{"id":"https://openalex.org/W1758428313","doi":"https://doi.org/10.1186/1471-2105-7-36","title":"MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa","display_name":"MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa","publication_year":2006,"publication_date":"2006-01-24","ids":{"openalex":"https://openalex.org/W1758428313","doi":"https://doi.org/10.1186/1471-2105-7-36","mag":"1758428313","pmid":"https://pubmed.ncbi.nlm.nih.gov/16433928"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-36","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-36","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-36","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045977416","display_name":"Domenico Catalano","orcid":"https://orcid.org/0000-0001-9862-322X"},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Domenico Catalano","raw_affiliation_strings":["Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126 Bari, Italy. domenico.catalano@ba.itb.cnr.it","Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126 Bari, Italy. domenico.catalano@ba.itb.cnr.it","institution_ids":["https://openalex.org/I4210154278"]},{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044640697","display_name":"Flavio Licciulli","orcid":"https://orcid.org/0000-0002-1861-8947"},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Flavio Licciulli","raw_affiliation_strings":["Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042196579","display_name":"Antonio Turi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Antonio Turi","raw_affiliation_strings":["Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082373890","display_name":"Giorgio Grillo","orcid":"https://orcid.org/0000-0002-0137-5811"},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giorgio Grillo","raw_affiliation_strings":["Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055915244","display_name":"Cecilia Saccone","orcid":null},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Cecilia Saccone","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, University of Bari, Via Orabona 4, 70126, Bari, Italy","Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University of Bari, Via Orabona 4, 70126, Bari, Italy","institution_ids":["https://openalex.org/I5561750"]},{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009519494","display_name":"Domenica D\u2019Elia","orcid":"https://orcid.org/0000-0003-3787-3836"},"institutions":[{"id":"https://openalex.org/I4210154278","display_name":"Institute of Biomedical Technologies","ror":"https://ror.org/04ehykb85","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210154278","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Domenica D'Elia","raw_affiliation_strings":["Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Technologies, CNR, Via Amendola 122/D, 70126, Bari, Italy","institution_ids":["https://openalex.org/I4210154278"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5009519494"],"corresponding_institution_ids":["https://openalex.org/I4210154278"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.525,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.799428,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"7","issue":"1","first_page":"36","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10301","display_name":"Mitochondrial Function and Pathology","score":0.9289000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10301","display_name":"Mitochondrial Function and Pathology","score":0.9289000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.015699999406933784,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.00559999980032444,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6217346787452698},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5682560205459595},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.505751371383667},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.5013835430145264},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4934040606021881},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4838072657585144},{"id":"https://openalex.org/keywords/nuclear-gene","display_name":"Nuclear gene","score":0.474393367767334},{"id":"https://openalex.org/keywords/biogenesis","display_name":"Biogenesis","score":0.46320948004722595},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4435465335845947},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.36939239501953125},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.33471858501434326},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.22955089807510376}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6217346787452698},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5682560205459595},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.505751371383667},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.5013835430145264},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4934040606021881},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4838072657585144},{"id":"https://openalex.org/C20750100","wikidata":"https://www.wikidata.org/wiki/Q7068120","display_name":"Nuclear gene","level":4,"score":0.474393367767334},{"id":"https://openalex.org/C131934819","wikidata":"https://www.wikidata.org/wiki/Q135390","display_name":"Biogenesis","level":3,"score":0.46320948004722595},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4435465335845947},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.36939239501953125},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.33471858501434326},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.22955089807510376},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000852","descriptor_name":"Anopheles","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000852","descriptor_name":"Anopheles","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000852","descriptor_name":"Anopheles","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004330","descriptor_name":"Drosophila","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004330","descriptor_name":"Drosophila","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004330","descriptor_name":"Drosophila","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-7-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-36","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-36","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16433928","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16433928","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:49d89de53512428298b9a137e33e7b37","is_oa":true,"landing_page_url":"https://doaj.org/article/49d89de53512428298b9a137e33e7b37","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 