{"id":"https://openalex.org/W2110754033","doi":"https://doi.org/10.1186/1471-2105-7-311","title":"Web-based analysis of the mouse transcriptome using Genevestigator","display_name":"Web-based analysis of the mouse transcriptome using Genevestigator","publication_year":2006,"publication_date":"2006-06-21","ids":{"openalex":"https://openalex.org/W2110754033","doi":"https://doi.org/10.1186/1471-2105-7-311","mag":"2110754033","pmid":"https://pubmed.ncbi.nlm.nih.gov/16790046"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-311","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-311","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-311","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-311","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009051445","display_name":"Oliver Laule","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Oliver Laule","raw_affiliation_strings":["Institute of Plant Sciences, ETH Zurich, 8092 Zurich, Switzerland. ola@ethz.ch","Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Plant Sciences, ETH Zurich, 8092 Zurich, Switzerland. ola@ethz.ch","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010478977","display_name":"Matthias Hirsch\u2010Hoffmann","orcid":"https://orcid.org/0000-0002-4802-754X"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Matthias Hirsch-Hoffmann","raw_affiliation_strings":["Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036740744","display_name":"Tom\u00e1\u0161 Hr\u00faz","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Tomas Hruz","raw_affiliation_strings":["Institute of Theoretical Computer Science, ETH Zurich, 8092, Zurich, Switzerland","Institute of Theoretical Computer Science, ETH Z\u00fcrich, Z\u00fcrich, Switzerland#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Theoretical Computer Science, ETH Zurich, 8092, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Institute of Theoretical Computer Science, ETH Z\u00fcrich, Z\u00fcrich, Switzerland#TAB#","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006955632","display_name":"Wilhelm Gruissem","orcid":"https://orcid.org/0000-0002-1872-2998"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Wilhelm Gruissem","raw_affiliation_strings":["Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023866862","display_name":"Philip Zimmermann","orcid":"https://orcid.org/0000-0002-9488-1341"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Philip Zimmermann","raw_affiliation_strings":["Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Plant Sciences, ETH Zurich, 8092, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Institute of Plant Sciences, ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5023866862"],"corresponding_institution_ids":["https://openalex.org/I35440088"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.7804,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.83613455,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"7","issue":"1","first_page":"311","last_page":"311"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5874999761581421,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5874999761581421,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.3614000082015991,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.013000000268220901,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7712105512619019},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6910268068313599},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6170989871025085},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5243342518806458},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.4669519364833832},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.45432913303375244},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.45303356647491455},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4528650641441345},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4395091235637665},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36659881472587585},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3617711365222931},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3192049264907837},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23578804731369019},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23428550362586975},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.18398332595825195},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12848851084709167},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0943867564201355},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.08304277062416077}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7712105512619019},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6910268068313599},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6170989871025085},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5243342518806458},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.4669519364833832},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.45432913303375244},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.45303356647491455},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4528650641441345},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4395091235637665},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36659881472587585},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3617711365222931},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3192049264907837},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23578804731369019},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23428550362586975},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.18398332595825195},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12848851084709167},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0943867564201355},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.08304277062416077},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/1471-2105-7-311","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-311","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-311","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16790046","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16790046","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/149415","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/149415","pdf_url":"http://hdl.handle.net/20.500.11850/149415","source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/report"},{"id":"pmh:oai:europepmc.org:338207","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1533866","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:4a92f64a3c574691b73954d0f47d9ef7","is_oa":false,"landing_page_url":"https://doaj.org/article/4a92f64a3c574691b73954d0f47d9ef7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 