{"id":"https://openalex.org/W2075326868","doi":"https://doi.org/10.1186/1471-2105-8-197","title":"MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data","display_name":"MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data","publication_year":2007,"publication_date":"2007-06-13","ids":{"openalex":"https://openalex.org/W2075326868","doi":"https://doi.org/10.1186/1471-2105-8-197","mag":"2075326868","pmid":"https://pubmed.ncbi.nlm.nih.gov/17567892"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-8-197","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-197","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-197","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-197","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062436502","display_name":"J\u00fcrgen Hartler","orcid":"https://orcid.org/0000-0002-1095-6458"},"institutions":[{"id":"https://openalex.org/I132118926","display_name":"Austrian Institute of Technology","ror":"https://ror.org/04knbh022","country_code":"AT","type":"facility","lineage":["https://openalex.org/I132118926"]},{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"J\u00fcrgen Hartler","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, Graz, Austria. juergen.hartler@tugraz.at <juergen.hartler@tugraz.at>","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","Austrian Research Centers GmbH -ARC, eHealth Systems, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, Graz, Austria. juergen.hartler@tugraz.at <juergen.hartler@tugraz.at>","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Austrian Research Centers GmbH -ARC, eHealth Systems, Graz, Austria","institution_ids":["https://openalex.org/I132118926"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037209090","display_name":"Gerhard Thallinger","orcid":"https://orcid.org/0000-0002-2864-5404"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Gerhard G Thallinger","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012115652","display_name":"Gernot Stocker","orcid":"https://orcid.org/0000-0001-8326-1852"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Gernot Stocker","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033788352","display_name":"Alexander Sturn","orcid":null},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Alexander Sturn","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000006299","display_name":"Thomas R. Burkard","orcid":"https://orcid.org/0000-0002-0884-2929"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Thomas R Burkard","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056630216","display_name":"Erik K\u00f6rner","orcid":"https://orcid.org/0000-0002-5639-6177"},"institutions":[{"id":"https://openalex.org/I103365165","display_name":"FH JOANNEUM University of Applied Sciences","ror":"https://ror.org/03kkbqm48","country_code":"AT","type":"education","lineage":["https://openalex.org/I103365165"]},{"id":"https://openalex.org/I4210134488","display_name":"B\u00f6hler Edelstahl (Austria)","ror":"https://ror.org/03kmak902","country_code":"AT","type":"company","lineage":["https://openalex.org/I4210134488"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Erik K\u00f6rner","raw_affiliation_strings":["FH Joanneum, Kapfenberg, Werk-VI-Sra\u00dfe 46, 8605, Kapfenberg, Austria","FH Joanneum, Kapfenberg, Kapfenberg, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"FH Joanneum, Kapfenberg, Werk-VI-Sra\u00dfe 46, 8605, Kapfenberg, Austria","institution_ids":["https://openalex.org/I103365165","https://openalex.org/I4210134488"]},{"raw_affiliation_string":"FH Joanneum, Kapfenberg, Kapfenberg, Austria","institution_ids":["https://openalex.org/I103365165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034876360","display_name":"Robert Rader","orcid":null},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Robert Rader","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063181496","display_name":"Andreas Schmidt","orcid":"https://orcid.org/0000-0001-9369-3747"},"institutions":[{"id":"https://openalex.org/I4210105054","display_name":"Christian Doppler Laboratory for Thermoelectricity","ror":"https://ror.org/01cbw5x35","country_code":"AT","type":"facility","lineage":["https://openalex.org/I129774422","https://openalex.org/I145847075","https://openalex.org/I4210105054"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Andreas Schmidt","raw_affiliation_strings":["Christian Doppler Laboratory for Proteome Analysis, Dr. Bohr-Gasse 3, 1030, Vienna, Austria","Christian Doppler Laboratory for Proteome Analysis, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Christian Doppler Laboratory for Proteome Analysis, Dr. Bohr-Gasse 3, 1030, Vienna, Austria","institution_ids":["https://openalex.org/I4210105054"]},{"raw_affiliation_string":"Christian Doppler Laboratory for Proteome Analysis, Vienna, Austria","institution_ids":["https://openalex.org/I4210105054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014342884","display_name":"Karl Mechtler","orcid":"https://orcid.org/0000-0002-3392-9946"},"institutions":[{"id":"https://openalex.org/I195525897","display_name":"Research Institute of Molecular Pathology","ror":"https://ror.org/02c5jsm26","country_code":"AT","type":"facility","lineage":["https://openalex.org/I195525897"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Karl Mechtler","raw_affiliation_strings":["Research Institute of Molecular Pathology, Dr. Bohr-Gasse 7, 1030, Vienna, Austria","Research Institute of Molecular