{"id":"https://openalex.org/W2164518967","doi":"https://doi.org/10.1186/1471-2105-8-400","title":"CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes","display_name":"CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes","publication_year":2007,"publication_date":"2007-10-18","ids":{"openalex":"https://openalex.org/W2164518967","doi":"https://doi.org/10.1186/1471-2105-8-400","mag":"2164518967","pmid":"https://pubmed.ncbi.nlm.nih.gov/17945016"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-400","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-400","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-400","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-400","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024859938","display_name":"Gert Sclep","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098178","display_name":"VIB-UGent Center for Plant Systems Biology","ror":"https://ror.org/01qnqmc89","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210098178"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Gert Sclep","raw_affiliation_strings":["Department of Plant Systems Biology, VIB, Technologiepark 927, 9052 Ghent, Belgium. gert.sclep@tecnoparco.org","Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Technologiepark 927, 9052 Ghent, Belgium. gert.sclep@tecnoparco.org","institution_ids":["https://openalex.org/I4210098178"]},{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I4210098178"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104992977","display_name":"Joke Allemeersch","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115377","display_name":"VIB-KU Leuven Center for Microbiology","ror":"https://ror.org/02bpp8r91","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210115377","https://openalex.org/I99464096"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Joke Allemeersch","raw_affiliation_strings":["ESAT/SISTA, K.U.Leuven, Kasteelpark Arenberg 10, 3001, Heverlee, Belgium","Microarray facility, VIB, Gasthuisberg Onderwijs en Navorsing 1, Herestraat 49, 3000, Leuven, Belgium"],"affiliations":[{"raw_affiliation_string":"ESAT/SISTA, K.U.Leuven, Kasteelpark Arenberg 10, 3001, Heverlee, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Microarray facility, VIB, Gasthuisberg Onderwijs en Navorsing 1, Herestraat 49, 3000, Leuven, Belgium","institution_ids":["https://openalex.org/I4210115377"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066081150","display_name":"Robin Liechti","orcid":"https://orcid.org/0000-0001-8351-4776"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Robin Liechti","raw_affiliation_strings":["Swiss Institute of Bioinformatics, Genopode building, 1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Genopode building, 1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048709535","display_name":"Bj\u00f6rn De Meyer","orcid":null},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]},{"id":"https://openalex.org/I4210098178","display_name":"VIB-UGent Center for Plant Systems Biology","ror":"https://ror.org/01qnqmc89","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210098178"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Bj\u00f6rn De Meyer","raw_affiliation_strings":["Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I32597200"]},{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I4210098178"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062748038","display_name":"Jim Beynon","orcid":null},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jim Beynon","raw_affiliation_strings":["Department of Plant Genetics & Biology, HRI, University of Warwick, Warwick, CV35 9EF, UK"],"affiliations":[{"raw_affiliation_string":"Department of Plant Genetics & Biology, HRI, University of Warwick, Warwick, CV35 9EF, UK","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054511549","display_name":"Rishikesh P. Bhalerao","orcid":"https://orcid.org/0000-0003-4384-7036"},"institutions":[{"id":"https://openalex.org/I4210120671","display_name":"Ume\u00e5 Plant Science Centre","ror":"https://ror.org/02ehp0f77","country_code":"SE","type":"facility","lineage":["https://openalex.org/I298625061","https://openalex.org/I4210120671","https://openalex.org/I90267481"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Rishikesh Bhalerao","raw_affiliation_strings":["Department of Forest Genetics and Plant Physiology, SLU, SE-901 83, Ume\u00e5, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Forest Genetics and Plant Physiology, SLU, SE-901 83, Ume\u00e5, Sweden","institution_ids":["https://openalex.org/I4210120671"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041984163","display_name":"Yves Moreau","orcid":"https://orcid.org/0000-0002-4647-6560"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Yves Moreau","raw_affiliation_strings":["ESAT/SISTA, K.U.Leuven, Kasteelpark Arenberg 10, 3001, Heverlee, Belgium"],"affiliations":[{"raw_affiliation_string":"ESAT/SISTA, K.U.Leuven, Kasteelpark Arenberg 10, 3001, Heverlee, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045845938","display_name":"Wilfried Nietfeld","orcid":null},"institutions":[{"id":"https://openalex.org/I4210142260","display_name":"Max Planck Institute for Molecular Genetics","ror":"https://ror.org/03ate3e03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210142260"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Wilfried Nietfeld","raw_affiliation_strings":["Department of Vertebrate Genomics, Max Planck Institute for Molecular Genetics, 14195, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Vertebrate