{"id":"https://openalex.org/W2162401840","doi":"https://doi.org/10.1186/1471-2105-7-469","title":"Evaluating different methods of microarray data normalization","display_name":"Evaluating different methods of microarray data normalization","publication_year":2006,"publication_date":"2006-10-23","ids":{"openalex":"https://openalex.org/W2162401840","doi":"https://doi.org/10.1186/1471-2105-7-469","mag":"2162401840","pmid":"https://pubmed.ncbi.nlm.nih.gov/17059609"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-469","is_oa":true,"landing_page_url":"10.1186/1471-2105-7-469","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-469","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-469","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067767544","display_name":"Andr\u00e9 Fujita","orcid":"https://orcid.org/0000-0002-7756-7051"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Andr\u00e9 Fujita","raw_affiliation_strings":["Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010--S\u00e3o Paulo, 05508-090 SP, Brazil. fujita@ime.usp.br","Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010--S\u00e3o Paulo, 05508-090 SP, Brazil. fujita@ime.usp.br","institution_ids":["https://openalex.org/I17974374"]},{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029606860","display_name":"Jo\u00e3o Ricardo Sato","orcid":"https://orcid.org/0000-0002-7503-9781"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210092357","display_name":"Institute of Mathematics and Computer Science","ror":"https://ror.org/00fy4at53","country_code":"MD","type":"facility","lineage":["https://openalex.org/I112090838","https://openalex.org/I4210092357"]}],"countries":["BR","MD"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Ricardo Sato","raw_affiliation_strings":["Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, Brazil","Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, Brazil","institution_ids":["https://openalex.org/I4210092357"]},{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091794512","display_name":"Leonardo de Oliveira Rodrigues","orcid":"https://orcid.org/0000-0002-2739-4164"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Leonardo de Oliveira Rodrigues","raw_affiliation_strings":["Chemistry Institute, University of S\u00e3o Paulo, Av. Lineu Prestes, 748 \u2013 S\u00e3o Paulo, 05513-970, SP, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry Institute, University of S\u00e3o Paulo, Av. Lineu Prestes, 748 \u2013 S\u00e3o Paulo, 05513-970, SP, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103212438","display_name":"Carlos Eduardo Ferreira","orcid":"https://orcid.org/0000-0003-4804-5788"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210092357","display_name":"Institute of Mathematics and Computer Science","ror":"https://ror.org/00fy4at53","country_code":"MD","type":"facility","lineage":["https://openalex.org/I112090838","https://openalex.org/I4210092357"]}],"countries":["BR","MD"],"is_corresponding":false,"raw_author_name":"Carlos Eduardo Ferreira","raw_affiliation_strings":["Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, Brazil","Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, Brazil","institution_ids":["https://openalex.org/I4210092357"]},{"raw_affiliation_string":"Institute of Mathematics and Statistics, University of S\u00e3o Paulo, Rua do Mat\u00e3o, 1010 \u2013 S\u00e3o Paulo, 05508-090, SP, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036266784","display_name":"Mari Cleide Sogayar","orcid":"https://orcid.org/0000-0003-4805-4609"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Mari Cleide Sogayar","raw_affiliation_strings":["Chemistry Institute, University of S\u00e3o Paulo, Brazil","Chemistry Institute, University of S\u00e3o Paulo, Av. Lineu Prestes, 748 \u2013 S\u00e3o Paulo, 05513-970, SP, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chemistry Institute, University of S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]},{"raw_affiliation_string":"Chemistry Institute, University of S\u00e3o Paulo, Av. Lineu Prestes, 748 \u2013 S\u00e3o Paulo, 05513-970, SP, Brazil","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5067767544"],"corresponding_institution_ids":["https://openalex.org/I17974374"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.5909,"has_fulltext":true,"cited_by_count":264,"citation_normalized_percentile":{"value":0.8946142,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"7","issue":"1","first_page":"469","last_page":"469"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9714000225067139,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9714000225067139,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.005499999970197678,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.7026611566543579},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6507436633110046},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.596728503704071},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.545322835445404},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.5232523679733276},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5088024735450745},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.4697193205356598},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.36300933361053467},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33242830634117126},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3300887644290924},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1854516863822937},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.15871047973632812},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13898184895515442}],"concepts":[{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.7026611566543579},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6507436633110046},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.596728503704071},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.545322835445404},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.5232523679733276},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5088024735450745},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.4697193205356598},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.36300933361053467},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33242830634117126},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3300887644290924},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1854516863822937},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.15871047973632812},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13898184895515442},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005069","descriptor_name":"Evaluation Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005069","descriptor_name":"Evaluation Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005069","descriptor_name":"Evaluation Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012016","descriptor_name":"Reference