{"id":"https://openalex.org/W2117632114","doi":"https://doi.org/10.1186/1471-2105-8-s3-s4","title":"AlzPharm: integration of neurodegeneration data using RDF","display_name":"AlzPharm: integration of neurodegeneration data using RDF","publication_year":2007,"publication_date":"2007-05-01","ids":{"openalex":"https://openalex.org/W2117632114","doi":"https://doi.org/10.1186/1471-2105-8-s3-s4","mag":"2117632114","pmid":"https://pubmed.ncbi.nlm.nih.gov/17493287"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S3-S4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058892069","display_name":"Hugo Y. K. Lam","orcid":"https://orcid.org/0000-0002-0564-6105"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hugo YK Lam","raw_affiliation_strings":["Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. Hugo.YK.Lam@yale.edu <Hugo.YK.Lam@yale.edu>","Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. Hugo.YK.Lam@yale.edu <Hugo.YK.Lam@yale.edu>","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072064820","display_name":"Luis Marenco","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luis Marenco","raw_affiliation_strings":["Center for Medical Informatics, Yale University, New Haven, CT, USA","Department of Anesthesiology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Informatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Anesthesiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007020202","display_name":"Tim W. Clark","orcid":"https://orcid.org/0000-0003-4060-7360"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tim Clark","raw_affiliation_strings":["Initiative in Innovative Computing, Harvard University, Cambridge, MA, USA","Massachusetts General Hospital, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Initiative in Innovative Computing, Harvard University, Cambridge, MA, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Massachusetts General Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101587703","display_name":"Yong Gao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yong Gao","raw_affiliation_strings":["Massachusetts General Hospital, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Massachusetts General Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042612748","display_name":"June Kinoshita","orcid":null},"institutions":[{"id":"https://openalex.org/I4210138184","display_name":"Alzforum","ror":"https://ror.org/03c94dv58","country_code":"US","type":"other","lineage":["https://openalex.org/I4210138184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"June Kinoshita","raw_affiliation_strings":["Alzheimer Research Forum, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alzheimer Research Forum, USA","institution_ids":["https://openalex.org/I4210138184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107002298","display_name":"Gordon M. Shepherd","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gordon Shepherd","raw_affiliation_strings":["Department of Neurobiology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurobiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028341826","display_name":"Perry L. Miller","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Perry Miller","raw_affiliation_strings":["Center for Medical Informatics, Yale University, New Haven, CT, USA","Department of Anesthesiology, Yale University, New Haven, CT, USA","Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Informatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Anesthesiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101542934","display_name":"Elizabeth Wu","orcid":"https://orcid.org/0000-0002-1260-2952"},"institutions":[{"id":"https://openalex.org/I4210138184","display_name":"Alzforum","ror":"https://ror.org/03c94dv58","country_code":"US","type":"other","lineage":["https://openalex.org/I4210138184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth Wu","raw_affiliation_strings":["Alzheimer Research Forum, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alzheimer Research Forum, USA","institution_ids":["https://openalex.org/I4210138184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111841099","display_name":"Gwendolyn T. Wong","orcid":null},"institutions":[{"id":"https://openalex.org/I4210138184","display_name":"Alzforum","ror":"https://ror.org/03c94dv58","country_code":"US","type":"other","lineage":["https://openalex.org/I4210138184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gwendolyn T Wong","raw_affiliation_strings":["Alzheimer Research Forum, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alzheimer Research Forum, USA","institution_ids":["https://openalex.org/I4210138184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100377358","display_name":"Nian Liu","orcid":"https://orcid.org/0000-0002-4108-7937"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nian Liu","raw_affiliation_strings":["Center for Medical Informatics, Yale University, New Haven, CT, USA","Department of Anesthesiology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Informatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Anesthesiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045500587","display_name":"Chiquito Crasto","orcid":"https://orcid.org/0000-0003-2083-5366"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chiquito Crasto","raw_affiliation_strings":["Center for Medical Informatics, Yale University, New Haven, CT, USA","Department of Neurobiology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Informatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Neurobiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088914228","display_name":"Thomas M. Morse","orcid":"https://orcid.org/0000-0002-2902-8272"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Morse","raw_affiliation_strings":["Department of Neurobiology, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurobiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084721167","display_name":"Susie