{"id":"https://openalex.org/W2014519657","doi":"https://doi.org/10.1186/1471-2105-8-483","title":"PARPs database: A LIMS systems for protein-protein interaction data mining or laboratory information management system","display_name":"PARPs database: A LIMS systems for protein-protein interaction data mining or laboratory information management system","publication_year":2007,"publication_date":"2007-12-01","ids":{"openalex":"https://openalex.org/W2014519657","doi":"https://doi.org/10.1186/1471-2105-8-483","mag":"2014519657","pmid":"https://pubmed.ncbi.nlm.nih.gov/18093328"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-483","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-483","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-483","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-483","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071487081","display_name":"Arnaud Droit","orcid":"https://orcid.org/0000-0001-7922-790X"},"institutions":[{"id":"https://openalex.org/I4210108068","display_name":"Bausch Health (Canada)","ror":"https://ror.org/01zgpn844","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210108068"]},{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Arnaud Droit","raw_affiliation_strings":["Health and Environment Unit, Laval University Medical research Center, CHUQ, Qu\u00e9bec, Canada. arnaud.droit@gmail.com","Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health and Environment Unit, Laval University Medical research Center, CHUQ, Qu\u00e9bec, Canada. arnaud.droit@gmail.com","institution_ids":["https://openalex.org/I4210108068"]},{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039753855","display_name":"Joanna M. Hunter","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100264","display_name":"Caprion (Canada)","ror":"https://ror.org/017d1a722","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210100264"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Joanna M Hunter","raw_affiliation_strings":["Caprion Pharmaceuticals, Montr\u00e9al, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Caprion Pharmaceuticals, Montr\u00e9al, Canada","institution_ids":["https://openalex.org/I4210100264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064785160","display_name":"Mich\u00e8le Rouleau","orcid":"https://orcid.org/0000-0002-2357-1848"},"institutions":[{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mich\u00e8le Rouleau","raw_affiliation_strings":["Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090465949","display_name":"Chantal \u00c9thier","orcid":null},"institutions":[{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Chantal Ethier","raw_affiliation_strings":["Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053695299","display_name":"Aude Picard-Cloutier","orcid":null},"institutions":[{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Aude Picard-Cloutier","raw_affiliation_strings":["Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041677257","display_name":"David Bourgais","orcid":null},"institutions":[{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"David Bourgais","raw_affiliation_strings":["Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069507613","display_name":"Guy G. Poirier","orcid":"https://orcid.org/0000-0002-4869-1424"},"institutions":[{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Guy G Poirier","raw_affiliation_strings":["Eastern Quebec Proteomic Center, CHUQ, Quebec, Canada","Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Eastern Quebec Proteomic Center, CHUQ, Quebec, Canada","institution_ids":[]},{"raw_affiliation_string":"Health and Environment Unit, CHUQ, Laval University Medical research Center, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5069507613"],"corresponding_institution_ids":["https://openalex.org/I43406934"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.7925,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.67590278,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"8","issue":"1","first_page":"483","last_page":"483"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.7102904319763184},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.6156905293464661},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5624379515647888},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.550704836845398},{"id":"https://openalex.org/keywords/database-search-engine","display_name":"Database search engine","score":0.46976327896118164},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4631385803222656},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4590936601161957},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4270648658275604},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.42432090640068054},{"id":"https://openalex.org/keywords/tandem-mass-spectrometry","display_name":"Tandem mass spectrometry","score":0.4161345064640045},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3850327432155609},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33006978034973145},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.26793235540390015},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.25799083709716797},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.221187025308609},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1795332133769989},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.17208024859428406}],"concepts":[{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.7102904319763184},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.6156905293464661},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5624379515647888},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.550704836845398},{"id":"https://openalex.org/C48000682","wikidata":"https://www.wikidata.org/wiki/Q5227411","display_name":"Database search