{"id":"https://openalex.org/W2114222301","doi":"https://doi.org/10.1186/1471-2105-9-301","title":"Deducing topology of protein-protein interaction networks from experimentally measured sub-networks","display_name":"Deducing topology of protein-protein interaction networks from experimentally measured sub-networks","publication_year":2008,"publication_date":"2008-07-03","ids":{"openalex":"https://openalex.org/W2114222301","doi":"https://doi.org/10.1186/1471-2105-9-301","mag":"2114222301","pmid":"https://pubmed.ncbi.nlm.nih.gov/18598366"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-301","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-301","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-301","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-301","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101560260","display_name":"Ling Yang","orcid":"https://orcid.org/0000-0002-5506-7021"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ling Yang","raw_affiliation_strings":["Department of Medicine, David Geffen School of Medicine at University of California, Los Angeles, California 90095, USA . lyang@mednet.ucla.edu","Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, David Geffen School of Medicine at University of California, Los Angeles, California 90095, USA . lyang@mednet.ucla.edu","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088650648","display_name":"Thomas M. Vondriska","orcid":"https://orcid.org/0009-0000-5238-1245"},"institutions":[{"id":"https://openalex.org/I2803209242","display_name":"University of California System","ror":"https://ror.org/00pjdza24","country_code":"US","type":"education","lineage":["https://openalex.org/I2803209242"]},{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas M Vondriska","raw_affiliation_strings":["Anesthesiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Anesthesiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765","https://openalex.org/I2803209242"]},{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010332041","display_name":"Zhangang Han","orcid":"https://orcid.org/0000-0002-9758-6735"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhangang Han","raw_affiliation_strings":["Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102900534","display_name":"W. Robb MacLellan","orcid":"https://orcid.org/0000-0002-3066-2545"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W Robb MacLellan","raw_affiliation_strings":["Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009561014","display_name":"James N. Weiss","orcid":"https://orcid.org/0000-0002-8622-6427"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James N Weiss","raw_affiliation_strings":["Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Physiology, David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051699207","display_name":"Zhilin Qu","orcid":"https://orcid.org/0000-0001-5217-6022"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhilin Qu","raw_affiliation_strings":["Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Medicine (Cardiology), David Geffen School of Medicine at the University of California, Los Angeles, California, 90095, USA","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5101560260"],"corresponding_institution_ids":["https://openalex.org/I161318765"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.8298,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.72806163,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"9","issue":"1","first_page":"301","last_page":"301"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.9685999751091003,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9684000015258789,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.5834237933158875},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5426173806190491},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.5346568822860718},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.5185423493385315},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5109133124351501},{"id":"https://openalex.org/keywords/protein-interaction-networks","display_name":"Protein Interaction Networks","score":0.46944567561149597},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4131922423839569},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.31339186429977417},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.27005553245544434},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2259964644908905},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15172109007835388},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14609640836715698},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.06082215905189514}],"concepts":[{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.5834237933158875},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5426173806190491},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.5346568822860718},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.5185423493385315},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5109133124351501},{"id":"https://openalex.org/C2909613950","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Protein Interaction Networks","level":3,"score":0.46944567561149597},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4131922423839569},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.31339186429977417},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.27005553245544434},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2259964644908905},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15172109007835388},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14609640836715698},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.06082215905189514},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013598","descriptor_name":"Systems Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013598","descriptor_name":"Systems Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013598","descriptor_name":"Systems Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018401","descriptor_name":"Sample Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020798","descriptor_name":"Two-Hybrid System Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020798","descriptor_name":"Two-Hybrid System Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020798","descriptor_name":"Two-Hybrid System Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-9-301","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-301","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-301","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18598366","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18598366","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:8c92f843739a4be6862f629ce3251ed1","is_oa":true,"landing_page_url":"https://doaj.org/article/8c92f843739a4be6862f629ce3251ed1","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 301 (2008)","raw_type":"article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt3541t6mr","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/3541t6mr","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol 9, iss 1","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2474618","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2474618","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-301","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-301","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-301","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3530239307","display_name":null,"funder_award_id":"NHLBI","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7643161287","display_name":null,"funder_award_id":"NIH/NHLBI","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2114222301.pdf","grobid_xml":"https://content.openalex.org/works/W2114222301.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1599207601","https://openalex.org/W1639696487","https://openalex.org/W1965936846","https://openalex.org/W1973353128","https://openalex.org/W1976575590","https://openalex.org/W1988757233","https://openalex.org/W1995907191","https://openalex.org/W1997698259","https://openalex.org/W2008620264","https://openalex.org/W2012852001","https://openalex.org/W2023403198","https://openalex.org/W2025500283","https://openalex.org/W2028897509","https://openalex.org/W2031869443","https://openalex.org/W2037433020","https://openalex.org/W2045239101","https://openalex.org/W2048596679","https://openalex.org/W2060246191","https://openalex.org/W2065304353","https://openalex.org/W2065769502","https://openalex.org/W2076372398","https://openalex.org/W2079031683","https://openalex.org/W2080182143","https://openalex.org/W2092247630","https://openalex.org/W2093063536","https://openalex.org/W2101181377","https://openalex.org/W2101998831","https://openalex.org/W2104315543","https://openalex.org/W2108238425","https://openalex.org/W2113019448","https://openalex.org/W2113654464","https://openalex.org/W2130687290","https://openalex.org/W2130790725","https://openalex.org/W2134711219","https://openalex.org/W2144885342","https://openalex.org/W2148061480","https://openalex.org/W2148762636","https://openalex.org/W2153624566","https://openalex.org/W2156737316","https://openalex.org/W2158597576","https://openalex.org/W2163480486","https://openalex.org/W2167869241","https://openalex.org/W2172049947","https://openalex.org/W3103071483","https://openalex.org/W3103786587"],"related_works":["https://openalex.org/W1987705964","https://openalex.org/W2414873431","https://openalex.org/W2172097289","https://openalex.org/W4384303460","https://openalex.org/W2949751838","https://openalex.org/W2099913238","https://openalex.org/W1987363726","https://openalex.org/W82005175","https://openalex.org/W2146108849","https://openalex.org/W2145100112"],"abstract_inverted_index":{"The":[0],"topological":[1,17],"information":[2,18],"from":[3],"experimental":[4],"measured":[5],"networks":[6],"network":[7],"as":[8],"is":[9],"may":[10],"not":[11],"be":[12],"the":[13,20,34,37],"correct":[14],"source":[15],"for":[16],"about":[19],"parent":[21,38],"protein-protein":[22],"interaction":[23],"network.":[24,39],"We":[25],"define":[26],"a":[27],"core":[28],"sub-network":[29],"that":[30],"more":[31],"accurately":[32],"reflects":[33],"topology":[35],"of":[36]},"counts_by_year":[],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
