identification for mass spectrometry data","display_name":"NITPICK: peak identification for mass spectrometry data","publication_year":2008,"publication_date":"2008-08-28","ids":{"openalex":"https://openalex.org/W2088366062","doi":"https://doi.org/10.1186/1471-2105-9-355","mag":"2088366062","pmid":"https://pubmed.ncbi.nlm.nih.gov/18755032"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-355","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-355","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-355","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-355","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005996110","display_name":"Bernhard Y. Renard","orcid":"https://orcid.org/0000-0003-4589-9809"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Bernhard Y Renard","raw_affiliation_strings":["Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany. bernhard.renard@iwr.uni-heidelberg.de","Department of Pathology, Children\u2019s Hospital Boston, Boston, USA","Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany. bernhard.renard@iwr.uni-heidelberg.de","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Department of Pathology, Children\u2019s Hospital Boston, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I111088046"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044068960","display_name":"Marc Kirchner","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I85384741","display_name":"Heidelberg University","ror":"https://ror.org/04rcqnp59","country_code":"US","type":"education","lineage":["https://openalex.org/I85384741"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Marc Kirchner","raw_affiliation_strings":["Department of Pathology, Children's Hospital Boston, Boston, MA, USA,","Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany,","Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany","Department of Pathology, Children\u2019s Hospital Boston, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Children's Hospital Boston, Boston, MA, USA,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany,","institution_ids":["https://openalex.org/I85384741","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Department of Pathology, Children\u2019s Hospital Boston, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000977764","display_name":"Hanno Steen","orcid":"https://orcid.org/0000-0003-0179-6648"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanno Steen","raw_affiliation_strings":["Department of Pathology, Harvard Medical School and Children's Hospital Boston, Boston, MA, USA","Department of Pathology, Harvard Medical School and Children\u2019s Hospital Boston, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Harvard Medical School and Children's Hospital Boston, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Pathology, Harvard Medical School and Children\u2019s Hospital Boston, Boston, USA","institution_ids":["https://openalex.org/I1288882113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064036628","display_name":"Judith A. Steen","orcid":"https://orcid.org/0000-0002-8167-0772"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Judith AJ Steen","raw_affiliation_strings":["Department of Neurobiology, Harvard Medical School and Department of Neurology, Children's Hospital Boston, Boston, MA, USA","Department of Neurobiology, Harvard Medical School and Department of Neurology, Children\u2019s Hospital Boston, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurobiology, Harvard Medical School and Department of Neurology, Children's Hospital Boston, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Neurobiology, Harvard Medical School and Department of Neurology, Children\u2019s Hospital Boston, Boston, USA","institution_ids":["https://openalex.org/I1288882113"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020048224","display_name":"Fred A. Hamprecht","orcid":"https://orcid.org/0000-0003-4148-5043"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I85384741","display_name":"Heidelberg University","ror":"https://ror.org/04rcqnp59","country_code":"US","type":"education","lineage":["https://openalex.org/I85384741"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Fred A Hamprecht","raw_affiliation_strings":["Department of Pathology, Children's Hospital Boston, Boston, MA, USA,","Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany,","Department of Pathology, Children\u2019s Hospital Boston, Boston, USA","Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Children's Hospital Boston, Boston, MA, USA,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany,","institution_ids":["https://openalex.org/I85384741","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Department of Pathology, Children\u2019s Hospital Boston, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I111088046"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing, University of Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.7362,"has_fulltext":true,"cited_by_count":74,"citation_normalized_percentile":{"value":0.93278079,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"9","issue":"1","first_page":"355","last_page":"355"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.829800009727478,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.829800009727478,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.03590000048279762,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.015699999406933784,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/deconvolution","display_name":"Deconvolution","score":0.6743671894073486},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6557697057723999},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.5536493062973022},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5076712369918823},{"id":"https://openalex.org/keywords/mass-spectrum","display_name":"Mass spectrum","score":0.4892408847808838},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.4569644331932068},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.44464248418807983},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4261009693145752},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4199255406856537},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33093810081481934},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.290347158908844},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.19235703349113464},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.16900503635406494},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.14777565002441406},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09277275204658508}],"concepts":[{"id":"https://openalex.org/C174576160","wikidata":"https://www.wikidata.org/wiki/Q1183700","display_name":"Deconvolution","level":2,"score":0.6743671894073486},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6557697057723999},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.5536493062973022},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5076712369918823},{"id":"https://openalex.org/C40325409","wikidata":"https://www.wikidata.org/wiki/Q2360668","display_name":"Mass