{"id":"https://openalex.org/W2129955304","doi":"https://doi.org/10.1186/1471-2105-7-473","title":"CAFTAN: a tool for fast mapping, and quality assessment of cDNAs","display_name":"CAFTAN: a tool for fast mapping, and quality assessment of cDNAs","publication_year":2006,"publication_date":"2006-10-25","ids":{"openalex":"https://openalex.org/W2129955304","doi":"https://doi.org/10.1186/1471-2105-7-473","mag":"2129955304","pmid":"https://pubmed.ncbi.nlm.nih.gov/17064411"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-473","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-473","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-473","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-473","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037940023","display_name":"Coral del Val","orcid":"https://orcid.org/0000-0002-2212-2039"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["DE","ES"],"is_corresponding":true,"raw_author_name":"Coral del Val","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120 Heidelberg, Germany. c.delval@dkfz.de","DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany","Dept. Computer Science and Artificial Intelligence, ETSI Informatics University of Granada, Granada, Spain"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120 Heidelberg, Germany. c.delval@dkfz.de","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Dept. Computer Science and Artificial Intelligence, ETSI Informatics University of Granada, Granada, Spain","institution_ids":["https://openalex.org/I173304897"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017467127","display_name":"Vladimir Kuryshev","orcid":"https://orcid.org/0000-0002-9429-1501"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Vladimir Yurjevich Kuryshev","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108525492","display_name":"Karl Heinz Glatting","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Karl-Heinz Glatting","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102900245","display_name":"Peter B. Ernst","orcid":"https://orcid.org/0000-0001-7777-1813"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter Ernst","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081292832","display_name":"Agnes Hotz\u2010Wagenblatt","orcid":"https://orcid.org/0000-0003-1523-2093"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Agnes Hotz-Wagenblatt","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111925386","display_name":"Annemarie Poustka","orcid":null},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Annemarie Poustka","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109939535","display_name":"S\u00e1ndor Suhai","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sandor Suhai","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division Molecular Biophysics, Im Neuenheimer Feld 580, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016727101","display_name":"Stefan Wiemann","orcid":"https://orcid.org/0000-0003-4683-3174"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Wiemann","raw_affiliation_strings":["DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Im Neuenheimer Feld 580, D-69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"DKFZ, German Cancer Research Center, Division of Molecular Genome Analysis, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5037940023"],"corresponding_institution_ids":["https://openalex.org/I173304897","https://openalex.org/I17937529","https://openalex.org/I223822909"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.0,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.13115952,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"7","issue":"1","first_page":"473","last_page":"473"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.813805341720581},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5910438299179077},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5753829479217529},{"id":"https://openalex.org/keywords/complementary-dna","display_name":"Complementary DNA","score":0.5658411979675293},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5653324723243713},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.5409780740737915},{"id":"https://openalex.org/keywords/splice","display_name":"splice","score":0.512237012386322},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4546915888786316},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.44170665740966797},{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.43141573667526245},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.42380428314208984},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.22620704770088196}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.813805341720581},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5910438299179077},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5753829479217529},{"id":"https://openalex.org/C187882448","wikidata":"https://www.wikidata.org/wiki/Q283478","display_name":"Complementary