Genomics, Max Planck Institute for Molecular Genetics, 14195, Berlin, Germany","institution_ids":["https://openalex.org/I4210142260"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058438430","display_name":"Jean\u2010Pierre Renou","orcid":"https://orcid.org/0000-0001-6372-0484"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jean-Pierre Renou","raw_affiliation_strings":["Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale, INRA, 91057, Evry cedex, France"],"affiliations":[{"raw_affiliation_string":"Unit\u00e9 de Recherche en G\u00e9nomique V\u00e9g\u00e9tale, INRA, 91057, Evry cedex, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019629618","display_name":"Philippe Reymond","orcid":"https://orcid.org/0000-0002-3341-6200"},"institutions":[{"id":"https://openalex.org/I97565354","display_name":"University of Lausanne","ror":"https://ror.org/019whta54","country_code":"CH","type":"education","lineage":["https://openalex.org/I97565354"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Philippe Reymond","raw_affiliation_strings":["Department of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Plant Molecular Biology, Biophore Building, University of Lausanne, 1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I97565354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077915624","display_name":"Martin Kuiper","orcid":"https://orcid.org/0000-0002-1171-9876"},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]},{"id":"https://openalex.org/I4210098178","display_name":"VIB-UGent Center for Plant Systems Biology","ror":"https://ror.org/01qnqmc89","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210098178"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Martin TR Kuiper","raw_affiliation_strings":["Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I32597200"]},{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I4210098178"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003582239","display_name":"Pierre Hilson","orcid":"https://orcid.org/0000-0003-4617-1908"},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]},{"id":"https://openalex.org/I4210098178","display_name":"VIB-UGent Center for Plant Systems Biology","ror":"https://ror.org/01qnqmc89","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210098178"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Pierre Hilson","raw_affiliation_strings":["Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Ghent University, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I32597200"]},{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Technologiepark 927, 9052, Ghent, Belgium","institution_ids":["https://openalex.org/I4210098178"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5024859938"],"corresponding_institution_ids":["https://openalex.org/I4210098178"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.8824,"has_fulltext":true,"cited_by_count":55,"citation_normalized_percentile":{"value":0.85472039,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"8","issue":"1","first_page":"400","last_page":"400"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.7567999958992004},{"id":"https://openalex.org/keywords/amplicon","display_name":"Amplicon","score":0.7096090316772461},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6592097878456116},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6244480609893799},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6053744554519653},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5943517088890076},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5935788750648499},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5161898732185364},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.44208836555480957},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.4196256697177887},{"id":"https://openalex.org/keywords/gene-prediction","display_name":"Gene prediction","score":0.41632962226867676},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2353672981262207},{"id":"https://openalex.org/keywords/polymerase-chain-reaction","display_name":"Polymerase chain reaction","score":0.09016755223274231}],"concepts":[{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.7567999958992004},{"id":"https://openalex.org/C8185291","wikidata":"https://www.wikidata.org/wiki/Q2844457","display_name":"Amplicon","level":4,"score":0.7096090316772461},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6592097878456116},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6244480609893799},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6053744554519653},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5943517088890076},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5935788750648499},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5161898732185364},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.44208836555480957},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.4196256697177887},{"id":"https://openalex.org/C105565629","wikidata":"https://www.wikidata.org/wiki/Q1248292","display_name":"Gene