spectrum","level":3,"score":0.4892408847808838},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.4569644331932068},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.44464248418807983},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4261009693145752},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4199255406856537},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33093810081481934},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.290347158908844},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.19235703349113464},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.16900503635406494},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.14777565002441406},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09277275204658508},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-9-355","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-355","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-355","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18755032","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18755032","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:b292faae51714a8f92259396e5021bbf","is_oa":true,"landing_page_url":"https://doaj.org/article/b292faae51714a8f92259396e5021bbf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 355 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2655099","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2655099","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-355","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-355","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-355","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320320881","display_name":"Universit\u00e4t Heidelberg","ror":"https://ror.org/038t36y30"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2088366062.pdf","grobid_xml":"https://content.openalex.org/works/W2088366062.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W1480376833","https://openalex.org/W1519955500","https://openalex.org/W1554944419","https://openalex.org/W1965366579","https://openalex.org/W1969213091","https://openalex.org/W1978769064","https://openalex.org/W1984914164","https://openalex.org/W1995454576","https://openalex.org/W1995691260","https://openalex.org/W1999058847","https://openalex.org/W2001007352","https://openalex.org/W2001841288","https://openalex.org/W2003144438","https://openalex.org/W2005726857","https://openalex.org/W2018864378","https://openalex.org/W2023356470","https://openalex.org/W2026739112","https://openalex.org/W2028183169","https://openalex.org/W2029085915","https://openalex.org/W2044655708","https://openalex.org/W2055810539","https://openalex.org/W2061820546","https://openalex.org/W2063978378","https://openalex.org/W2070350383","https://openalex.org/W2073162961","https://openalex.org/W2073682446","https://openalex.org/W2075665712","https://openalex.org/W2085171844","https://openalex.org/W2086502504","https://openalex.org/W2090560989","https://openalex.org/W2092905491","https://openalex.org/W2101095383","https://openalex.org/W2105696555","https://openalex.org/W2110739536","https://openalex.org/W2114117605","https://openalex.org/W2122545105","https://openalex.org/W2124443086","https://openalex.org/W2135046866","https://openalex.org/W2135285239","https://openalex.org/W2138125837","https://openalex.org/W2144854288","https://openalex.org/W2152180036","https://openalex.org/W2167679437","https://openalex.org/W2168661533","https://openalex.org/W2171033594","https://openalex.org/W2333836441","https://openalex.org/W2799002609","https://openalex.org/W3001881796","https://openalex.org/W3140874755","https://openalex.org/W4213149192","https://openalex.org/W4237415315","https://openalex.org/W4243185644"],"related_works":["https://openalex.org/W4250106855","https://openalex.org/W2037261263","https://openalex.org/W3149087629","https://openalex.org/W4231036715","https://openalex.org/W2032074591","https://openalex.org/W1986156575","https://openalex.org/W3193619106","https://openalex.org/W1977853483","https://openalex.org/W2036032105","https://openalex.org/W2166757835"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,92],"reliable":[2],"extraction":[3,134],"of":[4,17,74,94,99],"features":[5],"from":[6,151],"mass":[7,19,53,102],"spectra":[8],"is":[9,38,56,96,137],"a":[10,27,39,61,71,82],"fundamental":[11],"step":[12],"in":[13,51],"the":[14,97,127,143],"automated":[15],"analysis":[16],"proteomic":[18],"spectrometry":[20],"(MS)":[21],"experiments.":[22],"RESULTS:":[23],"This":[24],"contribution":[25],"proposes":[26],"sparse":[28],"template":[29],"regression":[30],"approach":[31],"to":[32,64,125],"peak":[33,43],"picking":[34],"called":[35],"NITPICK.":[36],"NITPICK":[37,55,95,122,136],"Non-greedy,":[40],"Iterative":[41],"Template-based":[42],"PICKer":[44],"that":[45],"deconvolves":[46],"complex":[47],"overlapping":[48,100],"isotope":[49],"distributions":[50],"multicomponent":[52],"spectra.":[54,103],"based":[57],"on":[58,70],"fractional":[59],"averaging,":[60],"novel":[62],"extension":[63],"Senko's":[65],"well-known":[66],"averaging":[67],"model,":[68],"and":[69,112,118,147],"modified":[72],"version":[73],"sparse,":[75],"non-negative":[76],"least":[77],"angle":[78],"regression,":[79],"for":[80,116,142],"which":[81],"suitable,":[83],"statistically":[84],"motivated":[85],"early":[86],"stopping":[87],"criterion":[88],"has":[89,108],"been":[90,109],"derived.":[91],"strength":[93],"deconvolution":[98],"mixture":[101],"CONCLUSION:":[104],"Extensive":[105],"comparative":[106],"evaluation":[107],"carried":[110],"out":[111],"results":[113],"are":[114],"provided":[115],"simulated":[117],"real-world":[119],"data":[120],"sets.":[121],"outperforms":[123],"pepex,":[124],"date":[126],"only":[128],"alternate,":[129],"publicly":[130],"available,":[131],"non-greedy":[132],"feature":[133],"routine.":[135],"available":[138],"as":[139],"software":[140],"package":[141],"R":[144],"programming":[145],"language":[146],"can":[148],"be":[149],"downloaded":[150],"(http://hci.iwr.uni-heidelberg.de/mip/proteomics/).":[152]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":10}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
