{"id":"https://openalex.org/W1966024340","doi":"https://doi.org/10.1186/1471-2105-9-115","title":"Novel methodology for construction and pruning of quasi-median networks","display_name":"Novel methodology for construction and pruning of quasi-median networks","publication_year":2008,"publication_date":"2008-02-25","ids":{"openalex":"https://openalex.org/W1966024340","doi":"https://doi.org/10.1186/1471-2105-9-115","mag":"1966024340","pmid":"https://pubmed.ncbi.nlm.nih.gov/18298812"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-9-115","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-115","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-115","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-115","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112714582","display_name":"Sarah Ayling","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Sarah C Ayling","raw_affiliation_strings":["Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK. sarah.ayling@manchester.ac.uk","Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street,Manchester M1 7DN,UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK. sarah.ayling@manchester.ac.uk","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street,Manchester M1 7DN,UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032209447","display_name":"Terence A. Brown","orcid":"https://orcid.org/0000-0002-1006-1099"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Terence A Brown","raw_affiliation_strings":["Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","University of Manchester\u00a0"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"University of Manchester\u00a0","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5112714582"],"corresponding_institution_ids":["https://openalex.org/I28407311"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.4207,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.62837628,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"9","issue":"1","first_page":"115","last_page":"115"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8691999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8691999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.03660000115633011,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.02019999921321869,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6485378742218018},{"id":"https://openalex.org/keywords/pruning","display_name":"Pruning","score":0.5851812362670898},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5425345301628113},{"id":"https://openalex.org/keywords/phylogenetic-network","display_name":"Phylogenetic network","score":0.5322126150131226},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5066829323768616},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4901317059993744},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.4853443205356598},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4653518795967102},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.4478585720062256},{"id":"https://openalex.org/keywords/reduction","display_name":"Reduction (mathematics)","score":0.4472643733024597},{"id":"https://openalex.org/keywords/complex-network","display_name":"Complex network","score":0.4370586574077606},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36005276441574097},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32223182916641235},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2727692723274231},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1140807569026947}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6485378742218018},{"id":"https://openalex.org/C108010975","wikidata":"https://www.wikidata.org/wiki/Q500094","display_name":"Pruning","level":2,"score":0.5851812362670898},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5425345301628113},{"id":"https://openalex.org/C26619641","wikidata":"https://www.wikidata.org/wiki/Q3142246","display_name":"Phylogenetic network","level":4,"score":0.5322126150131226},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5066829323768616},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4901317059993744},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.4853443205356598},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4653518795967102},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.4478585720062256},{"id":"https://openalex.org/C111335779","wikidata":"https://www.wikidata.org/wiki/Q3454686","display_name":"Reduction (mathematics)","level":2,"score":0.4472643733024597},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.4370586574077606},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36005276441574097},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32223182916641235},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2727692723274231},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1140807569026947},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012341","descriptor_name":"RNA, Ribosomal, 5S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012341","descriptor_name":"RNA, Ribosomal, 5S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012341","descriptor_name":"RNA, Ribosomal, 5S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-9-115","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-115","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-115","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18298812","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18298812","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/79efa3a5-b68a-45d4-9450-8599e6dd8ad8","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/79efa3a5-b68a-45d4-9450-8599e6dd8ad8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ayling, S C & Brown, T A 2008, 'Novel methodology for construction and pruning of quasi-median networks.', BMC Bioinformatics, vol. 9, pp. 115. https://doi.org/10.1186/1471-2105-9-115","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:4dd1a45e59a149858ad0065b0c244931","is_oa":true,"landing_page_url":"https://doaj.org/article/4dd1a45e59a149858ad0065b0c244931","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 9, Iss 1, p 115 (2008)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2267707","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2267707","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/79efa3a5-b68a-45d4-9450-8599e6dd8ad8","is_oa":false,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/novel-methodology-for-construction-and-pruning-of-quasimedian-networks(79efa3a5-b68a-45d4-9450-8599e6dd8ad8).