{"id":"https://openalex.org/W1978487056","doi":"https://doi.org/10.1186/1471-2105-8-406","title":"MetaLook: a 3D visualisation software for marine ecological genomics","display_name":"MetaLook: a 3D visualisation software for marine ecological genomics","publication_year":2007,"publication_date":"2007-10-22","ids":{"openalex":"https://openalex.org/W1978487056","doi":"https://doi.org/10.1186/1471-2105-8-406","mag":"1978487056","pmid":"https://pubmed.ncbi.nlm.nih.gov/17953757"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-406","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-406","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-406","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-406","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086334945","display_name":"Thierry Lombardot","orcid":"https://orcid.org/0000-0003-4157-0029"},"institutions":[{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Thierry Lombardot","raw_affiliation_strings":["Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany. tlombard@mpi-bremen.de","Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany. tlombard@mpi-bremen.de","institution_ids":["https://openalex.org/I4210103014"]},{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany","institution_ids":["https://openalex.org/I4210103014"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014425944","display_name":"Renzo Kottmann","orcid":null},"institutions":[{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Renzo Kottmann","raw_affiliation_strings":["Jacobs University Bremen gGmbH, D-28759, Bremen, Germany","Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359, Bremen, Germany","Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany","Jacobs University Bremen gGmbH, Bremen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jacobs University Bremen gGmbH, D-28759, Bremen, Germany","institution_ids":["https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359, Bremen, Germany","institution_ids":["https://openalex.org/I4210103014"]},{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany","institution_ids":["https://openalex.org/I4210103014"]},{"raw_affiliation_string":"Jacobs University Bremen gGmbH, Bremen, Germany","institution_ids":["https://openalex.org/I193619901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077713973","display_name":"Gr\u00e9gory Giuliani","orcid":"https://orcid.org/0000-0002-1825-8865"},"institutions":[{"id":"https://openalex.org/I163613716","display_name":"United Nations Economic Commission for Europe","ror":"https://ror.org/038dn8481","country_code":"CH","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I163613716","https://openalex.org/I2801247003"]},{"id":"https://openalex.org/I202262619","display_name":"United Nations Environment Programme","ror":"https://ror.org/015z29x25","country_code":"KE","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I202262619"]}],"countries":["CH","KE"],"is_corresponding":false,"raw_author_name":"Gregory Giuliani","raw_affiliation_strings":["Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I163613716"]},{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I202262619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009655007","display_name":"Andrea Bono","orcid":"https://orcid.org/0000-0002-6719-671X"},"institutions":[{"id":"https://openalex.org/I163613716","display_name":"United Nations Economic Commission for Europe","ror":"https://ror.org/038dn8481","country_code":"CH","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I163613716","https://openalex.org/I2801247003"]},{"id":"https://openalex.org/I202262619","display_name":"United Nations Environment Programme","ror":"https://ror.org/015z29x25","country_code":"KE","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I202262619"]}],"countries":["CH","KE"],"is_corresponding":false,"raw_author_name":"Andrea de Bono","raw_affiliation_strings":["Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I163613716"]},{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I202262619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055445968","display_name":"Nans Addor","orcid":"https://orcid.org/0000-0002-6057-3930"},"institutions":[{"id":"https://openalex.org/I163613716","display_name":"United Nations Economic Commission for Europe","ror":"https://ror.org/038dn8481","country_code":"CH","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I163613716","https://openalex.org/I2801247003"]},{"id":"https://openalex.org/I202262619","display_name":"United Nations Environment Programme","ror":"https://ror.org/015z29x25","country_code":"KE","type":"other","lineage":["https://openalex.org/I1286959531","https://openalex.org/I202262619"]}],"countries":["CH","KE"],"is_corresponding":false,"raw_author_name":"Nans Addor","raw_affiliation_strings":["Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, 1219, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I163613716"]},{"raw_affiliation_string":"Division of Early Warning and Assessment, Global Resource Information Database \u2013 Europe, United Nations Environment Programme, International Environment House, Ch\u00e2telaine, Switzerland","institution_ids":["https://openalex.org/I202262619"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091470163","display_name":"Frank Oliver Gl\u00f6ckner","orcid":"https://orcid.org/0000-0001-8528-9023"},"institutions":[{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Frank