{"id":"https://openalex.org/W1885831658","doi":"https://doi.org/10.1186/1471-2105-7-223","title":"Support vector machine for classification of meiotic recombination hotspots and coldspots in Saccharomyces cerevisiae based on codon composition","display_name":"Support vector machine for classification of meiotic recombination hotspots and coldspots in Saccharomyces cerevisiae based on codon composition","publication_year":2006,"publication_date":"2006-04-26","ids":{"openalex":"https://openalex.org/W1885831658","doi":"https://doi.org/10.1186/1471-2105-7-223","mag":"1885831658","pmid":"https://pubmed.ncbi.nlm.nih.gov/16640774"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-223","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-223","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-223","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-223","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055436613","display_name":"Tong Zhou","orcid":"https://orcid.org/0000-0003-2361-1931"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Zhou","raw_affiliation_strings":["State Key Laboratory of Bioelectronics, Southeast University, Nanjing 210096, China. tzhou@seu.edu.cn","State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing 210096, China. tzhou@seu.edu.cn","institution_ids":["https://openalex.org/I76569877"]},{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060364332","display_name":"Jianhong Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianhong Weng","raw_affiliation_strings":["State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","institution_ids":["https://openalex.org/I76569877"]},{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082259816","display_name":"Xiao Sun","orcid":"https://orcid.org/0000-0003-1048-7775"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao Sun","raw_affiliation_strings":["State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","institution_ids":["https://openalex.org/I76569877"]},{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100388707","display_name":"Zuhong Lu","orcid":"https://orcid.org/0000-0003-3332-2615"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zuhong Lu","raw_affiliation_strings":["State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, 210096, China","institution_ids":["https://openalex.org/I76569877"]},{"raw_affiliation_string":"State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5100388707"],"corresponding_institution_ids":["https://openalex.org/I76569877"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.2542,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.53374105,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"7","issue":"1","first_page":"223","last_page":"223"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.8568999767303467,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.8568999767303467,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.02419999986886978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10123","display_name":"DNA Repair Mechanisms","score":0.01549999974668026,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/orfs","display_name":"ORFS","score":0.9663597345352173},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5914930105209351},{"id":"https://openalex.org/keywords/codon-usage-bias","display_name":"Codon usage bias","score":0.5830827951431274},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5416967272758484},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.5041126012802124},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.481354296207428},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.46706968545913696},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.30757978558540344},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.2070346176624298},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.1579144299030304}],"concepts":[{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.9663597345352173},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5914930105209351},{"id":"https://openalex.org/C87253356","wikidata":"https://www.wikidata.org/wiki/Q1106472","display_name":"Codon usage bias","level":4,"score":0.5830827951431274},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5416967272758484},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.5041126012802124},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.481354296207428},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.46706968545913696},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.30757978558540344},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.2070346176624298},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.1579144299030304}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003062","descriptor_name":"Codon","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003062","descriptor_name":"Codon","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003062","descriptor_name":"Codon","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008540","descriptor_name":"Meiosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011995","descriptor_name":"Recombination, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011995","descriptor_name":"Recombination, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011995","descriptor_name":"Recombination, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-7-223","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-223","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-223","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16640774","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16640774","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:5c350929424a466fb4c78754c704dd19","is_oa":true,"landing_page_url":"https://doaj.org/article/5c350929424a466fb4c78754c704dd19","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 