{"id":"https://openalex.org/W2142767173","doi":"https://doi.org/10.1186/1471-2105-9-281","title":"PURE: A webserver for the prediction of domains in unassigned regions in proteins","display_name":"PURE: A webserver for the prediction of domains in unassigned regions in proteins","publication_year":2008,"publication_date":"2008-06-14","ids":{"openalex":"https://openalex.org/W2142767173","doi":"https://doi.org/10.1186/1471-2105-9-281","mag":"2142767173","pmid":"https://pubmed.ncbi.nlm.nih.gov/18554415"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-281","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-281","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-281","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-281","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108256486","display_name":"Chilamakuri C. S. Reddy","orcid":null},"institutions":[{"id":"https://openalex.org/I24715933","display_name":"University of Reunion Island","ror":"https://ror.org/005ypkf75","country_code":"RE","type":"education","lineage":["https://openalex.org/I24715933"]},{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN","RE"],"is_corresponding":true,"raw_author_name":"Chilamakuri CS Reddy","raw_affiliation_strings":["National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India. csreddy@ncbs.res.in","Laboratoire de Biochimie et Genetique Moleculaire, Universite de La Reunion, La Reunion, France","National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, India"],"affiliations":[{"raw_affiliation_string":"National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India. csreddy@ncbs.res.in","institution_ids":["https://openalex.org/I194223965"]},{"raw_affiliation_string":"Laboratoire de Biochimie et Genetique Moleculaire, Universite de La Reunion, La Reunion, France","institution_ids":["https://openalex.org/I24715933"]},{"raw_affiliation_string":"National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016416266","display_name":"Khader Shameer","orcid":"https://orcid.org/0000-0002-9982-1911"},"institutions":[{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Khader Shameer","raw_affiliation_strings":["National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore, 560 065, India","National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bangalore, India"],"affiliations":[{"raw_affiliation_string":"National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore, 560 065, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]},{"raw_affiliation_string":"National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bangalore, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101918365","display_name":"Bernard Offmann","orcid":"https://orcid.org/0000-0002-6845-5883"},"institutions":[{"id":"https://openalex.org/I4210087880","display_name":"Centre Hospitalier Universitaire de La R\u00e9union","ror":"https://ror.org/004dan487","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210087880"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bernard O Offmann","raw_affiliation_strings":["Laboratoire de Biochimie et Genetique Moleculaire, Universite de La Reunion, 15 avenue Rene Cassin, BP 7151, 97715 Saint Denis Messag Cedex 09, La Reunion, France","Laboratoire de Biochimie et G\u00e9n\u00e9tique Mol\u00e9culaire, Universit\u00e9 de La R\u00e9union, La R\u00e9union, France"],"affiliations":[{"raw_affiliation_string":"Laboratoire de Biochimie et Genetique Moleculaire, Universite de La Reunion, 15 avenue Rene Cassin, BP 7151, 97715 Saint Denis Messag Cedex 09, La Reunion, France","institution_ids":[]},{"raw_affiliation_string":"Laboratoire de Biochimie et G\u00e9n\u00e9tique Mol\u00e9culaire, Universit\u00e9 de La R\u00e9union, La R\u00e9union, France","institution_ids":["https://openalex.org/I4210087880"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076779054","display_name":"Ramanathan Sowdhamini","orcid":"https://orcid.org/0000-0002-6642-2367"},"institutions":[{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ramanathan Sowdhamini","raw_affiliation_strings":["National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore, 560 065, India","National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bangalore, India"],"affiliations":[{"raw_affiliation_string":"National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore, 560 065, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]},{"raw_affiliation_string":"National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bangalore, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5108256486"],"corresponding_institution_ids":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I24715933"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.6893,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.70504129,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"9","issue":"1","first_page":"281","last_page":"281"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6590752005577087},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6398617625236511},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.6203567981719971},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5955665111541748},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5845458507537842},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5317807197570801},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.4603443443775177},{"id":"https://openalex.org/keywords/protein-structure-database","display_name":"Protein structure database","score":0.450603723526001},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4418308138847351},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.43371161818504333},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.42835739254951477},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4264352023601532},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.4260132908821106},{"id":"https://openalex.org/keywords/protein-domain","display_name":"Protein