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ayling, S C & Brown, T A 2008, 'Novel methodology for construction and pruning of quasi-median networks.', BMC Bioinformatics, vol. 9, pp. 115. https://doi.org/10.1186/1471-2105-9-115","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-9-115","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-9-115","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-9-115","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life below water","score":0.8700000047683716,"id":"https://metadata.un.org/sdg/14"}],"awards":[{"id":"https://openalex.org/G2649919778","display_name":null,"funder_award_id":"NE/E015948/1","funder_id":"https://openalex.org/F4320334631","funder_display_name":"Natural Environment Research Council"},{"id":"https://openalex.org/G4851377641","display_name":null,"funder_award_id":"NE/E015948/1","funder_id":"https://openalex.org/F4320320022","funder_display_name":"Sight Research UK"}],"funders":[{"id":"https://openalex.org/F4320320022","display_name":"Sight Research UK","ror":"https://ror.org/03z2py885"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1966024340.pdf","grobid_xml":"https://content.openalex.org/works/W1966024340.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1834060250","https://openalex.org/W1901627773","https://openalex.org/W1971027082","https://openalex.org/W1984872498","https://openalex.org/W1996222640","https://openalex.org/W2008006702","https://openalex.org/W2017174932","https://openalex.org/W2019974578","https://openalex.org/W2022328091","https://openalex.org/W2037764264","https://openalex.org/W2057289831","https://openalex.org/W2070817597","https://openalex.org/W2082531683","https://openalex.org/W2096420865","https://openalex.org/W2100152398","https://openalex.org/W2102502479","https://openalex.org/W2104287568","https://openalex.org/W2118780696","https://openalex.org/W2752885492","https://openalex.org/W2800852802","https://openalex.org/W3145128584"],"related_works":["https://openalex.org/W4254268221","https://openalex.org/W2951650999","https://openalex.org/W2038264393","https://openalex.org/W147282674","https://openalex.org/W2112400707","https://openalex.org/W4300585845","https://openalex.org/W2101991559","https://openalex.org/W2132010001","https://openalex.org/W2152997891","https://openalex.org/W2951248153"],"abstract_inverted_index":{"BACKGROUND:":[0],"Visualising":[1],"the":[2,96,103,108,167,200,220,261],"evolutionary":[3,269],"history":[4,109],"of":[5,8,47,81,105,110,113,142,174,182,199,226,235,263,268],"a":[6,11,67,79,111,125,179,206,230,247],"set":[7,112],"sequences":[9,48,55,227],"is":[10,18],"challenge":[12],"for":[13,266],"molecular":[14],"phylogenetics.":[15],"One":[16],"approach":[17,237,265],"to":[19,27,65,88,136,147,238],"use":[20],"undirected":[21],"graphs,":[22],"such":[23,33],"as":[24,34,40,49],"median":[25,82],"networks,":[26],"visualise":[28],"phylogenies":[29],"where":[30],"reticulate":[31],"relationships":[32],"recombination":[35,119,151],"or":[36,118,130],"homoplasy":[37],"are":[38,63,78,85,145,156],"displayed":[39],"cycles.":[41],"Median":[42],"networks":[43,77,83,122,185],"contain":[44,115],"binary":[45,89,191],"representations":[46],"nodes,":[50],"with":[51],"edges":[52],"connecting":[53],"those":[54],"differing":[56],"at":[57,211],"one":[58,213],"character;":[59],"hypothetical":[60],"ancestral":[61],"nodes":[62],"invoked":[64],"generate":[66],"connected":[68,231],"network":[69,138,249],"which":[70,84,150,209,251],"contains":[71],"all":[72,188,224],"most":[73],"parsimonious":[74],"trees.":[75],"Quasi-median":[76],"generalisation":[80],"not":[86],"restricted":[87],"data,":[90],"although":[91],"phylogenetic":[92],"information":[93],"contained":[94],"within":[95,250],"multistate":[97,201],"positions":[98],"can":[99],"be":[100],"lost":[101],"during":[102],"preprocessing":[104],"data.":[106],"Where":[107],"samples":[114],"frequent":[116],"homoplasies":[117],"events":[120],"quasi-median":[121,175,184],"will":[123],"have":[124,133],"complex":[126,158],"topology.":[127],"Graph":[128],"reduction":[129,173],"pruning":[131,207],"methods":[132,144],"been":[134],"used":[135],"reduce":[137],"complexity":[139],"but":[140],"some":[141],"these":[143],"inapplicable":[146],"datasets":[148],"in":[149,161,170],"has":[152],"occurred":[153],"and":[154,172,192],"others":[155],"procedurally":[157],"and/or":[159],"result":[160],"disconnected":[162],"networks.":[163,176],"RESULTS:":[164],"We":[165,177,203],"address":[166],"problems":[168],"inherent":[169],"construction":[171],"describe":[178,205],"novel":[180],"method":[181],"generating":[183],"that":[186],"uses":[187],"characters,":[189],"both":[190],"multistate,":[193],"without":[194],"imposing":[195],"an":[196],"arbitrary":[197],"ordering":[198],"partitions.":[202],"also":[204],"mechanism":[208],"maintains":[210],"least":[212],"shortest":[214],"path":[215],"between":[216,223,254],"observed":[217],"sequences,":[218],"displaying":[219],"underlying":[221],"relations":[222],"pairs":[225],"while":[228],"maintaining":[229],"graph.":[232],"CONCLUSION:":[233],"Application":[234],"this":[236,264],"5S":[239],"rDNA":[240],"sequence":[241],"data":[242],"from":[243],"sea":[244],"beet":[245],"produced":[246],"pruned":[248],"genetic":[252],"isolation":[253],"populations":[255],"by":[256],"distance":[257],"was":[258],"evident,":[259],"demonstrating":[260],"value":[262],"exploration":[267],"relationships.":[270]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":3}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}