{"id":"https://openalex.org/W1730532538","doi":"https://doi.org/10.1186/1471-2105-8-53","title":"PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results","display_name":"PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results","publication_year":2007,"publication_date":"2007-02-09","ids":{"openalex":"https://openalex.org/W1730532538","doi":"https://doi.org/10.1186/1471-2105-8-53","mag":"1730532538","pmid":"https://pubmed.ncbi.nlm.nih.gov/17291345"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-53","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-53","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-53","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-53","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055383192","display_name":"Ji He","orcid":"https://orcid.org/0000-0002-9556-652X"},"institutions":[{"id":"https://openalex.org/I4210126540","display_name":"Noble Research Institute","ror":"https://ror.org/02zta5505","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210126540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ji He","raw_affiliation_strings":["Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK 73401, USA. jhe@noble.org <jhe@noble.org>","Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK 73401, USA. jhe@noble.org <jhe@noble.org>","institution_ids":["https://openalex.org/I4210126540"]},{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA","institution_ids":["https://openalex.org/I4210126540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103136502","display_name":"Xinbin Dai","orcid":"https://orcid.org/0000-0001-8886-9875"},"institutions":[{"id":"https://openalex.org/I4210126540","display_name":"Noble Research Institute","ror":"https://ror.org/02zta5505","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210126540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xinbin Dai","raw_affiliation_strings":["Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA","Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA","institution_ids":["https://openalex.org/I4210126540"]},{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA","institution_ids":["https://openalex.org/I4210126540"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103560194","display_name":"Xuechun Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210126540","display_name":"Noble Research Institute","ror":"https://ror.org/02zta5505","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210126540"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xuechun Zhao","raw_affiliation_strings":["Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA","Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA","institution_ids":["https://openalex.org/I4210126540"]},{"raw_affiliation_string":"Bioinformatics Lab, Plant Biology Division, Samuel Roberts Noble Foundation, Ardmore, USA","institution_ids":["https://openalex.org/I4210126540"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5103560194"],"corresponding_institution_ids":["https://openalex.org/I4210126540"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2790},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2790},"fwci":1.8858,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.8449482,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"8","issue":"1","first_page":"53","last_page":"53"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.6510999798774719,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.6510999798774719,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.0917000025510788,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.05209999904036522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7690631151199341},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6442521810531616},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5845970511436462},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.5805659294128418},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.4743731617927551},{"id":"https://openalex.org/keywords/plan","display_name":"Plan (archaeology)","score":0.4654451310634613},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4354253113269806},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4070414900779724},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40163716673851013},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18539607524871826},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.10141581296920776},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.08867126703262329}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7690631151199341},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6442521810531616},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5845970511436462},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.5805659294128418},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.4743731617927551},{"id":"https://openalex.org/C2776505523","wikidata":"https://www.wikidata.org/wiki/Q4785468","display_name":"Plan (archaeology)","level":2,"score":0.4654451310634613},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4354253113269806},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4070414900779724},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40163716673851013},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18539607524871826},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.10141581296920776},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.08867126703262329},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-8-53","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-53","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-53","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17291345","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17291345","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:385aa9921ddc43af9a72fc54af6e9b6b","is_oa":true,"landing_page_url":"https://doaj.org/article/385aa9921ddc43af9a72fc54af6e9b6b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 