Values","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012016","descriptor_name":"Reference Values","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012016","descriptor_name":"Reference Values","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-7-469","is_oa":true,"landing_page_url":"10.1186/1471-2105-7-469","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-469","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17059609","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17059609","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:www.producao.usp.br:BDPI/32733","is_oa":true,"landing_page_url":"http://www.producao.usp.br/handle/BDPI/32733","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da USP","raw_type":"publishedVersion"},{"id":"pmh:003029474","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-469","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da USP (Biblioteca Digital da Produ\u00e7\u00e3o Intelectual)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:1a0d058eecfe47a6ba270c75bdc34df3","is_oa":false,"landing_page_url":"https://doaj.org/article/1a0d058eecfe47a6ba270c75bdc34df3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 469 (2006)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1636075","is_oa":true,"landing_page_url":"http://doi.org/10.1186/1471-2105-7-469","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-469","is_oa":true,"landing_page_url":"10.1186/1471-2105-7-469","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-469","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320322904","display_name":"Financiadora de Estudos e Projetos","ror":"https://ror.org/030w99567"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2162401840.pdf","grobid_xml":"https://content.openalex.org/works/W2162401840.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W45534775","https://openalex.org/W56743589","https://openalex.org/W81332608","https://openalex.org/W100063776","https://openalex.org/W370143576","https://openalex.org/W588943549","https://openalex.org/W1482401268","https://openalex.org/W1489213177","https://openalex.org/W1499375494","https://openalex.org/W1516058483","https://openalex.org/W1534230820","https://openalex.org/W1542166873","https://openalex.org/W1544923801","https://openalex.org/W1570354362","https://openalex.org/W1605986903","https://openalex.org/W1707425356","https://openalex.org/W1964357740","https://openalex.org/W1971229546","https://openalex.org/W1971713783","https://openalex.org/W1995945562","https://openalex.org/W2003767009","https://openalex.org/W2004527280","https://openalex.org/W2007435914","https://openalex.org/W2010267369","https://openalex.org/W2012716786","https://openalex.org/W2033484654","https://openalex.org/W2043878573","https://openalex.org/W2063862573","https://openalex.org/W2064453154","https://openalex.org/W2065015198","https://openalex.org/W2069426496","https://openalex.org/W2071650644","https://openalex.org/W2090344516","https://openalex.org/W2093404847","https://openalex.org/W2098704098","https://openalex.org/W2100668965","https://openalex.org/W2104143846","https://openalex.org/W2131666115","https://openalex.org/W2133111499","https://openalex.org/W2142198557","https://openalex.org/W2146614932","https://openalex.org/W2148548312","https://openalex.org/W2148603752","https://openalex.org/W2156564301","https://openalex.org/W2156909104","https://openalex.org/W2162401840","https://openalex.org/W2165366028","https://openalex.org/W2211925278","https://openalex.org/W2303608025","https://openalex.org/W2603619701","https://openalex.org/W2798766386","https://openalex.org/W4231015361","https://openalex.org/W4241876622","https://openalex.org/W4243634040","https://openalex.org/W4256555983"],"related_works":["https://openalex.org/W3152114242","https://openalex.org/W2796636403","https://openalex.org/W170658859","https://openalex.org/W1547158732","https://openalex.org/W2151007749","https://openalex.org/W2028324514","https://openalex.org/W2074092657","https://openalex.org/W2490137852","https://openalex.org/W1483316219","https://openalex.org/W3023720143"],"abstract_inverted_index":{"BACKGROUND:":[0],"With":[1],"the":[2,16,53,105,128,133,142,163,179,187],"development":[3],"of":[4,19,23,25,29,34,52,160],"DNA":[5],"hybridization":[6],"microarray":[7,119,170],"technologies,":[8],"nowadays":[9],"it":[10],"is":[11,56,132,141,167],"possible":[12],"to":[13,21,45,48,59,99,136,173,178],"simultaneously":[14],"assess":[15],"expression":[17],"levels":[18,55],"thousands":[20,24],"tens":[22],"genes.":[26],"Quantitative":[27],"comparison":[28],"microarrays":[30],"uncovers":[31],"distinct":[32],"patterns":[33],"gene":[35],"expression,":[36],"which":[37,96],"define":[38],"different":[39],"cellular":[40,43],"phenotypes":[41],"or":[42],"responses":[44],"drugs.":[46],"Due":[47],"technical":[49],"biases,":[50],"normalization":[51,70,84,144,171,188],"intensity":[54],"a":[57,66],"pre-requisite":[58],"performing":[60],"further":[61],"statistical":[62],"analyses.":[63],"Therefore,":[64],"choosing":[65],"suitable":[67],"approach":[68],"for":[69,102,169,182],"can":[71],"be":[72,100],"critical,":[73],"deserving":[74],"judicious":[75],"consideration.":[76],"RESULTS:":[77],"Here,":[78],"we":[79],"considered":[80],"three":[81],"commonly":[82],"used":[83,101],"approaches,":[85],"namely:":[86],"Loess,":[87,153],"Splines":[88,154],"and":[89,91,108,121,138,155],"Wavelets,":[90],"two":[92],"non-parametric":[93],"regression":[94],"methods,":[95],"have":[97],"yet":[98],"normalization,":[103],"namely,":[104],"Kernel":[106,140],"smoothing":[107],"Support":[109,129,164],"Vector":[110,130,165],"Regression.":[111],"The":[112,124],"results":[113,125],"obtained":[114],"were":[115,150],"compared":[116,177],"using":[117],"artificial":[118],"data":[120],"benchmark":[122],"studies.":[123],"indicate":[126],"that":[127,139],"Regression":[131,166],"most":[134],"robust":[135],"outliers":[137],"worst":[143],"technique,":[145],"while":[146],"no":[147],"practical":[148],"differences":[149],"observed":[151],"between":[152],"Wavelets.":[156],"CONCLUSION:":[157],"In":[158],"face":[159],"our":[161],"results,":[162],"favored":[168],"due":[172],"its":[174,183],"superiority":[175],"when":[176],"other":[180],"methods":[181],"robustness":[184],"in":[185],"estimating":[186],"curve.":[189]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":19},{"year":2020,"cited_by_count":21},{"year":2019,"cited_by_count":38},{"year":2018,"cited_by_count":18},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":29},{"year":2014,"cited_by_count":40},{"year":2013,"cited_by_count":33},{"year":2012,"cited_by_count":6}],"updated_date":"2026-06-19T17:40:00.097472","created_date":"2025-10-10T00:00:00"}