36 (2006)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:137791","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1395343","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1395343","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1395343","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-36","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-36","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7","score":0.5199999809265137}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1758428313.pdf","grobid_xml":"https://content.openalex.org/works/W1758428313.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1527927437","https://openalex.org/W1965682152","https://openalex.org/W2011001101","https://openalex.org/W2014047570","https://openalex.org/W2028170564","https://openalex.org/W2066285332","https://openalex.org/W2072603644","https://openalex.org/W2079167667","https://openalex.org/W2092454702","https://openalex.org/W2096525273","https://openalex.org/W2101119157","https://openalex.org/W2113515610","https://openalex.org/W2131581981","https://openalex.org/W2154139219","https://openalex.org/W2158714788","https://openalex.org/W2165270659","https://openalex.org/W2166834940","https://openalex.org/W4230903726","https://openalex.org/W4285719527","https://openalex.org/W6682489755"],"related_works":["https://openalex.org/W3138117676","https://openalex.org/W2581212852","https://openalex.org/W4285133528","https://openalex.org/W3122598549","https://openalex.org/W4404511434","https://openalex.org/W1864022620","https://openalex.org/W3092268165","https://openalex.org/W2175953840","https://openalex.org/W4213365651","https://openalex.org/W4229585093"],"abstract_inverted_index":{"BACKGROUND:":[0],"Mitochondria":[1],"are":[2],"sub-cellular":[3],"organelles":[4],"that":[5],"have":[6],"a":[7,35,92,187],"central":[8],"role":[9],"in":[10,14,53,126,250,269,300],"energy":[11],"production":[12],"and":[13,30,57,72,88,131,153,161,171,182,202,211,222,225,232,241,266,275,288,308,317,326],"other":[15],"metabolic":[16],"pathways":[17],"of":[18,38,55,63,79,83,86,114,120,149,198,218,227,272,277,290,304,311],"all":[19],"eukaryotic":[20],"respiring":[21],"cells.":[22],"In":[23,74],"the":[24,49,61,77,80,111,121,196,216,219,223,270,286,293,297,301,309,312],"last":[25],"few":[26],"years,":[27],"with":[28,60,110,205],"more":[29,31],"genomes":[32],"being":[33],"sequenced,":[34],"huge":[36],"amount":[37],"data":[39,90,129,136,150],"has":[40,259],"been":[41,260],"generated":[42],"providing":[43],"an":[44,118],"unprecedented":[45],"opportunity":[46],"to":[47,246,262,295],"use":[48,303],"comparative":[50],"analysis":[51],"approach":[52],"studies":[54],"evolution":[56,276],"functional":[58],"genomics":[59],"aim":[62],"shedding":[64],"light":[65],"on":[66,137,195],"molecular":[67,273],"mechanisms":[68],"regulating":[69],"mitochondrial":[70,105,278],"biogenesis":[71],"metabolism.":[73],"this":[75,147],"context,":[76],"problem":[78],"optimal":[81],"extraction":[82,170,224,289],"representative":[84],"datasets":[85,158],"genomic":[87,206],"proteomic":[89],"assumes":[91],"crucial":[93],"importance.":[94],"Specialised":[95],"resources":[96,307],"for":[97,141,145,168,249,285],"nuclear-encoded":[98,138],"mitochondria-related":[99,139],"proteins":[100,194],"already":[101],"exist;":[102],"however,":[103],"no":[104],"database":[106,123,220],"is":[107,117,151],"currently":[108],"available":[109,152],"same":[112],"features":[113,274],"MitoRes,":[115],"which":[116,146],"update":[119],"MitoNuc":[122],"extensively":[124],"modified":[125],"its":[127],"structure,":[128],"sources":[130,181],"graphical":[132],"interface.":[133],"It":[134],"contains":[135],"products":[140],"any":[142],"metazoan":[143],"species":[144],"type":[148],"also":[154,192],"provides":[155,284],"comprehensive":[156],"sequence":[157,200,212,313],"(gene,":[159,229,324],"transcript":[160,325],"protein)":[162,231],"as":[163,165],"well":[164],"useful":[166],"tools":[167,214],"their":[169,199],"export.":[172],"DESCRIPTION:":[173],"MitoRes":[174],"http://www2.ba.itb.cnr.it/MitoRes/":[175],"consolidates":[176],"information":[177],"from":[178],"publicly":[179],"external":[180],"automatically":[183],"annotates":[184],"them":[185,204],"into":[186],"relational":[188],"database.":[189],"Additionally,":[190],"it":[191,283],"clusters":[193],"basis":[197],"similarity":[201],"interconnects":[203],"data.":[207],"The":[208,254,281],"search":[209],"engine":[210],"management":[213],"allow":[215],"query/retrieval":[217],"content":[221],"export":[226],"sequences":[228,291],"transcript,":[230],"related":[233],"sub-sequences":[234],"(intron,":[235],"exon,":[236],"UTR,":[237],"CDS,":[238],"signal":[239],"peptide":[240],"gene":[242],"flanking":[243],"regions)":[244],"ready":[245],"be":[247],"used":[248],"silico":[251],"analysis.":[252],"CONCLUSION:":[253],"tool":[255],"we":[256],"describe":[257],"here":[258],"developed":[261],"support":[263],"lab":[264],"scientists":[265],"bioinformaticians":[267],"alike":[268],"characterization":[271],"targeting":[279],"sequences.":[280],"way":[282],"retrieval":[287],"allows":[292,315],"user":[294],"overcome":[296],"obstacles":[298],"encountered":[299],"integrative":[302],"different":[305,321],"bioinformatic":[306],"completeness":[310],"collection":[314],"intra-":[316],"interspecies":[318],"comparison":[319],"at":[320],"biological":[322],"levels":[323],"protein).":[327]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