Pathology, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Institute of Molecular Pathology, Dr. Bohr-Gasse 7, 1030, Vienna, Austria","institution_ids":["https://openalex.org/I195525897"]},{"raw_affiliation_string":"Research Institute of Molecular Pathology, Vienna, Austria","institution_ids":["https://openalex.org/I195525897"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084751312","display_name":"Zlatko Trajanoski","orcid":"https://orcid.org/0000-0002-0636-7351"},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Zlatko Trajanoski","raw_affiliation_strings":["Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]},{"raw_affiliation_string":"Institute for Genomics and Bioinformatics and Christian-Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5084751312"],"corresponding_institution_ids":["https://openalex.org/I4092182"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":5.7424,"has_fulltext":true,"cited_by_count":48,"citation_normalized_percentile":{"value":0.9669515,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"8","issue":"1","first_page":"197","last_page":"197"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9656999707221985,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9656999707221985,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.0019000000320374966,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.715398371219635},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.6955658793449402},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.46971574425697327},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.4635666310787201},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.4593818783760071},{"id":"https://openalex.org/keywords/mascot","display_name":"Mascot","score":0.4560236632823944},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.455780953168869},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.45050835609436035},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4411124289035797},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.36447444558143616},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34476763010025024},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3029613494873047},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12018829584121704},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10967996716499329}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.715398371219635},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.6955658793449402},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.46971574425697327},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.4635666310787201},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.4593818783760071},{"id":"https://openalex.org/C2778160393","wikidata":"https://www.wikidata.org/wiki/Q18670161","display_name":"Mascot","level":2,"score":0.4560236632823944},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.455780953168869},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.45050835609436035},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4411124289035797},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.36447444558143616},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34476763010025024},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3029613494873047},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12018829584121704},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10967996716499329},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010449","descriptor_name":"Peptide Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010449","descriptor_name":"Peptide Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010449","descriptor_name":"Peptide Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-8-197","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-197","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-197","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17567892","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17567892","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:http://openlib.tugraz.at/5d66fce023163","is_oa":true,"landing_page_url":"http://openlib.tugraz.at/5d66fce023163","pdf_url":null,"source":{"id":"https://openalex.org/S4306400660","display_name":"TUGraz OPEN Library (Graz University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4092182","host_organization_name":"Graz University of Technology","host_organization_lineage":["https://openalex.org/I4092182"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":null},{"id":"pmh:info:fedora/oai:univie.ac.at:o:244065","is_oa":true,"landing_page_url":"https://phaidra.univie.ac.at/o:244065","pdf_url":null,"source":{"id":"https://openalex.org/S4306401993","display_name":"Phaidra (Universit\u00e4t Wien)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I129774422","host_organization_name":"University of Vienna","host_organization_lineage":["https://openalex.org/I129774422"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN:1471-2105","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:226b7abb628845729ff5165a9e6f2fa7","is_oa":true,"landing_page_url":"https://doaj.org/article/226b7abb628845729ff5165a9e6f2fa7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 8, Iss 1, p 197 (2007)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1906842","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1906842","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:unipub.uni-graz.at:5840986","is_oa":true,"landing_page_url":"https://resolver.obvsg.at/urn:nbn:at:at-ubg:3-9714","pdf_url":null,"source":{"id":"https://openalex.org/S4306400359","display_name":"Unipub