domain","score":0.42253953218460083},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.41112425923347473},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.36709946393966675},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.35322797298431396},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.2489018440246582},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2040172815322876},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1662297546863556},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16338703036308289},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11552897095680237},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1004442572593689},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.098530113697052}],"concepts":[{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6590752005577087},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6398617625236511},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.6203567981719971},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5955665111541748},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5845458507537842},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5317807197570801},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4603443443775177},{"id":"https://openalex.org/C136475424","wikidata":"https://www.wikidata.org/wiki/Q7251500","display_name":"Protein structure database","level":4,"score":0.450603723526001},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4418308138847351},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.43371161818504333},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.42835739254951477},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4264352023601532},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.4260132908821106},{"id":"https://openalex.org/C144292202","wikidata":"https://www.wikidata.org/wiki/Q898273","display_name":"Protein domain","level":3,"score":0.42253953218460083},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.41112425923347473},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.36709946393966675},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.35322797298431396},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.2489018440246582},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2040172815322876},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1662297546863556},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16338703036308289},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11552897095680237},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1004442572593689},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.098530113697052},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000262","descriptor_name":"Adenylyl Cyclases","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D000262","descriptor_name":"Adenylyl Cyclases","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D000262","descriptor_name":"Adenylyl Cyclases","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045686","descriptor_name":"Mycoplasma gallisepticum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045686","descriptor_name":"Mycoplasma gallisepticum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045686","descriptor_name":"Mycoplasma gallisepticum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-9-281","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-281","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-281","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18554415","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18554415","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-01198474v1","is_oa":true,"landing_page_url":"http://hal.univ-reunion.fr/hal-01198474","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"\\nISSN: \\n1471-2105","raw_type":"\\ninfo:eu-repo/semantics/article\\n"},{"id":"pmh:oai:HAL:hal-01198474v2","is_oa":true,"landing_page_url":"https://hal.univ-reunion.fr/hal-01198474","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2008, 9 (1), pp.1-8. &#x27E8;10.1186/1471-2105-9-281&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:fe17948a06a647b0b1e2a50bc265b257","is_oa":true,"landing_page_url":"https://doaj.org/article/fe17948a06a647b0b1e2a50bc265b257","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 281 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2474620","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2474620","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-281","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-281","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-281","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320326215","display_name":"Conseil R\u00e9gional de La R\u00e9union","ror":"https://ror.org/01hxzmb15"},{"id":"https://openalex.org/F4320335065","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2142767173.pdf","grobid_xml":"https://content.openalex.org/works/W2142767173.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W962656934","https://openalex.org/W1585827898","https://openalex.org/W1970522414","https://openalex.org/W1982481323","https://openalex.org/W1996423252","https://openalex.org/W2003144438","https://openalex.org/W2024645073","https://openalex.org/W2030776726","https://openalex.org/W2050152906","https://openalex.org/W2055193239","https://openalex.org/W2080336769","https://openalex.org/W2085277871","https://openalex.org/W2096525273","https://openalex.org/W2108067237","https://openalex.org/W2124871329","https://openalex.org/W2125079066","https://openalex.org/W2133062651","https://openalex.org/W2134571902","https://openalex.org/W2141885858","https://openalex.org/W2142529984","https://openalex.org/W2150934173","https://openalex.org/W2151831732","https://openalex.org/W2156125289","https://openalex.org/W2158714788","https://openalex.org/W2162171603","https://openalex.org/W4210400672","https://openalex.org/W4213149192","https://openalex.org/W4245543257"],"related_works":["https://openalex.org/W2161189461","https://openalex.org/W2103435205","https://openalex.org/W4213149192","https://openalex.org/W2161062388","https://openalex.org/W2022667872","https://openalex.org/W2018564950","https://openalex.org/W2154205489","https://openalex.org/W2050908913","https://openalex.org/W2926533301","https://openalex.org/W2087903152"],"abstract_inverted_index":{"We":[0],"have":[1],"implemented":[2],"PURE":[3],"protocol":[4],"as":[5],"a":[6],"web":[7],"server":[8,21],"for":[9],"rapid":[10],"and":[11,27],"comprehensive":[12],"analysis":[13],"of":[14],"unassigned":[15,36],"regions":[16],"in":[17,34],"the":[18,31,35],"proteins.":[19],"This":[20],"integrates":[22],"data":[23],"from":[24],"different":[25],"programs":[26],"provides":[28],"information":[29],"about":[30],"domains":[32],"encoded":[33],"regions.":[37]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
