{"id":"https://openalex.org/W2056396224","doi":"https://doi.org/10.1186/1471-2105-8-441","title":"A manually curated database of tetrapod mitochondrially encoded tRNA sequences and secondary structures","display_name":"A manually curated database of tetrapod mitochondrially encoded tRNA sequences and secondary structures","publication_year":2007,"publication_date":"2007-11-14","ids":{"openalex":"https://openalex.org/W2056396224","doi":"https://doi.org/10.1186/1471-2105-8-441","mag":"2056396224","pmid":"https://pubmed.ncbi.nlm.nih.gov/17999775"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-441","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-441","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-441","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-441","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088845825","display_name":"Konstantin Popadin","orcid":"https://orcid.org/0000-0002-2117-6086"},"institutions":[{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Konstantin Yu Popadin","raw_affiliation_strings":["Institute for Information Transmission Problems RAS, Bolshoi Karetny pereulok 19, Moscow. konstantinpopadin@gmail.com","Institute for Information Transmission Problems RAS, Moscow, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Transmission Problems RAS, Bolshoi Karetny pereulok 19, Moscow. konstantinpopadin@gmail.com","institution_ids":["https://openalex.org/I4210107660"]},{"raw_affiliation_string":"Institute for Information Transmission Problems RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210107660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039878738","display_name":"Leila Mamirova","orcid":null},"institutions":[{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Leila A Mamirova","raw_affiliation_strings":["Institute for Information Transmission Problems RAS, Bolshoi Karetny pereulok 19, Moscow, 127994, Russia","Institute for Information Transmission Problems RAS, Moscow, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Transmission Problems RAS, Bolshoi Karetny pereulok 19, Moscow, 127994, Russia","institution_ids":["https://openalex.org/I4210107660"]},{"raw_affiliation_string":"Institute for Information Transmission Problems RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210107660"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072121403","display_name":"Fyodor A. Kondrashov","orcid":"https://orcid.org/0000-0001-8243-4694"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fyodor A Kondrashov","raw_affiliation_strings":["Section on Ecology, Behavior and Evolution, Division of Biological Sciences, University of California at San Diego, 2218 Muir Biology Building, La Jolla, CA, 92093, USA","Section on Ecology, Behavior and Evolution, Division of Biological Sciences, University of California at San Diego, La Jolla, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Section on Ecology, Behavior and Evolution, Division of Biological Sciences, University of California at San Diego, 2218 Muir Biology Building, La Jolla, CA, 92093, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Section on Ecology, Behavior and Evolution, Division of Biological Sciences, University of California at San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5072121403"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.3761,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.60013341,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"8","issue":"1","first_page":"441","last_page":"441"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.666100025177002,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.666100025177002,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.16249999403953552,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10301","display_name":"Mitochondrial Function and Pathology","score":0.02850000001490116,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transfer-rna","display_name":"Transfer RNA","score":0.7947912216186523},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.6768921613693237},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5656886696815491},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5516289472579956},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5211004018783569},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.47758129239082336},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.46902716159820557},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4681800901889801},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4485515356063843},{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.4207969307899475},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3933559060096741},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2755456566810608},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.13507500290870667}],"concepts":[{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.7947912216186523},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6768921613693237},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5656886696815491},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5516289472579956},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5211004018783569},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.47758129239082336},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.46902716159820557},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4681800901889801},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