UB Graz (Universit\u00e4t Graz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I15766117","host_organization_name":"University of Graz","host_organization_lineage":["https://openalex.org/I15766117"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-8-197","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-8-197","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-8-197","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4300000071525574,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321004","display_name":"\u00d6sterreichischen Akademie der Wissenschaften","ror":"https://ror.org/03anc3s24"},{"id":"https://openalex.org/F4320322015","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087"},{"id":"https://openalex.org/F4320323991","display_name":"Bundesministerium f\u00fcr Bildung, Wissenschaft und Kultur","ror":"https://ror.org/03rrfep50"},{"id":"https://openalex.org/F4320325582","display_name":"Karl-Franzens-Universit\u00e4t Graz","ror":"https://ror.org/01faaaf77"},{"id":"https://openalex.org/F4320326239","display_name":"Medizinische Universit\u00e4t Graz","ror":"https://ror.org/02n0bts35"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2075326868.pdf","grobid_xml":"https://content.openalex.org/works/W2075326868.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1544923801","https://openalex.org/W1702681437","https://openalex.org/W1966621931","https://openalex.org/W1969782660","https://openalex.org/W1972101418","https://openalex.org/W1981593008","https://openalex.org/W1986175756","https://openalex.org/W1994994140","https://openalex.org/W2004407704","https://openalex.org/W2004626510","https://openalex.org/W2015292449","https://openalex.org/W2018412008","https://openalex.org/W2021275596","https://openalex.org/W2026465178","https://openalex.org/W2031095666","https://openalex.org/W2035291731","https://openalex.org/W2041145084","https://openalex.org/W2045234988","https://openalex.org/W2047275456","https://openalex.org/W2057761395","https://openalex.org/W2086216615","https://openalex.org/W2106882534","https://openalex.org/W2109606373","https://openalex.org/W2112078820","https://openalex.org/W2124166542","https://openalex.org/W2126297361","https://openalex.org/W2126320593","https://openalex.org/W2130706354","https://openalex.org/W2132899146","https://openalex.org/W2135557996","https://openalex.org/W2137718938","https://openalex.org/W2146103026","https://openalex.org/W2148047088","https://openalex.org/W2148632411","https://openalex.org/W2161811833","https://openalex.org/W2166469913"],"related_works":["https://openalex.org/W2288906059","https://openalex.org/W1982829397","https://openalex.org/W2106414650","https://openalex.org/W2347437365","https://openalex.org/W1999412725","https://openalex.org/W4376862128","https://openalex.org/W4390205769","https://openalex.org/W2124137418","https://openalex.org/W4296966554","https://openalex.org/W2391458050"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,134],"advancements":[2],"of":[3,34,57,78,91,111,128,171,183],"proteomics":[4,58,188],"technologies":[5],"have":[6,43],"led":[7],"to":[8,147,168,186],"a":[9,51],"rapid":[10],"increase":[11],"in":[12],"the":[13,32,45,65,76,79,92,95,124,161,165,169,187],"number,":[14],"size":[15],"and":[16,24,38,55,74,89,104,117,120,140,164,180],"rate":[17],"at":[18,157],"which":[19],"datasets":[20,30],"are":[21],"generated.":[22],"Managing":[23],"extracting":[25],"valuable":[26],"information":[27],"from":[28,94],"such":[29],"requires":[31],"use":[33,170],"data":[35,138],"management":[36,54],"platforms":[37],"computational":[39],"approaches.":[40],"RESULTS:":[41],"We":[42],"developed":[44],"MAss":[46],"SPECTRometry":[47],"Analysis":[48,84,127],"System":[49],"(MASPECTRAS),":[50],"platform":[52,176],"for":[53],"analysis":[56],"LC-MS/MS":[59],"data.":[60],"MASPECTRAS":[61,153],"is":[62,154],"based":[63,113],"on":[64,114],"Proteome":[66],"Experimental":[67],"Data":[68],"Repository":[69],"(PEDRo)":[70],"relational":[71],"database":[72],"schema":[73],"follows":[75],"guidelines":[77],"Proteomics":[80],"Standards":[81],"Initiative":[82],"(PSI).":[83],"modules":[85],"include:":[86],"1)":[87],"import":[88],"parsing":[90],"results":[93],"search":[96],"engines":[97],"SEQUEST,":[98],"Mascot,":[99],"Spectrum":[100],"Mill,":[101],"X!":[102],"Tandem,":[103],"OMSSA;":[105],"2)":[106],"peptide":[107],"validation,":[108],"3)":[109],"clustering":[110],"proteins":[112],"Markov":[115],"Clustering":[116],"multiple":[118],"alignments;":[119],"4)":[121],"quantification":[122],"using":[123],"Automated":[125],"Statistical":[126],"Protein":[129],"Abundance":[130],"Ratios":[131],"algorithm":[132],"(ASAPRatio).":[133],"system":[135],"provides":[136],"customizable":[137],"retrieval":[139],"visualization":[141],"tools,":[142],"as":[143,145],"well":[144],"export":[146],"PRoteomics":[148],"IDEntifications":[149],"public":[150],"repository":[151],"(PRIDE).":[152],"freely":[155],"available":[156],"http://genome.tugraz.at/maspectras":[158],"CONCLUSION:":[159],"Given":[160],"unique":[162],"features":[163],"flexibility":[166],"due":[167],"standard":[172],"software":[173],"technology,":[174],"our":[175],"represents":[177],"significant":[178],"advance":[179],"could":[181],"be":[182],"great":[184],"interest":[185],"community.":[189]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