53 (2007)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:1423489","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1800871","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-53","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-53","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-53","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1730532538.pdf","grobid_xml":"https://content.openalex.org/works/W1730532538.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W839878123","https://openalex.org/W1882963036","https://openalex.org/W1985928578","https://openalex.org/W2028170564","https://openalex.org/W2055043387","https://openalex.org/W2103017472","https://openalex.org/W2104086373","https://openalex.org/W2158714788","https://openalex.org/W2159482845","https://openalex.org/W2162993740","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2059565715","https://openalex.org/W2901823680","https://openalex.org/W1999129612","https://openalex.org/W2116418175","https://openalex.org/W2009940763","https://openalex.org/W4361192415","https://openalex.org/W2126804125","https://openalex.org/W2946410450","https://openalex.org/W2137318037","https://openalex.org/W4386637333"],"abstract_inverted_index":{"BACKGROUND:":[0],"BLAST":[1,58,92,123,162,176,178,190,213,257],"searches":[2],"are":[3,12,180,187,215,225,237,317],"widely":[4],"used":[5],"for":[6,15,41,56,69,254,262,300],"sequence":[7,33,46,117,146,193,270],"alignment.":[8],"The":[9,273,297],"search":[10],"results":[11,80,133,137,179,191,214],"commonly":[13],"adopted":[14],"various":[16,106,204],"functional":[17],"and":[18,30,52,71,81,88,109,115,127,152,184,186,192,209,212,266,281,286,315],"comparative":[19],"genomics":[20],"tasks":[21],"such":[22],"as":[23,149],"annotating":[24],"unknown":[25],"sequences,":[26],"investigating":[27],"gene":[28],"models":[29],"comparing":[31],"two":[32],"sets.":[34],"Advances":[35],"in":[36,141,198,201,203,217],"sequencing":[37],"technologies":[38],"pose":[39],"challenges":[40],"high-throughput":[42,122,256],"analysis":[43],"of":[44,50,65,74,84,129,138,223,283],"large-scale":[45],"data.":[47],"A":[48],"number":[49],"programs":[51],"hardware":[53],"solutions":[54,68],"exist":[55],"efficient":[57],"searching,":[59,124],"but":[60],"there":[61],"is":[62,95,277,289,303],"a":[63,96,170,248],"lack":[64],"generic":[66],"software":[67],"mining":[70],"personalized":[72,107],"management":[73,265],"the":[75,79,159,219,228,252],"results.":[76,272],"Systematically":[77],"reviewing":[78],"identifying":[82],"information":[83],"interest":[85,140],"remains":[86],"tedious":[87],"time-consuming.":[89],"RESULTS:":[90],"Personal":[91],"Navigator":[93],"(PLAN)":[94],"versatile":[97],"web":[98,275],"platform":[99],"that":[100],"helps":[101],"users":[102,241,294],"to":[103,239,251,292,319],"carry":[104],"out":[105],"pre-":[108],"post-BLAST":[110],"tasks,":[111],"including:":[112],"(1)":[113],"query":[114],"target":[116],"database":[118],"management,":[119],"(2)":[120],"automated":[121,145,255],"(3)":[125],"indexing":[126],"searching":[128],"results,":[130],"(4)":[131],"filtering":[132],"online,":[134],"(5)":[135],"managing":[136],"personal":[139],"favorite":[142],"categories,":[143],"(6)":[144],"annotation":[147],"(such":[148],"NCBI":[150],"NR":[151],"ontology-based":[153],"annotation).":[154],"PLAN":[155,245,274,288],"integrates,":[156],"by":[157,165,182,227],"default,":[158],"Decypher":[160],"hardware-based":[161],"solution":[163],"provided":[164,238,304,318],"Active":[166],"Motif":[167],"Inc.":[168],"with":[169],"greatly":[171],"improved":[172],"efficiency":[173],"over":[174],"conventional":[175],"software.":[177],"visualized":[181],"spreadsheets":[183],"graphs":[185],"full-text":[188],"searchable.":[189],"annotations":[194],"can":[195],"be":[196],"exported,":[197],"part":[199],"or":[200],"full,":[202],"formats":[205],"including":[206],"Microsoft":[207],"Excel":[208],"FASTA.":[210],"Sequences":[211],"organized":[216],"projects,":[218],"data":[220],"publication":[221],"levels":[222],"which":[224],"controlled":[226],"registered":[229],"project":[230],"owners.":[231],"In":[232],"addition,":[233],"all":[234],"analytical":[235],"functions":[236],"public":[240],"without":[242],"registration.":[243],"CONCLUSION:":[244],"has":[246],"proved":[247],"valuable":[249],"addition":[250],"community":[253],"searches,":[258],"and,":[259],"more":[260],"importantly,":[261],"knowledge":[263],"discovery,":[264],"sharing":[267],"based":[268],"on":[269,310],"alignment":[271],"interface":[276],"platform-independent,":[278],"easily":[279],"configurable":[280],"capable":[282],"comprehensive":[284],"expansion,":[285],"user-intuitive.":[287],"freely":[290],"available":[291],"academic":[293,320],"at":[295],"http://bioinfo.noble.org/plan/.":[296],"source":[298],"code":[299],"local":[301],"deployment":[302],"under":[305],"free":[306],"license.":[307],"Full":[308],"support":[309],"system":[311],"utilization,":[312],"installation,":[313],"configuration":[314],"customization":[316],"users.":[321]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