Oliver Gl\u00f6ckner","raw_affiliation_strings":["Jacobs University Bremen gGmbH, D-28759, Bremen, Germany","Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359, Bremen, Germany","Jacobs University Bremen gGmbH, Bremen, Germany","Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jacobs University Bremen gGmbH, D-28759, Bremen, Germany","institution_ids":["https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, D-28359, Bremen, Germany","institution_ids":["https://openalex.org/I4210103014"]},{"raw_affiliation_string":"Jacobs University Bremen gGmbH, Bremen, Germany","institution_ids":["https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Max Planck Institute for Marine Microbiology, Bremen, Germany","institution_ids":["https://openalex.org/I4210103014"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5086334945"],"corresponding_institution_ids":["https://openalex.org/I4210103014"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1250,"currency":"EUR","value_usd":1348},"fwci":1.5804,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.81294649,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"8","issue":"1","first_page":"406","last_page":"406"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.19859999418258667,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.19859999418258667,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.16200000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14427","display_name":"Environmental Monitoring and Data Management","score":0.1023000031709671,"subfield":{"id":"https://openalex.org/subfields/1907","display_name":"Geology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/georeference","display_name":"Georeference","score":0.6732581853866577},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6515430212020874},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6426114439964294},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.6129037737846375},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5576025247573853},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5488787293434143},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5372348427772522},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5057010650634766},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.48457252979278564},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.42926838994026184},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41438382863998413},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.34153124690055847},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.3184172511100769},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2498188018798828},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15545609593391418}],"concepts":[{"id":"https://openalex.org/C75145180","wikidata":"https://www.wikidata.org/wiki/Q772007","display_name":"Georeference","level":2,"score":0.6732581853866577},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6515430212020874},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6426114439964294},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.6129037737846375},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5576025247573853},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5488787293434143},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5372348427772522},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5057010650634766},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.48457252979278564},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.42926838994026184},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41438382863998413},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.34153124690055847},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.3184172511100769},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2498188018798828},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15545609593391418},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C100970517","wikidata":"https://www.wikidata.org/wiki/Q52107","display_name":"Physical geography","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004463","descriptor_name":"Ecology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004463","descriptor_name":"Ecology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004463","descriptor_name":"Ecology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008386","descriptor_name":"Marine Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008386","descriptor_name":"Marine Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008386","descriptor_name":"Marine Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1186/1471-2105-8-406","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-406","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-406","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17953757","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17953757","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:unige.ch:aou:unige:19293","is_oa":true,"landing_page_url":"https://archive-ouverte.unige.ch/unige:19293","pdf_url":null,"source":{"id":"https://openalex.org/S4306402259","display_name":"Archive ouverte UNIGE (University of Geneva)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114457229","host_organization_name":"University of Geneva","host_organization_lineage":["https://openalex.org/I114457229"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics, vol. 8, no. 1 (2007) 406","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.zora.uzh.ch:77078","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Lombardot, Thierry; Kottmann, Renzo; Giuliani, Gregory; de Bono, Andrea; Addor, Nans; Gl\u00f6ckner, Frank O  (2007). MetaLook: a 3D visualisation software for marine ecological genomics.  