311 (2006)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1533866","is_oa":true,"landing_page_url":"http://doi.org/10.1186/1471-2105-7-311","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/286995","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/286995","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 7","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.3929/ethz-a-005223242","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-a-005223242","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-311","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-311","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-311","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321652","display_name":"Eidgen\u00f6ssische Technische Hochschule Z\u00fcrich","ror":"https://ror.org/05a28rw58"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2110754033.pdf","grobid_xml":"https://content.openalex.org/works/W2110754033.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W636264593","https://openalex.org/W1505782191","https://openalex.org/W1544923801","https://openalex.org/W1545704211","https://openalex.org/W1749848231","https://openalex.org/W1969408132","https://openalex.org/W1975431633","https://openalex.org/W1977722786","https://openalex.org/W1989071778","https://openalex.org/W1994190762","https://openalex.org/W1994357518","https://openalex.org/W2004537703","https://openalex.org/W2021432006","https://openalex.org/W2043204829","https://openalex.org/W2043372546","https://openalex.org/W2044770199","https://openalex.org/W2052565759","https://openalex.org/W2059344357","https://openalex.org/W2066965390","https://openalex.org/W2080415201","https://openalex.org/W2080634281","https://openalex.org/W2093968919","https://openalex.org/W2096451658","https://openalex.org/W2100471807","https://openalex.org/W2100479207","https://openalex.org/W2101042770","https://openalex.org/W2129397426","https://openalex.org/W2129501942","https://openalex.org/W2150534781","https://openalex.org/W2152101492","https://openalex.org/W2157649587","https://openalex.org/W2160697532","https://openalex.org/W2161398974","https://openalex.org/W2161920970","https://openalex.org/W2167829409","https://openalex.org/W2167980479","https://openalex.org/W2170970288","https://openalex.org/W4240605225"],"related_works":["https://openalex.org/W2901823680","https://openalex.org/W2059565715","https://openalex.org/W1999129612","https://openalex.org/W2116418175","https://openalex.org/W2009940763","https://openalex.org/W2126804125","https://openalex.org/W2946410450","https://openalex.org/W4361192415","https://openalex.org/W2137318037","https://openalex.org/W4386637333"],"abstract_inverted_index":{"BACKGROUND:":[0],"Gene":[1],"function":[2],"analysis":[3,70],"often":[4],"requires":[5],"a":[6,66,143],"complex":[7],"and":[8,13,49,69,91,99,127,168],"laborious":[9],"sequence":[10],"of":[11,36,135,145,154],"laboratory":[12],"computer-based":[14],"experiments.":[15],"Choosing":[16],"an":[17,114],"effective":[18],"experimental":[19],"design":[20],"generally":[21],"results":[22,136,167],"from":[23,26,33,105],"hypotheses":[24,55],"derived":[25],"prior":[27],"knowledge":[28],"or":[29,131],"experimentation.":[30],"Knowledge":[31],"obtained":[32,137],"meta-analyzing":[34],"compendia":[35],"expression":[37],"data":[38],"with":[39,81],"annotation":[40,115],"libraries":[41],"can":[42,57,110,169],"provide":[43],"significant":[44],"clues":[45],"in":[46,53,60,156],"understanding":[47],"gene":[48],"network":[50],"function,":[51],"resulting":[52],"better":[54],"that":[56,148],"be":[58,111,170],"tested":[59],"the":[61,157],"laboratory.":[62],"DESCRIPTION:":[63],"Genevestigator":[64,139],"is":[65,140],"microarray":[67],"database":[68,162],"system":[71],"allowing":[72],"context-driven":[73],"queries.":[74],"Simple":[75],"but":[76],"powerful":[77],"tools":[78],"allow":[79],"biologists":[80],"little":[82],"computational":[83],"background":[84],"to":[85],"retrieve":[86],"information":[87],"about":[88],"when,":[89],"where":[90],"how":[92],"genes":[93],"are":[94,149],"expressed.":[95],"We":[96],"manually":[97],"curated":[98],"quality-controlled":[100],"3110":[101],"mouse":[102],"Affymetrix":[103],"arrays":[104],"public":[106],"repositories.":[107],"Data":[108],"queries":[109],"run":[112],"against":[113],"library":[116],"comprising":[117],"160":[118],"anatomy":[119],"categories,":[120],"12":[121],"developmental":[122],"stage":[123],"groups,":[124],"80":[125],"stimuli,":[126],"182":[128],"genetic":[129],"backgrounds":[130],"modifications.":[132],"The":[133,160],"quality":[134],"through":[138],"illustrated":[141],"by":[142,151],"number":[144],"biological":[146],"scenarios":[147],"substantiated":[150],"other":[152],"types":[153],"experimentation":[155],"literature.":[158],"CONCLUSION:":[159],"Genevestigator-Mouse":[161],"effectively":[163],"provides":[164],"biologically":[165],"meaningful":[166],"accessed":[171],"at":[172],"https://www.genevestigator.ethz.ch.":[173]},"counts_by_year":[{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}