{"id":"https://openalex.org/W2121023174","doi":"https://doi.org/10.1186/1471-2105-8-s4-s1","title":"The 2006 Automated Function Prediction Meeting","display_name":"The 2006 Automated Function Prediction Meeting","publication_year":2007,"publication_date":"2007-05-01","ids":{"openalex":"https://openalex.org/W2121023174","doi":"https://doi.org/10.1186/1471-2105-8-s4-s1","mag":"2121023174"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-s4-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s4-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S4-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S4-S1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103549021","display_name":"Ana PC Rodrigues","orcid":null},"institutions":[{"id":"https://openalex.org/I188891513","display_name":"Sanford Burnham Prebys Medical Discovery Institute","ror":"https://ror.org/03m1g2s55","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I188891513"]},{"id":"https://openalex.org/I4210149207","display_name":"Institute for Medical Research","ror":"https://ror.org/05y2m0c09","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210149207"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ana PC Rodrigues","raw_affiliation_strings":["Burnham Institute for Medical Research, 10901 N, Torrey Pines Rd, La Jolla, CA 92037 USA. ana@burnham.org","Burnham Institute for Medical Research, La Jolla, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Burnham Institute for Medical Research, 10901 N, Torrey Pines Rd, La Jolla, CA 92037 USA. ana@burnham.org","institution_ids":["https://openalex.org/I188891513"]},{"raw_affiliation_string":"Burnham Institute for Medical Research, La Jolla, USA","institution_ids":["https://openalex.org/I188891513","https://openalex.org/I4210149207"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044495368","display_name":"Barry J. Grant","orcid":"https://orcid.org/0000-0002-2215-4196"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Barry J Grant","raw_affiliation_strings":["Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, 92093, USA","Department of Chemistry & Biochemistry, University of California San Diego,La Jolla,USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, 92093, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Chemistry & Biochemistry, University of California San Diego,La Jolla,USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010671148","display_name":"Adam Godzik","orcid":"https://orcid.org/0000-0002-2425-852X"},"institutions":[{"id":"https://openalex.org/I188891513","display_name":"Sanford Burnham Prebys Medical Discovery Institute","ror":"https://ror.org/03m1g2s55","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I188891513"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I4210149207","display_name":"Institute for Medical Research","ror":"https://ror.org/05y2m0c09","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210149207"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adam Godzik","raw_affiliation_strings":["Burnham Institute for Medical Research, 10901 N. Torrey Pines Rd., La Jolla, CA, 92037, USA","Center for Research in Biological Systems (CRBS), University of California, San Diego, 9500 Gilman Drive, La Jolla, MC, 0446 CA 92093, USA","Burnham Institute for Medical Research, La Jolla, USA","Center for Research in Biological Systems (CRBS), University of California, La Jolla, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Burnham Institute for Medical Research, 10901 N. Torrey Pines Rd., La Jolla, CA, 92037, USA","institution_ids":["https://openalex.org/I188891513"]},{"raw_affiliation_string":"Center for Research in Biological Systems (CRBS), University of California, San Diego, 9500 Gilman Drive, La Jolla, MC, 0446 CA 92093, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Burnham Institute for Medical Research, La Jolla, USA","institution_ids":["https://openalex.org/I188891513","https://openalex.org/I4210149207"]},{"raw_affiliation_string":"Center for Research in Biological Systems (CRBS), University of California, La Jolla, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041597050","display_name":"Iddo Friedberg","orcid":"https://orcid.org/0000-0002-1789-8000"},"institutions":[{"id":"https://openalex.org/I188891513","display_name":"Sanford Burnham Prebys Medical Discovery Institute","ror":"https://ror.org/03m1g2s55","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I188891513"]},{"id":"https://openalex.org/I4210149207","display_name":"Institute for Medical Research","ror":"https://ror.org/05y2m0c09","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210149207"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Iddo Friedberg","raw_affiliation_strings":["Burnham Institute for Medical Research, 10901 N. Torrey Pines Rd., La Jolla, CA, 92037, USA","Burnham Institute for Medical Research, La Jolla, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Burnham Institute for Medical Research, 10901 N. Torrey Pines Rd., La Jolla, CA, 92037, USA","institution_ids":["https://openalex.org/I188891513"]},{"raw_affiliation_string":"Burnham Institute for Medical Research, La Jolla, USA","institution_ids":["https://openalex.org/I188891513","https://openalex.org/I4210149207"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041597050"],"corresponding_institution_ids":["https://openalex.org/I188891513","https://openalex.org/I4210149207"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.3772,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.60984515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"8","issue":"S4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8673272132873535},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5822500586509705},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.561492383480072},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5517157316207886},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5263508558273315},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4654686450958252},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.42851221561431885},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3792899250984192},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3536947965621948},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33607012033462524},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3008735775947571},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15079647302627563},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09970638155937195},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0682368278503418}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8673272132873535},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5822500586509705},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.561492383480072},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5517157316207886},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5263508558273315},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4654686450958252},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.42851221561431885},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3792899250984192},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3536947965621948},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33607012033462524},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3008735775947571},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15079647302627563},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09970638155937195},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0682368278503418}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1186/1471-2105-8-s4-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s4-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S4-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1892079","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1892079","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-s4-s1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s4-s1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S4-S1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332603","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2121023174.pdf","grobid_xml":"https://content.openalex.org/works/W2121023174.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W43803018","https://openalex.org/W196131166","https://openalex.org/W1517588910","https://openalex.org/W1582362079","https://openalex.org/W1604281503","https://openalex.org/W1967453781","https://openalex.org/W1982481323","https://openalex.org/W1990495809","https://openalex.org/W1995541084","https://openalex.org/W2010437032","https://openalex.org/W2039925876","https://openalex.org/W2046736165","https://openalex.org/W2050220764","https://openalex.org/W2060148724","https://openalex.org/W2076620247","https://openalex.org/W2079470039","https://openalex.org/W2085277871","https://openalex.org/W2100990314","https://openalex.org/W2101495661","https://openalex.org/W2103017472","https://openalex.org/W2106575335","https://openalex.org/W2107710781","https://openalex.org/W2111973517","https://openalex.org/W2118619377","https://openalex.org/W2122849532","https://openalex.org/W2130675570","https://openalex.org/W2136280642","https://openalex.org/W2137167381","https://openalex.org/W2147908920","https://openalex.org/W2151792730","https://openalex.org/W2156575953","https://openalex.org/W2156899368","https://openalex.org/W2158714788","https://openalex.org/W2171962405","https://openalex.org/W4247074653","https://openalex.org/W4256395558"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2251519152"],"abstract_inverted_index":{"Genomic":[0],"scale":[1],"projects":[2],"have":[3,16,38],"compounded":[4],"the":[5,39,43],"need":[6],"for":[7],"rapid":[8],"and":[9,35],"reliable":[10],"functional":[11],"annotation":[12,45],"methods.Traditional":[13],"experimental":[14],"approaches":[15],"become":[17],"outpaced":[18],"resulting":[19],"in":[20],"an":[21],"ever-increasing":[22],"proportion":[23],"of":[24],"missing":[25],"annotations.Computational":[26],"approaches,":[27],"including":[28],"those":[29],"based":[30],"on":[31],"sequence,":[32],"expression,":[33],"interaction":[34],"tertiary":[36],"structure,":[37],"potential":[40],"to":[41],"impact":[42],"growing":[44],"deficit.":[46]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-27T08:26:11.824852","created_date":"2025-10-10T00:00:00"}