BMC Bioinformatics, 8:406.","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:6513560d700f4148b7806609e55d6177","is_oa":false,"landing_page_url":"https://doaj.org/article/6513560d700f4148b7806609e55d6177","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 406 (2007)","raw_type":"article"},{"id":"pmh:oai:escidoc.org:escidoc:2485428","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0001-CDE6-5","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2134934","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2134934","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_2485428","is_oa":true,"landing_page_url":"https://hdl.handle.net/21.11116/0000-0001-CDE6-5","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.5167/uzh-77078","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-77078","pdf_url":null,"source":{"id":"https://openalex.org/S7407051291","display_name":"Universit\u00e4t Z\u00fcrich, ZORA","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-406","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-406","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-406","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8700000047683716,"id":"https://metadata.un.org/sdg/14","display_name":"Life below water"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322434","display_name":"Max-Planck-Gesellschaft","ror":"https://ror.org/01hhn8329"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1978487056.pdf","grobid_xml":"https://content.openalex.org/works/W1978487056.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1510529783","https://openalex.org/W1741410789","https://openalex.org/W1886587267","https://openalex.org/W1985162429","https://openalex.org/W2006162922","https://openalex.org/W2037084529","https://openalex.org/W2039470079","https://openalex.org/W2039585182","https://openalex.org/W2042893247","https://openalex.org/W2058982051","https://openalex.org/W2059090552","https://openalex.org/W2081324593","https://openalex.org/W2084251919","https://openalex.org/W2093830129","https://openalex.org/W2096525273","https://openalex.org/W2113601822","https://openalex.org/W2122513531","https://openalex.org/W2123085724","https://openalex.org/W2123246614","https://openalex.org/W2132661997","https://openalex.org/W2137081869","https://openalex.org/W2158714788","https://openalex.org/W2169289406","https://openalex.org/W4245543257"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W3198631238","https://openalex.org/W4388282505","https://openalex.org/W2032854667"],"abstract_inverted_index":{"BACKGROUND:":[0],"Marine":[1],"ecological":[2,82],"genomics":[3],"can":[4,115,134],"be":[5,135],"defined":[6],"as":[7],"the":[8,15,27,40,73,121,132,141,148,157,163,192],"application":[9],"of":[10,19,25,29,33,54,67,80,156,159,194,204],"genomic":[11,83],"sciences":[12],"to":[13,62,89,98,119,124,169,178,197],"understand":[14],"structure":[16],"and":[17,31,49,58,78,84,177,183,201],"function":[18],"marine":[20,81],"ecosystems.":[21],"In":[22],"this":[23,64],"field":[24],"research,":[26],"analysis":[28,79],"genomes":[30],"metagenomes":[32],"environmental":[34,117,175],"relevance":[35],"must":[36],"take":[37],"into":[38],"account":[39],"corresponding":[41],"habitat":[42,90,126,184,202],"(contextual)":[43],"data,":[44],"e.g.":[45],"water":[46],"depth,":[47],"physical":[48],"chemical":[50],"parameters.":[51,91,185],"The":[52,113],"creation":[53,193],"specialised":[55,195],"software":[56,75,187],"tools":[57,196],"databases":[59],"is":[60,188,211],"requisite":[61],"allow":[63],"new":[65],"kind":[66],"integrated":[68],"analysis.":[69],"RESULTS:":[70],"We":[71],"implemented":[72],"MetaLook":[74,92,166,210],"for":[76],"visualisation":[77],"metagenomic":[85],"data":[86,172],"with":[87,137,207],"respect":[88],"offers":[93],"a":[94,104,109,189],"three-dimensional":[95],"user":[96,114],"interface":[97],"interactively":[99],"visualise":[100],"DNA":[101],"sequences":[102,122],"on":[103,108],"world":[105],"map,":[106],"based":[107],"centralised":[110],"georeferenced":[111,142],"database.":[112],"define":[116],"containers":[118,133],"organise":[120],"according":[123],"different":[125],"criteria.":[127],"To":[128],"find":[129],"similar":[130],"sequences,":[131,146],"queried":[136],"either":[138],"genes":[139,182,205],"from":[140],"database":[143],"or":[144],"user-imported":[145],"using":[147],"BLAST":[149],"algorithm.":[150],"This":[151,186],"allows":[152,167],"an":[153],"interactive":[154],"assessment":[155],"distribution":[158],"gene":[160],"functions":[161],"in":[162,173],"environment.":[164],"CONCLUSION:":[165],"scientists":[168],"investigate":[170],"sequence":[171],"their":[174],"context":[176],"explore":[179],"correlations":[180],"between":[181],"step":[190],"towards":[191],"study":[198],"constrained":[199],"distributions":[200],"specificity":[203],"correlated":[206],"specific":[208],"processes.":[209],"available":[212],"at:":[213],"http://www.megx.net/metalook.":[214]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