DNA","level":3,"score":0.5658411979675293},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5653324723243713},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.5409780740737915},{"id":"https://openalex.org/C2780989783","wikidata":"https://www.wikidata.org/wiki/Q7578557","display_name":"splice","level":3,"score":0.512237012386322},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4546915888786316},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.44170665740966797},{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.43141573667526245},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.42380428314208984},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22620704770088196},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-7-473","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-473","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-473","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17064411","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17064411","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:digibug.ugr.es:10481/77895","is_oa":true,"landing_page_url":"https://hdl.handle.net/10481/77895","pdf_url":null,"source":{"id":"https://openalex.org/S4306400567","display_name":"Institutional Repository of the University of Granada (University of Granada)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173304897","host_organization_name":"Universidad de Granada","host_organization_lineage":["https://openalex.org/I173304897"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:ad12cf8a65c743e8ac20f3e2abd481c8","is_oa":true,"landing_page_url":"https://doaj.org/article/ad12cf8a65c743e8ac20f3e2abd481c8","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 473 (2006)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1636072","is_oa":true,"landing_page_url":"http://doi.org/10.1186/1471-2105-7-473","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-473","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-473","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-473","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2841817539","display_name":"Verbundprojekt: Nationales Genomforschungsnetz, 2. Phase, SMP-Bioinformatik, Anteil DKFZ","funder_award_id":"01GR0450","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G352791218","display_name":null,"funder_award_id":"(BMBF)","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G4922664455","display_name":null,"funder_award_id":"01GR0101","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G5669308859","display_name":"Verbundprojekt: Nationales Genomforschungsnetz 2: Systematisch-Methodische Plattform \"Cell\": Standort DKFZ, Heidelberg: Systematische molekulare und zellul\u00e4re funktionelle Genomanalyse","funder_award_id":"01GR0420","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2129955304.pdf","grobid_xml":"https://content.openalex.org/works/W2129955304.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W1481094934","https://openalex.org/W1555831934","https://openalex.org/W1559459466","https://openalex.org/W1743872520","https://openalex.org/W1749816123","https://openalex.org/W1843636700","https://openalex.org/W1965074434","https://openalex.org/W1968273294","https://openalex.org/W1974092887","https://openalex.org/W1985738984","https://openalex.org/W1986234964","https://openalex.org/W1996143094","https://openalex.org/W1996423252","https://openalex.org/W2008948977","https://openalex.org/W2020336239","https://openalex.org/W2021251159","https://openalex.org/W2026726511","https://openalex.org/W2033711017","https://openalex.org/W2045830695","https://openalex.org/W2073783949","https://openalex.org/W2074328403","https://openalex.org/W2077689651","https://openalex.org/W2084748297","https://openalex.org/W2099275700","https://openalex.org/W2105545925","https://openalex.org/W2107335514","https://openalex.org/W2108222684","https://openalex.org/W2109521234","https://openalex.org/W2112240593","https://openalex.org/W2121780841","https://openalex.org/W2122289183","https://openalex.org/W2123012564","https://openalex.org/W2124126421","https://openalex.org/W2131581981","https://openalex.org/W2136145671","https://openalex.org/W2137986897","https://openalex.org/W2142292755","https://openalex.org/W2142746379","https://openalex.org/W2148252444","https://openalex.org/W2149198894","https://openalex.org/W2150934173","https://openalex.org/W2151100808","https://openalex.org/W2151971476","https://openalex.org/W2155530972","https://openalex.org/W2159129963","https://openalex.org/W2159805782","https://openalex.org/W2161136120","https://openalex.org/W2166187656","https://openalex.org/W2257633784","https://openalex.org/W2465323322","https://openalex.org/W4232543784","https://openalex.org/W4233912639","https://openalex.org/W4252940386"],"related_works":["https://openalex.org/W2156564520","https://openalex.org/W4307843054","https://openalex.org/W2104570606","https://openalex.org/W2068174058","https://openalex.org/W2093822539","https://openalex.org/W2166782903","https://openalex.org/W2013066109","https://openalex.org/W2111277734","https://openalex.org/W2144121175","https://openalex.org/W4390761624"],"abstract_inverted_index":{"CAFTAN":[0],"is":[1],"a":[2,9,25,31,44],"high-throughput":[3],"sequence":[4],"analysis":[5],"tool,":[6],"which":[7],"performs":[8],"fast":[10],"and":[11,38,56],"reliable":[12],"quality":[13,37,54],"prediction":[14],"of":[15,19,43,46,52,61],"cDNAs.":[16,47],"Several":[17],"thousands":[18],"cDNAs":[20,55],"can":[21],"be":[22],"analyzed":[23],"in":[24,58],"short":[26],"time,":[27],"giving":[28],"the":[29,36,39,50,59],"curator/scientist":[30],"first":[32],"quick":[33],"overview":[34],"about":[35],"already":[40],"existing":[41],"annotation":[42],"set":[45],"It":[48],"supports":[49],"rejection":[51],"low":[53],"helps":[57],"selection":[60],"likely":[62],"novel":[63,68],"splice":[64],"variants,":[65],"and/or":[66],"completely":[67],"transcripts":[69],"for":[70],"new":[71],"experiments.":[72]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}