223 (2006)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:262505","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1463011","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1463011","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1463011","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-223","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-223","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-223","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10","score":0.6800000071525574}],"awards":[{"id":"https://openalex.org/G4004976805","display_name":null,"funder_award_id":"60121101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1885831658.pdf","grobid_xml":"https://content.openalex.org/works/W1885831658.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1603411458","https://openalex.org/W1876019739","https://openalex.org/W1925508000","https://openalex.org/W1977566832","https://openalex.org/W1994099983","https://openalex.org/W1996050521","https://openalex.org/W2008963437","https://openalex.org/W2013097516","https://openalex.org/W2018590530","https://openalex.org/W2020194549","https://openalex.org/W2042782470","https://openalex.org/W2051043527","https://openalex.org/W2071771941","https://openalex.org/W2082605863","https://openalex.org/W2086683522","https://openalex.org/W2086756781","https://openalex.org/W2090293826","https://openalex.org/W2092435376","https://openalex.org/W2115733831","https://openalex.org/W2118834362","https://openalex.org/W2138790911","https://openalex.org/W2144668992","https://openalex.org/W2148603752","https://openalex.org/W2152812151","https://openalex.org/W2162154860","https://openalex.org/W2167277498","https://openalex.org/W2274856807"],"related_works":["https://openalex.org/W2039410154","https://openalex.org/W2051856433","https://openalex.org/W2140948740","https://openalex.org/W1976390578","https://openalex.org/W2552089663","https://openalex.org/W2048688848","https://openalex.org/W2037527629","https://openalex.org/W1978033184","https://openalex.org/W2070116684","https://openalex.org/W1997395408"],"abstract_inverted_index":{"BACKGROUND:":[0],"Meiotic":[1],"double-strand":[2],"breaks":[3],"occur":[4],"at":[5],"relatively":[6,15],"high":[7,88,253],"frequencies":[8,17],"in":[9,18,28,64,69,270],"some":[10],"genomic":[11],"regions":[12],"(hotspots)":[13],"and":[14,22,39,60,66,103,207,219,225,275],"low":[16],"others":[19],"(coldspots).":[20],"Hotspots":[21],"coldspots":[23,40,67],"are":[24],"receiving":[25],"increasing":[26],"attention":[27],"research":[29],"into":[30],"the":[31,108,156,161,165,177,217,223,271],"mechanism":[32],"of":[33,58,91,99,110,114,171,179,211,273],"meiotic":[34,204],"recombination.":[35],"However,":[36],"predicting":[37,183,193],"hotspots":[38,65],"from":[41,121,164,240],"DNA":[42],"sequence":[43,115,247,268],"information":[44],"is":[45,96,186],"still":[46],"a":[47,53,87,97,200,232,252],"challenging":[48],"task.":[49],"RESULTS:":[50],"We":[51,159,174,229],"present":[52],"novel":[54,234],"method":[55,84,152,181,235],"for":[56,182,192],"classification":[57,89,254],"hot":[59,119,194,224,238,274],"cold":[61,122,184,226,241,276],"ORFs":[62,120,123,163,185,239],"located":[63],"respectively":[68],"Saccharomyces":[70],"cerevisiae,":[71],"using":[72,169],"support":[73],"vector":[74],"machine":[75],"(SVM),":[76],"which":[77,214,256],"relies":[78],"on":[79],"codon":[80,94,100,133,146,244,259],"composition":[81,95,106,139,210,245,260],"differences.":[82],"This":[83],"has":[85,261],"achieved":[86,251],"accuracy":[90],"85.0%.":[92],"Since":[93],"fusion":[98],"usage":[101,134],"bias":[102,135],"amino":[104,137,208],"acid":[105,138,209],"signals,":[107],"ability":[109],"these":[111],"two":[112],"kinds":[113],"attributes":[116,269],"to":[117,155,236,264],"discriminate":[118,237],"was":[124,153],"also":[125,198],"investigated":[126],"separately.":[127],"Our":[128],"results":[129],"indicate":[130],"that":[131,176,191,258],"neither":[132],"nor":[136],"taken":[140],"separately":[141],"performed":[142],"as":[143,145,188,190,246,267],"well":[144],"composition.":[147],"Moreover,":[148],"our":[149,180],"SVM":[150],"based":[151],"applied":[154],"full":[157],"genome:":[158],"predicted":[160],"hot/cold":[162],"yeast":[166],"genome":[167],"by":[168],"cutoffs":[170],"recombination":[172,205],"rate.":[173],"found":[175],"performance":[178],"not":[187],"good":[189],"ORFs.":[195,277],"Besides,":[196],"we":[197,249],"observed":[199],"considerable":[201],"correlation":[202],"between":[203,222],"rate":[206],"certain":[212],"residues,":[213],"probably":[215],"reflects":[216],"structural":[218],"functional":[220],"dissimilarity":[221],"groups.":[227],"CONCLUSION:":[228],"have":[230,250],"introduced":[231],"SVM-based":[233],"ones.":[242],"Applying":[243],"attributes,":[248],"accuracy,":[255],"suggests":[257],"strong":[262],"potential":[263],"be":[265],"used":[266],"prediction":[272]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