engine","level":3,"score":0.46976327896118164},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4631385803222656},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4590936601161957},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4270648658275604},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.42432090640068054},{"id":"https://openalex.org/C31827203","wikidata":"https://www.wikidata.org/wiki/Q874296","display_name":"Tandem mass spectrometry","level":3,"score":0.4161345064640045},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3850327432155609},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33006978034973145},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.26793235540390015},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.25799083709716797},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.221187025308609},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1795332133769989},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.17208024859428406},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071137","descriptor_name":"Poly (ADP-Ribose) Polymerase-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071137","descriptor_name":"Poly (ADP-Ribose) Polymerase-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071137","descriptor_name":"Poly (ADP-Ribose) Polymerase-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011065","descriptor_name":"Poly(ADP-ribose) Polymerases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-8-483","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-483","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-483","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18093328","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18093328","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2266781","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2266781","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:bad7226eb2e34600a734e369ff7eba93","is_oa":true,"landing_page_url":"https://doaj.org/article/bad7226eb2e34600a734e369ff7eba93","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 483 (2007)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-483","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-483","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-483","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2014519657.pdf","grobid_xml":"https://content.openalex.org/works/W2014519657.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1525575010","https://openalex.org/W1564306379","https://openalex.org/W1761594004","https://openalex.org/W1973507224","https://openalex.org/W1977907334","https://openalex.org/W1981593008","https://openalex.org/W1998017916","https://openalex.org/W2004407704","https://openalex.org/W2014150894","https://openalex.org/W2015556811","https://openalex.org/W2021275596","https://openalex.org/W2027439534","https://openalex.org/W2027637631","https://openalex.org/W2037036397","https://openalex.org/W2038000168","https://openalex.org/W2051795211","https://openalex.org/W2057706543","https://openalex.org/W2059572899","https://openalex.org/W2062798681","https://openalex.org/W2063413535","https://openalex.org/W2065304353","https://openalex.org/W2069162648","https://openalex.org/W2075426206","https://openalex.org/W2078651829","https://openalex.org/W2084619201","https://openalex.org/W2085376682","https://openalex.org/W2102664288","https://openalex.org/W2103017472","https://openalex.org/W2104084103","https://openalex.org/W2107580398","https://openalex.org/W2107903949","https://openalex.org/W2111208057","https://openalex.org/W2112078820","https://openalex.org/W2123280311","https://openalex.org/W2127637605","https://openalex.org/W2130706354","https://openalex.org/W2132582966","https://openalex.org/W2132899146","https://openalex.org/W2156070536","https://openalex.org/W2161062388","https://openalex.org/W2167609307","https://openalex.org/W2167869241","https://openalex.org/W2169085154","https://openalex.org/W2410998267","https://openalex.org/W4213060373","https://openalex.org/W4230932396","https://openalex.org/W4246055527","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W2051515248","https://openalex.org/W2004515150","https://openalex.org/W2099218842","https://openalex.org/W2116007721","https://openalex.org/W2042676997","https://openalex.org/W2059572899","https://openalex.org/W2025005085","https://openalex.org/W2150001247","https://openalex.org/W4243674246","https://openalex.org/W2323274923"],"abstract_inverted_index":{"BACKGROUND:":[0],"In":[1],"the":[2,14,19,92],"\"post-genome\"":[3],"era,":[4],"mass":[5,66],"spectrometry":[6,67],"(MS)":[7],"has":[8],"become":[9],"an":[10,33],"important":[11],"method":[12],"for":[13,62],"analysis":[15,58],"of":[16,22,36,91,107],"proteins":[17,95],"and":[18,44,59,94,112,120],"rapid":[20],"advancement":[21],"this":[23,99],"technique,":[24],"in":[25,32],"combination":[26],"with":[27],"other":[28,113],"proteomics":[29],"methods,":[30],"results":[31],"increasing":[34],"amount":[35],"proteome":[37],"data.":[38],"This":[39],"data":[40,57],"must":[41],"be":[42],"archived":[43],"analysed":[45],"using":[46],"specialized":[47],"bioinformatics":[48],"tools.":[49],"DESCRIPTION:":[50],"We":[51],"herein":[52],"describe":[53],"\"PARPs":[54],"database,\"":[55],"a":[56,73],"management":[60],"pipeline":[61],"liquid":[63],"chromatography":[64],"tandem":[65],"(LC-MS/MS)":[68],"proteomics.":[69],"PARPs":[70],"database":[71,82],"is":[72],"web-based":[74],"tool":[75],"whose":[76],"features":[77],"include":[78],"experiment":[79],"annotation,":[80],"protein":[81,84],"searching,":[83],"sequence":[85],"management,":[86],"as":[87,89],"well":[88],"data-mining":[90],"peptides":[93],"identified.":[96],"CONCLUSION:":[97],"Using":[98],"pipeline,":[100],"we":[101],"have":[102],"successfully":[103],"identified":[104],"several":[105],"interactions":[106],"biological":[108],"significance":[109],"between":[110],"PARP-1":[111],"proteins,":[114],"namely":[115],"RFC-1,":[116],"2,":[117],"3,":[118],"4":[119],"5.":[121]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