Stephens","orcid":null},"institutions":[{"id":"https://openalex.org/I1342911587","display_name":"Oracle (United States)","ror":"https://ror.org/006c77m33","country_code":"US","type":"company","lineage":["https://openalex.org/I1342911587"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susie Stephens","raw_affiliation_strings":["Oracle, Burlington, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oracle, Burlington, MA, USA","institution_ids":["https://openalex.org/I1342911587"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110209950","display_name":"Kei\u2010Hoi Cheung","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kei-Hoi Cheung","raw_affiliation_strings":["Center for Medical Informatics, Yale University, New Haven, CT, USA","Department of Anesthesiology, Yale University, New Haven, CT, USA","Department of Computer Science, Yale University, New Haven, CT, USA","Department of Genetics, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Informatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Anesthesiology, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Computer Science, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Genetics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5110209950"],"corresponding_institution_ids":["https://openalex.org/I32971472"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2790},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2790},"fwci":3.1429,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.9241961,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"8","issue":"S3","first_page":"S4","last_page":"S4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7874000072479248,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7874000072479248,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.11559999734163284,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.01140000019222498,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8025735020637512},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.7435536980628967},{"id":"https://openalex.org/keywords/neuroinformatics","display_name":"Neuroinformatics","score":0.6991593241691589},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5705460906028748},{"id":"https://openalex.org/keywords/rdf-schema","display_name":"RDF Schema","score":0.5606973767280579},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.5181397199630737},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4787420630455017},{"id":"https://openalex.org/keywords/sparql","display_name":"SPARQL","score":0.47725579142570496},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.4679507315158844},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4417663812637329},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.39184606075286865},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3718745708465576},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.19665545225143433}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8025735020637512},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.7435536980628967},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.6991593241691589},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5705460906028748},{"id":"https://openalex.org/C15657843","wikidata":"https://www.wikidata.org/wiki/Q1751819","display_name":"RDF Schema","level":5,"score":0.5606973767280579},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.5181397199630737},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4787420630455017},{"id":"https://openalex.org/C41009113","wikidata":"https://www.wikidata.org/wiki/Q54871","display_name":"SPARQL","level":4,"score":0.47725579142570496},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.4679507315158844},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4417663812637329},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.39184606075286865},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3718745708465576},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.19665545225143433},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009419","descriptor_name":"Nerve Tissue Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009419","descriptor_name":"Nerve Tissue Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009419","descriptor_name":"Nerve Tissue Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010865","descriptor_name":"Pilot Projects","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000458","qualifier_name":"organization & administration","is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-8-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17493287","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17493287","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:dash.harvard.edu:1/4878947","is_oa":true,"landing_page_url":"http://nrs.harvard.edu/urn-3:HUL.InstRepos:4878947","pdf_url":null,"source":{"id":"https://openalex.org/S4306401540","display_name":"Digital Access to Scholarship at Harvard (DASH) (Harvard University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:562896a6531545f69c92090ff9f3e9e5","is_oa":false,"landing_page_url":"https://doaj.org/article/562896a6531545f69c92090ff9f3e9e5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss Suppl 3, p S4 (2007)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1892101","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1892101","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2574865383","display_name":null,"funder_award_id":"K25 HG02378","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G2689026750","display_name":null,"funder_award_id":"K25 HG002378","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G3844385788","display_name":"Exploring Approaches for Microarray Databases That Enable Flexible Design and Integrative Analysis","funder_award_id":"0135442","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4603702203","display_name":null,"funder_award_id":"P01 