prediction","level":4,"score":0.41632962226867676},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2353672981262207},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.09016755223274231},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005060","descriptor_name":"Europe","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005060","descriptor_name":"Europe","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005060","descriptor_name":"Europe","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005060","descriptor_name":"Europe","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":10,"locations":[{"id":"doi:10.1186/1471-2105-8-400","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-400","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-400","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17945016","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17945016","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:iris.unil.ch:iris/116446","is_oa":true,"landing_page_url":"https://iris.unil.ch/handle/iris/116446","pdf_url":"https://iris.unil.ch/bitstreams/d5cb69a0-1b32-4ae5-91cb-02d07c2459eb/download","source":{"id":"https://openalex.org/S7407055444","display_name":"IRIS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:HAL:hal-04373012v1","is_oa":true,"landing_page_url":"https://hal.inrae.fr/hal-04373012","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2007, 8 (1), pp.400. &#x27E8;10.1186/1471-2105-8-400&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:archive.ugent.be:409512","is_oa":true,"landing_page_url":"https://biblio.ugent.be/publication/409512","pdf_url":null,"source":{"id":"https://openalex.org/S4306400478","display_name":"Ghent University Academic Bibliography (Ghent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32597200","host_organization_name":"Ghent University","host_organization_lineage":["https://openalex.org/I32597200"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:208383ddb55d4de79d6f759e07e28f92","is_oa":true,"landing_page_url":"https://doaj.org/article/208383ddb55d4de79d6f759e07e28f92","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 400 (2007)","raw_type":"article"},{"id":"pmh:oai:edoc.mpg.de:335847","is_oa":false,"landing_page_url":"http://edoc.mpg.de/335847","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, v.8, 400-400 (2007)","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2147040","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2147040","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_1584761","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0010-815E-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:serval.unil.ch:BIB_49C36C5E31B2","is_oa":true,"landing_page_url":"https://serval.unil.ch/notice/serval:BIB_49C36C5E31B2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401797","display_name":"SERVAL (Universit\u00e9 de Lausanne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210093590","host_organization_name":"Swiss School of Archaeology in Greece","host_organization_lineage":["https://openalex.org/I4210093590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol. 8, no. 1, pp. 400","raw_type":"info:eu-repo/semantics/submittedVersion"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-400","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-400","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-400","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.46000000834465027,"display_name":"Partnerships for the goals"},{"id":"https://metadata.un.org/sdg/9","score":0.44999998807907104,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G3514550006","display_name":null,"funder_award_id":"Centre","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7228997265","display_name":null,"funder_award_id":"Vetenskapsr\u00e5","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"},{"id":"https://openalex.org/F4320323831","display_name":"Universit\u00e9 de Lausanne","ror":"https://ror.org/019whta54"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2164518967.pdf","grobid_xml":"https://content.openalex.org/works/W2164518967.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W67115383","https://openalex.org/W1499500424","https://openalex.org/W1534196162","https://openalex.org/W2012363927","https://openalex.org/W2067252556","https://openalex.org/W2074955506","https://openalex.org/W2087064593","https://openalex.org/W2100471807","https://openalex.org/W2106356212","https://openalex.org/W2116931343","https://openalex.org/W2120163732","https://openalex.org/W2125346198","https://openalex.org/W2135304075","https://openalex.org/W2137986897","https://openalex.org/W2138473401","https://openalex.org/W2145314005","https://openalex.org/W2147170044","https://openalex.org/W2153236054","https://openalex.org/W2158714788","https://openalex.org/W2166265186"],"related_works":["https://openalex.org/W2069695727","https://openalex.org/W1996185163","https://openalex.org/W2084813257","https://openalex.org/W2045929470","https://openalex.org/W2081127504","https://openalex.org/W2122223946","https://openalex.org/W4233500668","https://openalex.org/W1974145978","https://openalex.org/W2132372375","https://openalex.org/W1977867163"],"abstract_inverted_index":{"To":[0],"update":[1],"the":[2,13,31,37,48,56],"CATMA":[3,51,57],"GST":[4],"repertoire,":[5],"we":[6],"designed":[7],"7,289":[8],"additional":[9],"sequence":[10],"tags,":[11],"bringing":[12],"total":[14],"number":[15],"of":[16,33,40],"tagged":[17],"TAIR6-annotated":[18],"Arabidopsis":[19],"nuclear":[20],"protein-coding":[21],"genes":[22],"to":[23],"26,173.":[24],"This":[25],"resource":[26],"is":[27,53],"used":[28],"both":[29],"for":[30],"production":[32],"spotted":[34],"microarrays":[35],"and":[36],"large-scale":[38],"cloning":[39],"hairpin":[41],"RNA":[42],"silencing":[43],"vectors.":[44],"All":[45],"information":[46],"about":[47],"resulting":[49],"updated":[50],"repertoire":[52],"available":[54],"through":[55],"database":[58],"http://www.catma.org.":[59]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":10}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