4485515356063843},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.4207969307899475},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3933559060096741},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2755456566810608},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.13507500290870667},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000663","descriptor_name":"Amphibians","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000663","descriptor_name":"Amphibians","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000663","descriptor_name":"Amphibians","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025061","descriptor_name":"Dinosaurs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D025061","descriptor_name":"Dinosaurs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D025061","descriptor_name":"Dinosaurs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-8-441","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-441","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-441","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17999775","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17999775","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2206058","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2206058","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:a0c2066f8d444155a8388fc85265ede1","is_oa":false,"landing_page_url":"https://doaj.org/article/a0c2066f8d444155a8388fc85265ede1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 441 (2007)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-441","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-441","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-441","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2056396224.pdf","grobid_xml":"https://content.openalex.org/works/W2056396224.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1859693382","https://openalex.org/W1967681616","https://openalex.org/W1973043383","https://openalex.org/W1973211255","https://openalex.org/W2002165140","https://openalex.org/W2039243132","https://openalex.org/W2048875992","https://openalex.org/W2061104433","https://openalex.org/W2082841345","https://openalex.org/W2088507336","https://openalex.org/W2096525273","https://openalex.org/W2111896683","https://openalex.org/W2132926880","https://openalex.org/W2141157874","https://openalex.org/W2143988400","https://openalex.org/W2148860997","https://openalex.org/W2157470390","https://openalex.org/W2167673850","https://openalex.org/W2411038037","https://openalex.org/W4244818997","https://openalex.org/W4245543257"],"related_works":["https://openalex.org/W1982942059","https://openalex.org/W1976142521","https://openalex.org/W1984345785","https://openalex.org/W4383032973","https://openalex.org/W2123153443","https://openalex.org/W2884291362","https://openalex.org/W2130308509","https://openalex.org/W2528651403","https://openalex.org/W4200520333","https://openalex.org/W2129156298"],"abstract_inverted_index":{"BACKGROUND:":[0],"Mitochondrial":[1],"tRNAs":[2,52,78,126],"have":[3,20,31],"been":[4,32],"the":[5,36,63,77,103,134,151,174],"subject":[6],"of":[7,23,38,49,76,84,123,136,144,154,176,182,208,210],"study":[8],"for":[9,67,94],"structural":[10,26],"biologists":[11,19],"interested":[12],"in":[13,169],"their":[14,196,211],"secondary":[15,89,104,152,178],"structure":[16,90,105,179],"characteristics,":[17],"evolutionary":[18],"researched":[21],"patterns":[22],"compensatory":[24],"and":[25,28,73,88,102,148,180],"evolution":[27,175],"medical":[29],"studies":[30],"directed":[33],"towards":[34],"understanding":[35],"basis":[37],"human":[39],"disease.":[40],"However,":[41],"an":[42],"up":[43],"to":[44,165,203],"date,":[45],"manually":[46,120],"curated":[47,121],"database":[48,122,161,202],"mitochondrially":[50,124],"encoded":[51,125],"from":[53,71,127],"higher":[54,206],"animals":[55],"is":[56],"currently":[57],"not":[58],"available.":[59],"DESCRIPTION:":[60],"We":[61,117],"obtained":[62],"complete":[64],"mitochondrial":[65,98,156,191],"sequence":[66],"277":[68],"tetrapod":[69,146],"species":[70],"GenBank":[72],"re-annotated":[74],"all":[75,145],"based":[79,106],"on":[80],"a":[81,119,205],"multiple":[82,107],"alignment":[83],"each":[85,95],"tRNA":[86,100,197],"gene":[87,198],"prediction":[91,181],"made":[92],"independently":[93],"tRNA.":[96],"The":[97],"(mt)":[99],"sequences":[101,193],"alignments":[108],"are":[109],"freely":[110],"available":[111],"as":[112],"Supplemental":[113],"Information":[114],"online.":[115],"CONCLUSION:":[116],"compiled":[118],"tetrapods":[128],"with":[129],"completely":[130],"sequenced":[131],"genomes.":[132],"In":[133,186],"course":[135],"our":[137,167,201],"work,":[138],"we":[139],"reannotated":[140],"more":[141],"than":[142],"10%":[143],"mt-tRNAs":[147],"subsequently":[149],"predicted":[150],"structures":[153],"6060":[155],"tRNAs.":[157],"This":[158],"carefully":[159],"constructed":[160],"can":[162],"be":[163],"utilized":[164],"enhance":[166],"knowledge":[168],"several":[170],"different":[171],"fields":[172],"including":[173],"mt-tRNA":[177,184],"pathogenic":[183],"mutations.":[185],"addition,":[187],"researchers":[188],"reporting":[189],"novel":[190],"genome":[192],"should":[194],"check":[195],"annotations":[199],"against":[200],"ensure":[204],"level":[207],"fidelity":[209],"annotation.":[212]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-08-23T07:36:19.812096","created_date":"2025-10-10T00:00:00"}