DC04732","funder_id":"https://openalex.org/F4320337352","funder_display_name":"National Institute on Deafness and Other Communication Disorders"},{"id":"https://openalex.org/G4618389508","display_name":null,"funder_award_id":"T15 LM 07056","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5411728568","display_name":null,"funder_award_id":"P01 DC004732","funder_id":"https://openalex.org/F4320337352","funder_display_name":"National Institute on Deafness and Other Communication Disorders"},{"id":"https://openalex.org/G6850715977","display_name":null,"funder_award_id":"P20 LM07253","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G7802115405","display_name":null,"funder_award_id":"P20 LM007253","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G8488313101","display_name":null,"funder_award_id":"T15 LM007056","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306135","display_name":"Ellison Medical Foundation","ror":"https://ror.org/01pqy3846"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337352","display_name":"National Institute on Deafness and Other Communication Disorders","ror":"https://ror.org/04mhx6838"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2117632114.pdf","grobid_xml":"https://content.openalex.org/works/W2117632114.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W175755846","https://openalex.org/W202247086","https://openalex.org/W1257729321","https://openalex.org/W1493831684","https://openalex.org/W1542417898","https://openalex.org/W1555563750","https://openalex.org/W1840032143","https://openalex.org/W1965610986","https://openalex.org/W1972793074","https://openalex.org/W1993597101","https://openalex.org/W2015142038","https://openalex.org/W2073985768","https://openalex.org/W2084998011","https://openalex.org/W2085887844","https://openalex.org/W2098780184","https://openalex.org/W2099137552","https://openalex.org/W2103017472","https://openalex.org/W2121131107","https://openalex.org/W2122637876","https://openalex.org/W2137079713","https://openalex.org/W2168340032","https://openalex.org/W2405707560","https://openalex.org/W2624907881"],"related_works":["https://openalex.org/W4206665951","https://openalex.org/W2079781157","https://openalex.org/W2615202182","https://openalex.org/W2563388676","https://openalex.org/W199330785","https://openalex.org/W3150241097","https://openalex.org/W2767591199","https://openalex.org/W4322622679","https://openalex.org/W4388184885","https://openalex.org/W2770351630"],"abstract_inverted_index":{"BACKGROUND:":[0],"Neuroscientists":[1],"often":[2],"need":[3],"to":[4,30,67,74,96,121,157,212,241,255,280,304],"access":[5],"a":[6,28,92,117,134,148,177,221,252],"wide":[7],"range":[8],"of":[9,55,81,86,127,141,150,180],"data":[10,17,43,54,119,153,168,175,201,215,229,258,284],"sets":[11,259],"distributed":[12],"over":[13,273],"the":[14,40,53,82,103,128,151,158,165,190,214,218,274],"Internet.":[15],"These":[16],"sets,":[18,44],"however,":[19],"are":[20,47,278],"typically":[21],"neither":[22],"integrated":[23,70,164,275],"nor":[24],"interoperable,":[25],"resulting":[26],"in":[27,185,194,220,307],"barrier":[29],"answering":[31],"complex":[32],"neuroscience":[33,51,87,242],"research":[34,60],"questions.":[35],"Domain":[36],"ontologies":[37],"can":[38,270],"enable":[39],"querying":[41],"heterogeneous":[42],"but":[45],"they":[46],"not":[48],"sufficient":[49],"for":[50,72,137,200,298],"since":[52],"interest":[56],"commonly":[57],"span":[58],"multiple":[59,233],"domains.":[61],"To":[62],"this":[63,98],"end,":[64],"e-Neuroscience":[65,99,300],"seeks":[66],"provide":[68],"an":[69],"platform":[71],"neuroscientists":[73],"discover":[75],"new":[76],"knowledge":[77],"through":[78],"seamless":[79],"integration":[80,126,285],"very":[83],"diverse":[84],"types":[85],"data.":[88,129],"Here":[89],"we":[90,248],"present":[91],"Semantic":[93,245,293],"Web":[94,183,208,246,294],"approach":[95,247,295],"building":[97],"framework":[100],"by":[101],"using":[102,143,282],"Resource":[104],"Description":[105],"Framework":[106],"(RDF)":[107],"and":[108,125,145,173,204,216,226,239,268,301],"its":[109],"vocabulary":[110],"description":[111],"language,":[112],"RDF":[113,155,171,191],"Schema":[114],"(RDFS),":[115],"as":[116],"standard":[118],"model":[120],"facilitate":[122],"both":[123],"representation":[124],"RESULTS:":[130],"We":[131,161],"have":[132,162],"constructed":[133],"pilot":[135,178,288],"ontology":[136],"BrainPharm":[138,152,167],"(a":[139],"subset":[140,149],"SenseLab)":[142],"RDFS":[144],"then":[146],"converted":[147,166],"into":[154],"according":[156],"ontological":[159],"structure.":[160],"also":[163,263],"with":[169],"existing":[170],"hypothesis":[172],"publication":[174],"from":[176],"version":[179],"SWAN":[181],"(Semantic":[182],"Applications":[184],"Neuromedicine).":[186],"Our":[187,287],"implementation":[188],"uses":[189],"Data":[192],"Model":[193],"Oracle":[195],"Database":[196],"10g":[197],"release":[198],"2":[199],"integration,":[202],"query,":[203],"inference,":[205],"while":[206],"our":[207,292],"interface":[209],"allows":[210],"users":[211],"query":[213],"retrieve":[217],"results":[219,289],"convenient":[222],"fashion.":[223],"CONCLUSION:":[224],"Accessing":[225],"integrating":[227],"biomedical":[228,309],"which":[230,277],"cuts":[231],"across":[232],"disciplines":[234],"will":[235],"be":[236,271,305],"increasingly":[237],"indispensable":[238],"beneficial":[240],"researchers.":[243],"The":[244],"undertook":[249],"has":[250],"demonstrated":[251],"promising":[253],"way":[254],"semantically":[256],"integrate":[257],"created":[260],"independently.":[261],"It":[262],"shows":[264],"how":[265],"advanced":[266],"queries":[267],"inferences":[269],"performed":[272],"data,":[276],"hard":[279],"achieve":[281],"traditional":[283],"approaches.":[286],"suggest":[290],"that":[291],"is":[296],"suitable":[297],"realizing":[299],"generic":[302],"enough":[303],"applied":[306],"other":[308],"fields.":[310]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
